Literature DB >> 21587606

3-(tert-But-oxy-carbon-yl)-2-(4-chloro-phen-yl)-1,3-thia-zolidine-4-carb-oxy-lic acid.

Zhong-Cheng Song1, Hai-Liang Zhu, Shu-Min Ding.   

Abstract

In the title compound, C(15)H(18)ClNO(4)S, the thia-zolidine ring adopts a twisted conformation about the S-C(methyl-ene) bond. The dihedral angle between the five- and six-membered rings is 77.2 (3)°. In the crystal, the mol-ecules are linked by O-H⋯O hydrogen bonds, generating C(7) chains propagating in [100].

Entities:  

Year:  2010        PMID: 21587606      PMCID: PMC2983415          DOI: 10.1107/S1600536810037396

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the biological properties of the title compound, see: Lu et al. (2010 ▶); Song et al. (2009 ▶). For reference bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C15H18ClNO4S M = 343.81 Monoclinic, a = 6.4600 (13) Å b = 10.641 (2) Å c = 12.411 (3) Å β = 94.52 (3)° V = 850.5 (3) Å3 Z = 2 Mo Kα radiation μ = 0.36 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.899, T max = 0.965 1638 measured reflections 1638 independent reflections 1363 reflections with I > 2σ(I) 200 standard reflections every 3 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.062 wR(F 2) = 0.159 S = 1.08 1638 reflections 185 parameters 89 restraints H-atom parameters constrained Δρmax = 0.43 e Å−3 Δρmin = −0.37 e Å−3 Absolute structure: Flack (1983 ▶) Flack parameter: −0.09 (19) Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810037396/hb5637sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810037396/hb5637Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H18ClNO4SF(000) = 360
Mr = 343.81Dx = 1.343 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 25 reflections
a = 6.4600 (13) Åθ = 9–12°
b = 10.641 (2) ŵ = 0.36 mm1
c = 12.411 (3) ÅT = 293 K
β = 94.52 (3)°Block, colorless
V = 850.5 (3) Å30.30 × 0.20 × 0.10 mm
Z = 2
Enraf–Nonius CAD-4 diffractometer1363 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.0000
graphiteθmax = 25.3°, θmin = 1.7°
ω/2θ scanh = −7→7
Absorption correction: ψ scan (North et al., 1968)k = 0→12
Tmin = 0.899, Tmax = 0.965l = 0→14
1638 measured reflections200 standard reflections every 3 reflections
1638 independent reflections intensity decay: 1%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.062H-atom parameters constrained
wR(F2) = 0.159w = 1/[σ2(Fo2) + (0.0649P)2 + 1.2912P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
1638 reflectionsΔρmax = 0.43 e Å3
185 parametersΔρmin = −0.37 e Å3
89 restraintsAbsolute structure: Flack (1983)
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.09 (19)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3575 (11)0.4607 (7)0.7980 (6)0.0457 (16)
H10.47760.49840.77680.055*
C20.3229 (12)0.3336 (8)0.7816 (6)0.0519 (17)
H20.41830.28630.74650.062*
C30.1505 (12)0.2766 (8)0.8162 (7)0.0555 (18)
C40.0021 (13)0.3440 (8)0.8654 (6)0.0585 (18)
H4−0.11630.30540.88790.070*
C50.0368 (11)0.4720 (7)0.8800 (6)0.0492 (16)
H5−0.06040.51950.91360.059*
C60.2109 (9)0.5308 (6)0.8464 (5)0.0349 (13)
C70.2361 (9)0.6677 (6)0.8692 (4)0.0358 (13)
H70.10360.70230.88870.043*
C80.4770 (9)0.8351 (7)0.8161 (5)0.0409 (14)
H80.43640.91650.78420.049*
O10.8408 (8)0.8639 (5)0.8109 (4)0.060
C90.4827 (11)0.8471 (7)0.9375 (5)0.0494 (16)
H9A0.37600.90430.95830.059*
H9B0.61700.87740.96710.059*
C100.6910 (9)0.8031 (8)0.7835 (5)0.0459 (17)
C110.2163 (9)0.7473 (7)0.6838 (5)0.0373 (14)
C120.2095 (11)0.8500 (8)0.5098 (5)0.0520 (18)
C130.2564 (14)0.7386 (9)0.4443 (8)0.070
H13A0.39990.71610.45860.106*
H13B0.22930.75790.36900.106*
H13C0.17050.66950.46290.106*
C14−0.0195 (13)0.8803 (9)0.4998 (8)0.069
H14A−0.09750.80560.51230.104*
H14B−0.05830.91170.42860.104*
H14C−0.04830.94290.55230.104*
C150.3316 (15)0.9649 (10)0.4750 (7)0.078 (3)
H15A0.29431.03710.51560.116*
H15B0.29920.98020.39930.116*
H15C0.47770.94920.48830.116*
Cl10.1156 (5)0.1156 (2)0.7961 (2)0.0908 (9)
N10.3167 (7)0.7456 (5)0.7848 (4)0.0336 (11)
O20.6980 (6)0.7001 (6)0.7256 (4)0.0534 (12)
H2A0.81850.68580.71310.080*
O30.0721 (6)0.6749 (5)0.6573 (3)0.0398 (10)
O40.2916 (7)0.8324 (5)0.6216 (3)0.0448 (11)
S10.4357 (3)0.68989 (18)0.98363 (12)0.0481 (5)
U11U22U33U12U13U23
C10.047 (4)0.049 (3)0.041 (4)0.001 (3)0.003 (3)0.001 (3)
C20.059 (4)0.055 (4)0.041 (4)0.010 (3)0.001 (3)−0.006 (3)
C30.064 (4)0.047 (4)0.053 (4)−0.006 (3)−0.014 (3)0.007 (3)
C40.060 (4)0.057 (4)0.058 (4)−0.014 (3)0.004 (3)0.004 (4)
C50.046 (3)0.056 (4)0.045 (4)−0.004 (3)0.003 (3)0.011 (3)
C60.039 (3)0.035 (3)0.031 (3)0.000 (2)0.002 (2)0.008 (3)
C70.035 (3)0.043 (4)0.030 (3)0.005 (3)0.003 (2)0.006 (3)
C80.042 (3)0.038 (3)0.042 (3)0.001 (3)−0.004 (3)0.001 (3)
O10.0600.0600.0600.0000.0050.000
C90.052 (4)0.052 (4)0.043 (3)0.008 (3)−0.006 (3)−0.009 (3)
C100.026 (3)0.074 (5)0.037 (3)−0.015 (3)−0.006 (2)−0.002 (3)
C110.028 (3)0.053 (4)0.031 (3)0.009 (3)−0.002 (2)−0.002 (3)
C120.050 (4)0.070 (5)0.035 (3)−0.008 (4)−0.003 (3)0.019 (4)
C130.0700.0700.0700.0000.0060.000
C140.0700.0700.0700.0000.0060.000
C150.086 (6)0.085 (7)0.061 (5)−0.007 (5)0.006 (4)0.036 (5)
Cl10.115 (2)0.0475 (12)0.1032 (19)−0.0122 (13)−0.0338 (16)0.0021 (13)
N10.030 (2)0.038 (3)0.033 (2)0.004 (2)0.0010 (19)0.001 (2)
O20.032 (2)0.066 (3)0.064 (3)−0.010 (2)0.012 (2)−0.018 (3)
O30.029 (2)0.058 (3)0.0317 (19)−0.007 (2)−0.0026 (15)−0.005 (2)
O40.044 (2)0.055 (3)0.035 (2)−0.015 (2)0.0001 (18)0.016 (2)
S10.0578 (10)0.0564 (10)0.0285 (7)−0.0005 (9)−0.0071 (6)−0.0025 (9)
C1—C61.379 (9)C9—H9A0.9700
C1—C21.384 (11)C9—H9B0.9700
C1—H10.9300C10—O21.313 (9)
C2—C31.367 (11)C11—O31.234 (8)
C2—H20.9300C11—O41.308 (8)
C3—C41.378 (12)C11—N11.365 (8)
C3—Cl11.744 (8)C12—O41.457 (8)
C4—C51.390 (11)C12—C131.483 (12)
C4—H40.9300C12—C141.510 (11)
C5—C61.380 (9)C12—C151.535 (11)
C5—H50.9300C13—H13A0.9600
C6—C71.490 (9)C13—H13B0.9600
C7—N11.464 (8)C13—H13C0.9600
C7—S11.857 (6)C14—H14A0.9600
C7—H70.9800C14—H14B0.9600
C8—N11.437 (8)C14—H14C0.9600
C8—C101.510 (9)C15—H15A0.9600
C8—C91.510 (9)C15—H15B0.9600
C8—H80.9800C15—H15C0.9600
O1—C101.191 (8)O2—H2A0.8200
C9—S11.801 (8)
C6—C1—C2119.0 (7)O1—C10—O2123.2 (6)
C6—C1—H1120.5O1—C10—C8122.8 (7)
C2—C1—H1120.5O2—C10—C8114.0 (5)
C3—C2—C1120.9 (7)O3—C11—O4125.6 (5)
C3—C2—H2119.6O3—C11—N1122.1 (6)
C1—C2—H2119.6O4—C11—N1112.3 (5)
C2—C3—C4121.4 (8)O4—C12—C13110.1 (7)
C2—C3—Cl1119.4 (7)O4—C12—C14112.7 (6)
C4—C3—Cl1119.2 (7)C13—C12—C14111.5 (7)
C3—C4—C5117.2 (8)O4—C12—C15102.4 (6)
C3—C4—H4121.4C13—C12—C15110.5 (6)
C5—C4—H4121.4C14—C12—C15109.2 (7)
C6—C5—C4122.2 (8)C12—C13—H13A109.5
C6—C5—H5118.9C12—C13—H13B109.5
C4—C5—H5118.9H13A—C13—H13B109.5
C1—C6—C5119.3 (6)C12—C13—H13C109.5
C1—C6—C7122.9 (6)H13A—C13—H13C109.5
C5—C6—C7117.8 (6)H13B—C13—H13C109.5
N1—C7—C6117.2 (5)C12—C14—H14A109.5
N1—C7—S1102.2 (4)C12—C14—H14B109.5
C6—C7—S1109.2 (4)H14A—C14—H14B109.5
N1—C7—H7109.3C12—C14—H14C109.5
C6—C7—H7109.3H14A—C14—H14C109.5
S1—C7—H7109.3H14B—C14—H14C109.5
N1—C8—C10115.7 (6)C12—C15—H15A109.5
N1—C8—C9106.7 (5)C12—C15—H15B109.5
C10—C8—C9109.6 (5)H15A—C15—H15B109.5
N1—C8—H8108.2C12—C15—H15C109.5
C10—C8—H8108.2H15A—C15—H15C109.5
C9—C8—H8108.2H15B—C15—H15C109.5
C8—C9—S1104.3 (5)C11—N1—C8121.3 (5)
C8—C9—H9A110.9C11—N1—C7119.6 (5)
S1—C9—H9A110.9C8—N1—C7118.1 (5)
C8—C9—H9B110.9C10—O2—H2A109.5
S1—C9—H9B110.9C11—O4—C12121.8 (5)
H9A—C9—H9B108.9C9—S1—C790.0 (3)
C6—C1—C2—C3−2.5 (11)O3—C11—N1—C8−176.7 (6)
C1—C2—C3—C42.1 (12)O4—C11—N1—C83.6 (8)
C1—C2—C3—Cl1−178.8 (6)O3—C11—N1—C7−8.1 (9)
C2—C3—C4—C5−1.1 (11)O4—C11—N1—C7172.2 (5)
Cl1—C3—C4—C5179.8 (6)C10—C8—N1—C11−83.3 (7)
C3—C4—C5—C60.5 (11)C9—C8—N1—C11154.5 (5)
C2—C1—C6—C51.9 (10)C10—C8—N1—C7107.9 (6)
C2—C1—C6—C7178.9 (6)C9—C8—N1—C7−14.2 (7)
C4—C5—C6—C1−0.9 (10)C6—C7—N1—C1156.7 (7)
C4—C5—C6—C7−178.1 (6)S1—C7—N1—C11176.0 (4)
C1—C6—C7—N142.7 (8)C6—C7—N1—C8−134.4 (6)
C5—C6—C7—N1−140.2 (6)S1—C7—N1—C8−15.1 (6)
C1—C6—C7—S1−72.7 (7)O3—C11—O4—C12−0.4 (10)
C5—C6—C7—S1104.3 (6)N1—C11—O4—C12179.3 (6)
N1—C8—C9—S137.6 (6)C13—C12—O4—C11−67.2 (8)
C10—C8—C9—S1−88.4 (6)C14—C12—O4—C1158.1 (10)
N1—C8—C10—O1−174.4 (6)C15—C12—O4—C11175.3 (6)
C9—C8—C10—O1−53.8 (9)C8—C9—S1—C7−40.6 (5)
N1—C8—C10—O23.4 (8)N1—C7—S1—C931.7 (4)
C9—C8—C10—O2124.0 (6)C6—C7—S1—C9156.5 (5)
D—H···AD—HH···AD···AD—H···A
O2—H2A···O3i0.821.832.638 (6)167
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2A⋯O3i0.821.832.638 (6)167

Symmetry code: (i) .

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