Literature DB >> 21587604

2-(1,3-Dioxoisoindolin-2-yl)acetonitrile.

Younas Aouine, Anouar Alami, Abdelilah El Hallaoui, Abdelrhani Elachqar, Hafid Zouihri.   

Abstract

The asymmetric unit of the title compound, C(10)H(6)N(2)O(2), contains two independent mol-ecules. The dihedral angles between the acetonitrile and the 1H-isoindole-1,3(2H)-dione units are 69.0 (7)° and 77.0 (5)° in the two mol-ecules. One of the two terminal N atoms is disordered over two positions in a 0.66 (8):0,34 (8) ratio. In the crystal structure, the mol-ecules are linked by inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21587604      PMCID: PMC2983393          DOI: 10.1107/S1600536810037335

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound was prepared as a key intermediate for the synthesis of a new new tetrazolic derivative. For the use of tetra­zoles as pesticides, see: Schocken et al. (1989 ▶); Yanagi et al. (2001 ▶); Lim et al. (2007 ▶) and as anti­hypertensive, anti­alergic, anti­biotic and anti­convulsant agents, see: Hashimoto et al. (1998 ▶); Berghmans et al. (2007 ▶). For their use in cancer, AIDS and obesity treatments, see: Tamura et al. (1998 ▶); Shih et al. (1999 ▶); Muraglia et al. (2006 ▶). A major advantage of tetra­zoles over carb­oxy­lic acids is that they are resistant to many biological metabolic degradation pathways, see: Singh et al. (1980 ▶).

Experimental

Crystal data

C10H6N2O2 M = 186.17 Triclinic, a = 8.0960 (2) Å b = 8.4371 (2) Å c = 14.3118 (3) Å α = 85.072 (1)° β = 79.272 (1)° γ = 68.421 (1)° V = 893.02 (4) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.25 × 0.24 × 0.16 mm

Data collection

Bruker APEXII CCD detector diffractometer 18332 measured reflections 3906 independent reflections 2885 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.128 S = 1.05 3906 reflections 267 parameters 6 restraints H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810037335/jh2206sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810037335/jh2206Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report Enhanced figure: interactive version of Fig. 3
C10H6N2O2Z = 4
Mr = 186.17F(000) = 384
Triclinic, P1Dx = 1.385 Mg m3
Hall symbol: -P 1Melting point: 395 K
a = 8.0960 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.4371 (2) ÅCell parameters from 2714 reflections
c = 14.3118 (3) Åθ = 2.7–25.3°
α = 85.072 (1)°µ = 0.10 mm1
β = 79.272 (1)°T = 296 K
γ = 68.421 (1)°Block, colourless
V = 893.02 (4) Å30.25 × 0.24 × 0.16 mm
Bruker APEXII CCD detector diffractometer2885 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.034
graphiteθmax = 27.0°, θmin = 1.5°
ω and φ scansh = −10→10
18332 measured reflectionsk = −10→10
3906 independent reflectionsl = −17→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0697P)2 + 0.070P] where P = (Fo2 + 2Fc2)/3
3906 reflections(Δ/σ)max = 0.005
267 parametersΔρmax = 0.19 e Å3
6 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C110.73565 (18)0.39842 (17)0.04371 (10)0.0471 (3)
C160.75085 (18)0.49910 (17)−0.03635 (10)0.0461 (3)
C100.7395 (2)0.48752 (18)0.12747 (11)0.0497 (3)
C170.7711 (2)0.65409 (18)−0.00671 (11)0.0527 (4)
C180.7772 (2)0.76260 (19)0.15037 (12)0.0582 (4)
H18A0.83600.83270.11120.070*
H18B0.85030.70490.19840.070*
C150.7474 (2)0.4505 (2)−0.12523 (12)0.0612 (4)
H150.75590.5195−0.17880.073*
C140.7309 (2)0.2948 (2)−0.13128 (13)0.0685 (5)
H140.72910.2577−0.19030.082*
C190.5995 (3)0.8711 (2)0.19668 (15)0.0745 (5)
C120.7182 (3)0.2438 (2)0.03696 (14)0.0670 (5)
H120.70750.17540.09060.080*
C130.7170 (3)0.1937 (2)−0.05234 (15)0.0750 (5)
H130.70650.0893−0.05890.090*
C200.91639 (18)0.46404 (18)0.38170 (10)0.0462 (3)
C260.72827 (18)0.4498 (2)0.52338 (10)0.0495 (3)
C210.78905 (18)0.56105 (19)0.46334 (10)0.0472 (3)
C270.81143 (19)0.2782 (2)0.48113 (11)0.0512 (4)
C281.0390 (2)0.1584 (2)0.33559 (12)0.0598 (4)
H28A1.12020.07410.37270.072*
H28B1.11140.20150.28570.072*
C220.7336 (2)0.7317 (2)0.48390 (12)0.0600 (4)
H220.77400.80680.44330.072*
C290.9423 (2)0.0764 (2)0.29222 (14)0.0661 (5)
C230.6146 (2)0.7856 (2)0.56814 (14)0.0715 (5)
H230.57440.89960.58430.086*
C250.6098 (2)0.5045 (3)0.60702 (12)0.0640 (4)
H250.56860.42970.64750.077*
C240.5549 (2)0.6749 (3)0.62815 (13)0.0725 (5)
H240.47580.71540.68420.087*
O110.72249 (19)0.44907 (16)0.21083 (8)0.0739 (4)
O120.7926 (2)0.77161 (16)−0.05386 (10)0.0863 (4)
O201.00395 (15)0.51155 (14)0.31593 (8)0.0613 (3)
O210.79522 (16)0.14499 (15)0.50949 (9)0.0727 (4)
N110.76467 (16)0.63694 (14)0.09160 (9)0.0497 (3)
N210.92041 (16)0.29721 (15)0.39635 (8)0.0494 (3)
N220.8731 (3)0.0080 (2)0.25846 (16)0.1020 (7)
N12A0.4599 (15)0.972 (4)0.222 (2)0.100 (4)0.66 (8)
N12B0.466 (4)0.916 (6)0.252 (3)0.085 (6)0.34 (8)
U11U22U33U12U13U23
C110.0471 (8)0.0391 (7)0.0555 (8)−0.0166 (6)−0.0054 (6)−0.0037 (6)
C160.0411 (7)0.0434 (7)0.0506 (8)−0.0148 (6)0.0017 (6)−0.0064 (6)
C100.0539 (8)0.0439 (8)0.0529 (9)−0.0215 (6)−0.0049 (6)−0.0009 (6)
C170.0550 (8)0.0447 (8)0.0597 (9)−0.0227 (7)−0.0037 (7)0.0018 (7)
C180.0611 (9)0.0469 (8)0.0728 (10)−0.0233 (7)−0.0141 (8)−0.0108 (7)
C150.0567 (9)0.0693 (10)0.0519 (9)−0.0200 (8)0.0035 (7)−0.0102 (8)
C140.0631 (10)0.0669 (11)0.0705 (11)−0.0135 (8)−0.0062 (8)−0.0307 (9)
C190.0700 (12)0.0728 (12)0.0872 (14)−0.0258 (10)−0.0134 (10)−0.0353 (10)
C120.0875 (12)0.0422 (8)0.0784 (12)−0.0294 (8)−0.0189 (9)0.0008 (8)
C130.0835 (12)0.0453 (9)0.1006 (15)−0.0209 (9)−0.0214 (11)−0.0213 (9)
C200.0446 (7)0.0517 (8)0.0462 (8)−0.0201 (6)−0.0124 (6)0.0007 (6)
C260.0418 (7)0.0632 (9)0.0449 (8)−0.0185 (7)−0.0123 (6)0.0011 (7)
C210.0432 (7)0.0540 (8)0.0462 (8)−0.0167 (6)−0.0127 (6)−0.0035 (6)
C270.0455 (8)0.0578 (9)0.0532 (8)−0.0209 (7)−0.0143 (6)0.0073 (7)
C280.0518 (9)0.0554 (9)0.0701 (10)−0.0151 (7)−0.0088 (8)−0.0125 (8)
C220.0573 (9)0.0558 (9)0.0674 (10)−0.0164 (7)−0.0166 (8)−0.0072 (8)
C290.0628 (10)0.0485 (9)0.0830 (12)−0.0116 (8)−0.0123 (9)−0.0185 (8)
C230.0590 (10)0.0699 (11)0.0766 (12)−0.0041 (8)−0.0181 (9)−0.0257 (10)
C250.0492 (9)0.0898 (13)0.0496 (9)−0.0219 (8)−0.0069 (7)−0.0001 (8)
C240.0517 (9)0.0973 (15)0.0572 (10)−0.0114 (9)−0.0049 (8)−0.0202 (10)
O110.1064 (10)0.0764 (8)0.0524 (7)−0.0494 (8)−0.0150 (6)0.0068 (6)
O120.1289 (12)0.0668 (8)0.0810 (9)−0.0601 (8)−0.0181 (8)0.0195 (7)
O200.0651 (7)0.0686 (7)0.0530 (6)−0.0320 (6)−0.0011 (5)0.0014 (5)
O210.0695 (7)0.0627 (7)0.0869 (9)−0.0291 (6)−0.0133 (6)0.0184 (6)
N110.0584 (7)0.0396 (6)0.0556 (7)−0.0229 (5)−0.0072 (6)−0.0052 (5)
N210.0499 (7)0.0496 (7)0.0498 (7)−0.0186 (5)−0.0072 (5)−0.0065 (5)
N220.0928 (13)0.0766 (11)0.1438 (18)−0.0253 (10)−0.0265 (12)−0.0498 (12)
N12A0.078 (2)0.098 (7)0.114 (8)−0.013 (4)−0.013 (4)−0.048 (7)
N12B0.079 (5)0.081 (10)0.088 (10)−0.020 (6)0.005 (5)−0.040 (7)
C11—C121.376 (2)C20—N211.3944 (18)
C11—C161.381 (2)C20—C211.481 (2)
C11—C101.480 (2)C26—C211.380 (2)
C16—C151.378 (2)C26—C251.381 (2)
C16—C171.482 (2)C26—C271.482 (2)
C10—O111.2052 (18)C21—C221.382 (2)
C10—N111.3903 (18)C27—O211.2066 (17)
C17—O121.1989 (18)C27—N211.3958 (19)
C17—N111.395 (2)C28—N211.4445 (19)
C18—N111.4511 (18)C28—C291.460 (2)
C18—C191.458 (2)C28—H28A0.9700
C18—H18A0.9700C28—H28B0.9700
C18—H18B0.9700C22—C231.388 (2)
C15—C141.380 (2)C22—H220.9300
C15—H150.9300C29—N221.125 (2)
C14—C131.369 (3)C23—C241.372 (3)
C14—H140.9300C23—H230.9300
C12—C131.383 (3)C25—C241.383 (3)
C12—H120.9300C25—H250.9300
C13—H130.9300C24—H240.9300
C20—O201.2021 (17)
C12—C11—C16120.65 (14)C21—C26—C27108.31 (13)
C12—C11—C10130.71 (15)C25—C26—C27130.42 (15)
C16—C11—C10108.64 (12)C26—C21—C22121.60 (14)
C15—C16—C11121.80 (13)C26—C21—C20108.40 (13)
C15—C16—C17130.20 (14)C22—C21—C20129.99 (14)
C11—C16—C17108.00 (13)O21—C27—N21124.00 (15)
O11—C10—N11123.96 (14)O21—C27—C26130.39 (15)
O11—C10—C11130.57 (14)N21—C27—C26105.61 (12)
N11—C10—C11105.46 (12)N21—C28—C29112.91 (13)
O12—C17—N11124.60 (15)N21—C28—H28A109.0
O12—C17—C16129.75 (15)C29—C28—H28A109.0
N11—C17—C16105.63 (12)N21—C28—H28B109.0
N11—C18—C19111.30 (13)C29—C28—H28B109.0
N11—C18—H18A109.4H28A—C28—H28B107.8
C19—C18—H18A109.4C21—C22—C23116.75 (17)
N11—C18—H18B109.4C21—C22—H22121.6
C19—C18—H18B109.4C23—C22—H22121.6
H18A—C18—H18B108.0N22—C29—C28177.51 (18)
C16—C15—C14117.07 (16)C24—C23—C22121.71 (17)
C16—C15—H15121.5C24—C23—H23119.1
C14—C15—H15121.5C22—C23—H23119.1
C13—C14—C15121.47 (16)C26—C25—C24117.30 (17)
C13—C14—H14119.3C26—C25—H25121.4
C15—C14—H14119.3C24—C25—H25121.4
C11—C12—C13117.66 (16)C23—C24—C25121.36 (16)
C11—C12—H12121.2C23—C24—H24119.3
C13—C12—H12121.2C25—C24—H24119.3
C14—C13—C12121.34 (16)C10—N11—C17112.21 (12)
C14—C13—H13119.3C10—N11—C18123.66 (13)
C12—C13—H13119.3C17—N11—C18124.11 (12)
O20—C20—N21124.84 (14)C20—N21—C27112.00 (12)
O20—C20—C21129.50 (14)C20—N21—C28123.18 (12)
N21—C20—C21105.65 (12)C27—N21—C28124.49 (13)
C21—C26—C25121.28 (15)
D—H···AD—HH···AD···AD—H···A
C13—H13···O12i0.932.513.386 (2)158
C15—H15···O20ii0.932.453.144 (2)132
C18—H18B···O200.972.423.372 (2)167
C28—H28A···O21iii0.972.393.298 (2)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C13—H13⋯O12i0.932.513.386 (2)158
C15—H15⋯O20ii0.932.453.144 (2)132
C18—H18B⋯O200.972.423.372 (2)167
C28—H28A⋯O21iii0.972.393.298 (2)156

Symmetry codes: (i) ; (ii) ; (iii) .

  9 in total

1.  L-770,644: a potent and selective human beta3 adrenergic receptor agonist with improved oral bioavailability.

Authors:  T L Shih; M R Candelore; M A Cascieri; S H Chiu; L F Colwell; L Deng; W P Feeney; M J Forrest; G J Hom; D E MacIntyre; R R Miller; R A Stearns; C D Strader; L Tota; M J Wyvratt; M H Fisher; A E Weber
Journal:  Bioorg Med Chem Lett       Date:  1999-05-03       Impact factor: 2.823

2.  Microbial transformation of the tetrazolinone herbicide f5231.

Authors:  M J Schocken; R W Creekmore; G Theodoridis; G J Nystrom; R A Robinson
Journal:  Appl Environ Microbiol       Date:  1989-05       Impact factor: 4.792

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Pharmacologic profile of TA-606, a novel angiotensin II-receptor antagonist in the rat.

Authors:  Y Hashimoto; R Ohashi; Y Kurosawa; K Minami; H Kaji; K Hayashida; H Narita; S Murata
Journal:  J Cardiovasc Pharmacol       Date:  1998-04       Impact factor: 3.105

5.  Highly selective and orally active inhibitors of type IV collagenase (MMP-9 and MMP-2): N-sulfonylamino acid derivatives.

Authors:  Y Tamura; F Watanabe; T Nakatani; K Yasui; M Fuji; T Komurasaki; H Tsuzuki; R Maekawa; T Yoshioka; K Kawada; K Sugita; M Ohtani
Journal:  J Med Chem       Date:  1998-02-12       Impact factor: 7.446

6.  Tetrazole thioacetanilides: potent non-nucleoside inhibitors of WT HIV reverse transcriptase and its K103N mutant.

Authors:  Ester Muraglia; Olaf D Kinzel; Ralph Laufer; Michael D Miller; Gregory Moyer; Vandna Munshi; Federica Orvieto; Maria Cecilia Palumbi; Giovanna Pescatore; Michael Rowley; Peter D Williams; Vincenzo Summa
Journal:  Bioorg Med Chem Lett       Date:  2006-02-28       Impact factor: 2.823

Review 7.  Medicinal chemistry of tetrazoles.

Authors:  H Singh; A S Chawla; V K Kapoor; D Paul; R K Malhotra
Journal:  Prog Med Chem       Date:  1980

8.  Zebrafish offer the potential for a primary screen to identify a wide variety of potential anticonvulsants.

Authors:  Stephane Berghmans; Julia Hunt; Alan Roach; Paul Goldsmith
Journal:  Epilepsy Res       Date:  2007-05-07       Impact factor: 3.045

9.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  9 in total

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