| Literature DB >> 21587625 |
J Emery Brown1, Russell G Baughman.
Abstract
In the title compound, C(12)H(13)NO(4)S, a systemic fungicide, the heterocycle adopts a lounge chair conformation and the dihedral angle between the ring planes is 25.8 (2)°. Inter-molecular C-H⋯O hydrogen bonds are noted in the crystal structure. Also observed is a short inter-action of a methyl-ene hydrogen atom with the π-electron system of a phenyl ring in an adjacent mol-ecule.Entities:
Year: 2010 PMID: 21587625 PMCID: PMC2983306 DOI: 10.1107/S1600536810037669
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H13NO4S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 100 reflections | |
| θ = 10.7–18.8° | |
| µ = 0.28 mm−1 | |
| α = 104.702 (4)° | |
| β = 93.180 (5)° | Parrallelepiped, colorless |
| γ = 106.876 (5)° | 0.54 × 0.44 × 0.16 mm |
| Bruker P4 diffractometer | 1884 reflections with |
| Radiation source: normal-focus sealed tube | |
| graphite | θmax = 25.3°, θmin = 2.7° |
| θ/2θ scans | |
| Absorption correction: integration ( | |
| 2152 measured reflections | 3 standard reflections every 100 reflections |
| 2152 independent reflections | intensity decay: 1.2% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H-atom parameters constrained | |
| 2152 reflections | (Δ/σ)max < 0.001 |
| 165 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
| 51 constraints |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.86650 (16) | 0.76152 (12) | 0.09237 (7) | 0.0340 (3) | |
| O1 | 1.3241 (5) | 0.9576 (4) | 0.2477 (2) | 0.0476 (7) | |
| O2 | 0.7405 (5) | 0.8747 (4) | 0.0705 (3) | 0.0533 (8) | |
| O3 | 0.7619 (5) | 0.5767 (4) | 0.0397 (2) | 0.0455 (7) | |
| O4 | 0.7181 (5) | 0.7679 (4) | 0.3786 (2) | 0.0483 (7) | |
| N1 | 0.5358 (5) | 0.5725 (4) | 0.2219 (2) | 0.0377 (7) | |
| H1A | 0.5393 | 0.5414 | 0.1546 | 0.045* | |
| C1 | 1.2901 (7) | 0.9966 (5) | 0.1490 (4) | 0.0467 (10) | |
| H1B | 1.4418 | 1.0488 | 0.1291 | 0.056* | |
| H1C | 1.2046 | 1.0808 | 0.1576 | 0.056* | |
| C2 | 1.1548 (7) | 0.8332 (5) | 0.0621 (3) | 0.0379 (9) | |
| H2A | 1.2291 | 0.7431 | 0.0584 | 0.045* | |
| H2B | 1.1517 | 0.8584 | −0.0060 | 0.045* | |
| C3 | 0.9171 (6) | 0.7890 (5) | 0.2294 (3) | 0.0318 (8) | |
| C4 | 1.1355 (7) | 0.8708 (5) | 0.2853 (3) | 0.0386 (9) | |
| C5 | 1.2078 (8) | 0.8729 (7) | 0.3958 (3) | 0.0520 (11) | |
| H5A | 1.3705 | 0.8796 | 0.4045 | 0.078* | |
| H5B | 1.1134 | 0.7677 | 0.4095 | 0.078* | |
| H5C | 1.1861 | 0.9727 | 0.4449 | 0.078* | |
| C6 | 0.7168 (6) | 0.7096 (5) | 0.2834 (3) | 0.0344 (8) | |
| C7 | 0.3405 (7) | 0.4774 (5) | 0.2627 (3) | 0.0339 (8) | |
| C8 | 0.3722 (8) | 0.4250 (6) | 0.3528 (3) | 0.0459 (10) | |
| H8 | 0.5224 | 0.4541 | 0.3891 | 0.055* | |
| C9 | 0.1786 (9) | 0.3287 (6) | 0.3887 (4) | 0.0555 (12) | |
| H9 | 0.1990 | 0.2953 | 0.4502 | 0.067* | |
| C10 | −0.0441 (9) | 0.2821 (6) | 0.3339 (4) | 0.0574 (12) | |
| H10 | −0.1735 | 0.2167 | 0.3577 | 0.069* | |
| C11 | −0.0730 (8) | 0.3329 (6) | 0.2440 (4) | 0.0508 (11) | |
| H11 | −0.2229 | 0.3012 | 0.2068 | 0.061* | |
| C12 | 0.1177 (7) | 0.4309 (5) | 0.2077 (3) | 0.0375 (8) | |
| H12 | 0.0960 | 0.4652 | 0.1467 | 0.045* |
| S1 | 0.0286 (5) | 0.0390 (5) | 0.0340 (5) | 0.0066 (4) | 0.0065 (4) | 0.0136 (4) |
| O1 | 0.0300 (14) | 0.0505 (17) | 0.0492 (17) | 0.0020 (12) | 0.0030 (12) | 0.0044 (14) |
| O2 | 0.0463 (17) | 0.071 (2) | 0.0596 (19) | 0.0272 (16) | 0.0125 (14) | 0.0363 (17) |
| O3 | 0.0411 (15) | 0.0447 (16) | 0.0344 (14) | −0.0056 (12) | 0.0054 (12) | 0.0049 (12) |
| O4 | 0.0473 (17) | 0.0546 (18) | 0.0334 (15) | 0.0067 (14) | 0.0095 (12) | 0.0059 (13) |
| N1 | 0.0374 (17) | 0.0426 (18) | 0.0281 (15) | 0.0051 (14) | 0.0082 (13) | 0.0091 (13) |
| C1 | 0.038 (2) | 0.036 (2) | 0.059 (3) | 0.0018 (17) | 0.0134 (19) | 0.0106 (19) |
| C2 | 0.034 (2) | 0.035 (2) | 0.043 (2) | 0.0063 (16) | 0.0153 (16) | 0.0115 (16) |
| C3 | 0.0314 (18) | 0.0325 (18) | 0.0314 (18) | 0.0101 (15) | 0.0059 (15) | 0.0086 (15) |
| C4 | 0.036 (2) | 0.036 (2) | 0.041 (2) | 0.0123 (16) | 0.0089 (16) | 0.0028 (16) |
| C5 | 0.043 (2) | 0.068 (3) | 0.038 (2) | 0.019 (2) | −0.0017 (18) | 0.002 (2) |
| C6 | 0.0335 (19) | 0.0348 (19) | 0.035 (2) | 0.0106 (16) | 0.0060 (15) | 0.0103 (16) |
| C7 | 0.038 (2) | 0.0308 (18) | 0.0303 (18) | 0.0076 (15) | 0.0073 (15) | 0.0068 (15) |
| C8 | 0.045 (2) | 0.052 (2) | 0.037 (2) | 0.0065 (19) | 0.0042 (18) | 0.0171 (18) |
| C9 | 0.070 (3) | 0.052 (3) | 0.040 (2) | 0.005 (2) | 0.016 (2) | 0.021 (2) |
| C10 | 0.058 (3) | 0.050 (3) | 0.057 (3) | 0.002 (2) | 0.027 (2) | 0.017 (2) |
| C11 | 0.039 (2) | 0.044 (2) | 0.059 (3) | 0.0048 (19) | 0.008 (2) | 0.007 (2) |
| C12 | 0.040 (2) | 0.0339 (19) | 0.0351 (19) | 0.0086 (16) | 0.0053 (16) | 0.0072 (16) |
| S1—O2 | 1.438 (3) | C3—C6 | 1.501 (5) |
| S1—O3 | 1.445 (3) | C4—C5 | 1.486 (6) |
| S1—C3 | 1.754 (4) | C5—H5A | 0.9600 |
| S1—C2 | 1.761 (4) | C5—H5B | 0.9600 |
| O1—C4 | 1.346 (5) | C5—H5C | 0.9600 |
| O1—C1 | 1.432 (5) | C7—C12 | 1.382 (5) |
| O4—C6 | 1.220 (4) | C7—C8 | 1.383 (5) |
| N1—C6 | 1.359 (5) | C8—C9 | 1.388 (6) |
| N1—C7 | 1.425 (5) | C8—H8 | 0.9300 |
| N1—H1A | 0.8600 | C9—C10 | 1.380 (7) |
| C1—C2 | 1.509 (5) | C9—H9 | 0.9300 |
| C1—H1B | 0.9700 | C10—C11 | 1.369 (7) |
| C1—H1C | 0.9700 | C10—H10 | 0.9300 |
| C2—H2A | 0.9700 | C11—C12 | 1.385 (6) |
| C2—H2B | 0.9700 | C11—H11 | 0.9300 |
| C3—C4 | 1.357 (5) | C12—H12 | 0.9300 |
| O2—S1—O3 | 116.48 (19) | C4—C5—H5A | 109.5 |
| O2—S1—C3 | 110.85 (18) | C4—C5—H5B | 109.5 |
| O3—S1—C3 | 108.26 (17) | H5A—C5—H5B | 109.5 |
| O2—S1—C2 | 108.98 (18) | C4—C5—H5C | 109.5 |
| O3—S1—C2 | 109.37 (18) | H5A—C5—H5C | 109.5 |
| C3—S1—C2 | 101.89 (18) | H5B—C5—H5C | 109.5 |
| C4—O1—C1 | 118.9 (3) | O4—C6—N1 | 122.0 (3) |
| C6—N1—C7 | 123.8 (3) | O4—C6—C3 | 120.6 (3) |
| C6—N1—H1A | 118.1 | N1—C6—C3 | 117.4 (3) |
| C7—N1—H1A | 118.1 | C12—C7—C8 | 120.1 (4) |
| O1—C1—C2 | 111.0 (3) | C12—C7—N1 | 118.7 (3) |
| O1—C1—H1B | 109.4 | C8—C7—N1 | 121.2 (4) |
| C2—C1—H1B | 109.4 | C7—C8—C9 | 119.6 (4) |
| O1—C1—H1C | 109.4 | C7—C8—H8 | 120.2 |
| C2—C1—H1C | 109.4 | C9—C8—H8 | 120.2 |
| H1B—C1—H1C | 108.0 | C10—C9—C8 | 120.4 (4) |
| C1—C2—S1 | 107.8 (3) | C10—C9—H9 | 119.8 |
| C1—C2—H2A | 110.2 | C8—C9—H9 | 119.8 |
| S1—C2—H2A | 110.2 | C11—C10—C9 | 119.4 (4) |
| C1—C2—H2B | 110.2 | C11—C10—H10 | 120.3 |
| S1—C2—H2B | 110.2 | C9—C10—H10 | 120.3 |
| H2A—C2—H2B | 108.5 | C10—C11—C12 | 121.0 (4) |
| C4—C3—C6 | 120.0 (3) | C10—C11—H11 | 119.5 |
| C4—C3—S1 | 121.1 (3) | C12—C11—H11 | 119.5 |
| C6—C3—S1 | 118.8 (3) | C7—C12—C11 | 119.5 (4) |
| O1—C4—C3 | 125.3 (4) | C7—C12—H12 | 120.3 |
| O1—C4—C5 | 109.0 (3) | C11—C12—H12 | 120.3 |
| C3—C4—C5 | 125.7 (4) | ||
| C4—O1—C1—C2 | −53.6 (5) | C7—N1—C6—O4 | −4.3 (6) |
| O1—C1—C2—S1 | 67.6 (4) | C7—N1—C6—C3 | 176.2 (3) |
| O2—S1—C2—C1 | 74.7 (3) | C4—C3—C6—O4 | 27.4 (5) |
| O3—S1—C2—C1 | −157.0 (3) | S1—C3—C6—O4 | −156.6 (3) |
| C3—S1—C2—C1 | −42.6 (3) | C4—C3—C6—N1 | −153.1 (4) |
| O2—S1—C3—C4 | −108.1 (3) | S1—C3—C6—N1 | 22.9 (5) |
| O3—S1—C3—C4 | 123.0 (3) | C6—N1—C7—C12 | 138.0 (4) |
| C2—S1—C3—C4 | 7.8 (4) | C6—N1—C7—C8 | −44.9 (6) |
| O2—S1—C3—C6 | 76.0 (3) | C12—C7—C8—C9 | −1.3 (6) |
| O3—S1—C3—C6 | −52.9 (3) | N1—C7—C8—C9 | −178.4 (4) |
| C2—S1—C3—C6 | −168.2 (3) | C7—C8—C9—C10 | 1.3 (7) |
| C1—O1—C4—C3 | 12.1 (6) | C8—C9—C10—C11 | −0.6 (7) |
| C1—O1—C4—C5 | −170.3 (3) | C9—C10—C11—C12 | −0.3 (7) |
| C6—C3—C4—O1 | −174.9 (3) | C8—C7—C12—C11 | 0.5 (6) |
| S1—C3—C4—O1 | 9.2 (5) | N1—C7—C12—C11 | 177.6 (4) |
| C6—C3—C4—C5 | 7.9 (6) | C10—C11—C12—C7 | 0.3 (6) |
| S1—C3—C4—C5 | −168.0 (3) |
| Cg is the centroid of the C7–C12 ring. |
| H··· | ||||
| N1—H1A···O3 | 0.86 | 2.09 | 2.819 (4) | 142 |
| C2—H2B···O2i | 0.97 | 2.50 | 3.274 (5) | 137 |
| C5—H5A···O4ii | 0.96 | 2.52 | 3.422 (6) | 157 |
| C5—H5B···O4 | 0.96 | 2.37 | 2.786 (6) | 106 |
| C8—H8···O4 | 0.93 | 2.58 | 2.926 (5) | 103 |
| C9—H9···O4iii | 0.93 | 2.49 | 3.419 (5) | 175 |
| C1—H1C···Cgiv | 0.97 | 2.82 | 3.645 | 144 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the C7–C12 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.09 | 2.819 (4) | 142 |
| C2—H2 | 0.97 | 2.50 | 3.274 (5) | 137 |
| C5—H5 | 0.96 | 2.52 | 3.422 (6) | 157 |
| C9—H9⋯O4iii | 0.93 | 2.49 | 3.419 (5) | 175 |
| C1—H1 | 0.97 | 2.82 | 3.645 | 144 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .