Literature DB >> 21587586

4-[(2-Hy-droxy-5-nitro-benzyl-idene)amino]-benzene-sulfonamide.

Yi-Han Tan, Siang Guan Teoh, Wan-Sin Loh, Hoong-Kun Fun.   

Abstract

The title Schiff base compound, C(13)n class="Species">H(11)N(3)O(5)S, exists in an E configuration with respect to the C=N double bond. The benzene rings are almost coplanar, making a dihedral angle of 2.82 (6). The sulfonamide group is twisted away from the attached phenyl ring with an N-S-C-C torsion angle of 64.84 (11)°. An intra-molecular O-H⋯N hydrogen bond stabilizes the mol-ecule, generating an S(6) ring motif. In the crystal, inter-molecular N-H⋯O and C-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional network.

Entities:  

Year:  2010        PMID: 21587586      PMCID: PMC2983168          DOI: 10.1107/S1600536810036949

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background and the biological activity of sulfonamide and its derivatives, see: Kremer et al. (2006 ▶); Chumakov et al. (2006 ▶); Mohamed & Sharaby (2007 ▶); Wang et al. (2010 ▶); Sharaby (2007 ▶); Aziz-ur-Rehman et al. (2010 ▶); Subashini et al. (2009 ▶); Loughrey et al. (2009 ▶). For a related structure, see: Fun et al. (2010 ▶). For bond-length data, see: Allen et al. (1987 ▶). For n class="Chemical">hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C13H11N3O5S M = 321.31 Monoclinic, a = 6.7698 (1) Å b = 26.4754 (3) Å c = 9.9683 (1) Å β = 131.544 (1)° V = 1337.21 (3) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 100 K 0.41 × 0.27 × 0.06 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.896, T max = 0.985 29377 measured reflections 4825 independent reflections 4104 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.110 S = 1.06 4825 reflections 211 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.60 e Å−3 Δρmin = −0.43 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810036949/sj5036sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810036949/sj5036Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H11N3O5SF(000) = 664
Mr = 321.31Dx = 1.596 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9950 reflections
a = 6.7698 (1) Åθ = 2.8–35.5°
b = 26.4754 (3) ŵ = 0.27 mm1
c = 9.9683 (1) ÅT = 100 K
β = 131.544 (1)°Plate, orange
V = 1337.21 (3) Å30.41 × 0.27 × 0.06 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer4825 independent reflections
Radiation source: fine-focus sealed tube4104 reflections with I > 2σ(I)
graphiteRint = 0.031
φ and ω scansθmax = 32.5°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −10→10
Tmin = 0.896, Tmax = 0.985k = −40→36
29377 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0528P)2 + 0.7191P] where P = (Fo2 + 2Fc2)/3
4825 reflections(Δ/σ)max = 0.002
211 parametersΔρmax = 0.60 e Å3
0 restraintsΔρmin = −0.43 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.25811 (6)0.770137 (11)0.29838 (4)0.01433 (8)
O10.69814 (19)1.06412 (4)0.38905 (13)0.01833 (18)
O21.2322 (2)1.14670 (4)0.11034 (15)0.0251 (2)
O31.1687 (2)1.06896 (4)0.02207 (13)0.0217 (2)
O40.46897 (19)0.73446 (4)0.38253 (15)0.0264 (2)
O50.1385 (2)0.77870 (4)0.37367 (14)0.0243 (2)
N10.6474 (2)0.97162 (4)0.29501 (13)0.01443 (19)
N20.0283 (2)0.75128 (4)0.09717 (14)0.01538 (19)
N31.1534 (2)1.10368 (4)0.09747 (14)0.0166 (2)
C10.8033 (2)1.07306 (5)0.31518 (15)0.0146 (2)
C20.8745 (2)1.12251 (5)0.31389 (16)0.0169 (2)
H2A0.84291.14870.35990.020*
C30.9919 (2)1.13262 (5)0.24433 (16)0.0167 (2)
H3A1.04121.16540.24420.020*
C41.0352 (2)1.09290 (5)0.17442 (15)0.0142 (2)
C50.9623 (2)1.04378 (5)0.17048 (15)0.0146 (2)
H5A0.99131.01810.12150.018*
C60.8442 (2)1.03309 (5)0.24119 (15)0.0139 (2)
C70.7632 (2)0.98178 (5)0.23515 (16)0.0158 (2)
H7A0.79490.95610.18790.019*
C80.5618 (2)0.92230 (5)0.29004 (15)0.0135 (2)
C90.4354 (2)0.91795 (5)0.35687 (16)0.0152 (2)
H9A0.41300.94650.40000.018*
C100.3425 (2)0.87159 (5)0.35986 (16)0.0158 (2)
H10A0.25830.86890.40450.019*
C110.3773 (2)0.82917 (5)0.29516 (15)0.0139 (2)
C120.5046 (2)0.83273 (5)0.22825 (16)0.0163 (2)
H12A0.52800.80400.18620.020*
C130.5958 (2)0.87914 (5)0.22483 (16)0.0164 (2)
H13A0.67920.88180.17960.020*
H2N20.074 (4)0.7439 (7)0.041 (3)0.028 (5)*
H1N2−0.119 (4)0.7655 (8)0.038 (3)0.030 (5)*
H1O10.655 (5)1.0290 (11)0.368 (4)0.068 (8)*
U11U22U33U12U13U23
S10.01492 (14)0.01229 (14)0.01464 (13)−0.00158 (10)0.00933 (11)0.00082 (9)
O10.0243 (5)0.0160 (5)0.0229 (4)0.0000 (4)0.0191 (4)−0.0007 (3)
O20.0303 (5)0.0155 (5)0.0373 (5)−0.0009 (4)0.0257 (5)0.0052 (4)
O30.0270 (5)0.0219 (5)0.0227 (4)−0.0038 (4)0.0192 (4)−0.0036 (4)
O40.0152 (4)0.0161 (5)0.0320 (5)0.0019 (4)0.0090 (4)0.0079 (4)
O50.0372 (6)0.0225 (5)0.0267 (5)−0.0090 (4)0.0268 (5)−0.0048 (4)
N10.0162 (4)0.0123 (5)0.0157 (4)−0.0014 (4)0.0110 (4)−0.0003 (3)
N20.0137 (4)0.0156 (5)0.0161 (4)−0.0005 (4)0.0096 (4)−0.0019 (4)
N30.0167 (5)0.0155 (5)0.0175 (4)0.0006 (4)0.0112 (4)0.0032 (4)
C10.0147 (5)0.0149 (5)0.0142 (4)0.0010 (4)0.0096 (4)0.0005 (4)
C20.0200 (5)0.0117 (5)0.0197 (5)0.0014 (4)0.0134 (5)−0.0002 (4)
C30.0170 (5)0.0134 (5)0.0181 (5)0.0001 (4)0.0110 (5)0.0010 (4)
C40.0148 (5)0.0132 (5)0.0146 (5)−0.0003 (4)0.0098 (4)0.0011 (4)
C50.0179 (5)0.0118 (5)0.0154 (5)−0.0005 (4)0.0116 (4)−0.0002 (4)
C60.0165 (5)0.0118 (5)0.0143 (4)−0.0007 (4)0.0105 (4)−0.0006 (4)
C70.0195 (5)0.0134 (5)0.0171 (5)−0.0009 (4)0.0132 (5)−0.0005 (4)
C80.0136 (5)0.0122 (5)0.0137 (4)−0.0007 (4)0.0087 (4)−0.0002 (4)
C90.0183 (5)0.0127 (5)0.0185 (5)−0.0005 (4)0.0138 (5)−0.0016 (4)
C100.0173 (5)0.0158 (6)0.0178 (5)−0.0015 (4)0.0132 (5)−0.0012 (4)
C110.0143 (5)0.0129 (5)0.0139 (4)−0.0017 (4)0.0091 (4)−0.0005 (4)
C120.0196 (5)0.0138 (5)0.0187 (5)−0.0021 (4)0.0140 (5)−0.0030 (4)
C130.0202 (5)0.0146 (6)0.0199 (5)−0.0020 (4)0.0157 (5)−0.0022 (4)
S1—O41.4301 (10)C3—C41.3958 (17)
S1—O51.4408 (10)C3—H3A0.9300
S1—N21.5980 (11)C4—C51.3822 (17)
S1—C111.7689 (12)C5—C61.4014 (15)
O1—C11.3417 (14)C5—H5A0.9300
O1—H1O10.96 (3)C6—C71.4513 (17)
O2—N31.2278 (14)C7—H7A0.9300
O3—N31.2345 (14)C8—C91.3951 (15)
N1—C71.2892 (15)C8—C131.4068 (16)
N1—C81.4160 (16)C9—C101.3881 (17)
N2—H2N20.83 (2)C9—H9A0.9300
N2—H1N20.84 (2)C10—C111.3908 (17)
N3—C41.4576 (15)C10—H10A0.9300
C1—C21.3982 (17)C11—C121.3999 (16)
C1—C61.4181 (16)C12—C131.3855 (17)
C2—C31.3837 (17)C12—H12A0.9300
C2—H2A0.9300C13—H13A0.9300
O4—S1—O5119.05 (7)C4—C5—H5A120.4
O4—S1—N2106.97 (6)C6—C5—H5A120.4
O5—S1—N2106.71 (6)C5—C6—C1118.97 (11)
O4—S1—C11107.71 (6)C5—C6—C7119.61 (10)
O5—S1—C11106.92 (6)C1—C6—C7121.42 (10)
N2—S1—C11109.23 (6)N1—C7—C6120.34 (11)
C1—O1—H1O1104.2 (17)N1—C7—H7A119.8
C7—N1—C8122.45 (11)C6—C7—H7A119.8
S1—N2—H2N2115.9 (13)C9—C8—C13119.57 (11)
S1—N2—H1N2117.2 (14)C9—C8—N1115.21 (10)
H2N2—N2—H1N2115.7 (19)C13—C8—N1125.21 (10)
O2—N3—O3123.25 (11)C10—C9—C8120.88 (11)
O2—N3—C4118.61 (11)C10—C9—H9A119.6
O3—N3—C4118.14 (10)C8—C9—H9A119.6
O1—C1—C2118.81 (11)C9—C10—C11119.06 (10)
O1—C1—C6120.75 (11)C9—C10—H10A120.5
C2—C1—C6120.44 (11)C11—C10—H10A120.5
C3—C2—C1120.11 (11)C10—C11—C12120.90 (11)
C3—C2—H2A119.9C10—C11—S1119.05 (9)
C1—C2—H2A119.9C12—C11—S1120.04 (9)
C2—C3—C4119.01 (11)C13—C12—C11119.77 (11)
C2—C3—H3A120.5C13—C12—H12A120.1
C4—C3—H3A120.5C11—C12—H12A120.1
C5—C4—C3122.27 (11)C12—C13—C8119.81 (10)
C5—C4—N3118.65 (11)C12—C13—H13A120.1
C3—C4—N3119.05 (11)C8—C13—H13A120.1
C4—C5—C6119.17 (11)
O1—C1—C2—C3177.73 (11)C1—C6—C7—N11.12 (18)
C6—C1—C2—C3−1.66 (18)C7—N1—C8—C9−178.76 (11)
C1—C2—C3—C40.62 (18)C7—N1—C8—C131.41 (19)
C2—C3—C4—C50.68 (19)C13—C8—C9—C10−0.02 (18)
C2—C3—C4—N3178.64 (11)N1—C8—C9—C10−179.86 (11)
O2—N3—C4—C5−175.78 (11)C8—C9—C10—C110.06 (19)
O3—N3—C4—C54.36 (16)C9—C10—C11—C120.21 (18)
O2—N3—C4—C36.19 (17)C9—C10—C11—S1−179.82 (9)
O3—N3—C4—C3−173.67 (11)O4—S1—C11—C10−128.97 (10)
C3—C4—C5—C6−0.92 (18)O5—S1—C11—C100.07 (12)
N3—C4—C5—C6−178.88 (10)N2—S1—C11—C10115.18 (10)
C4—C5—C6—C1−0.13 (17)O4—S1—C11—C1251.00 (12)
C4—C5—C6—C7179.03 (11)O5—S1—C11—C12−179.95 (10)
O1—C1—C6—C5−177.97 (11)N2—S1—C11—C12−64.84 (11)
C2—C1—C6—C51.41 (18)C10—C11—C12—C13−0.51 (18)
O1—C1—C6—C72.88 (18)S1—C11—C12—C13179.51 (10)
C2—C1—C6—C7−177.74 (11)C11—C12—C13—C80.55 (19)
C8—N1—C7—C6179.21 (11)C9—C8—C13—C12−0.29 (18)
C5—C6—C7—N1−178.02 (11)N1—C8—C13—C12179.54 (11)
D—H···AD—HH···AD···AD—H···A
N2—H2N2···O5i0.82 (3)2.07 (3)2.891 (2)172 (3)
N2—H1N2···O2ii0.84 (3)2.58 (2)3.1378 (15)125 (2)
N2—H1N2···O4iii0.84 (3)2.11 (3)2.883 (2)153 (2)
O1—H1O1···N10.96 (3)1.67 (3)2.5626 (15)154 (4)
C5—H5A···O3iv0.932.553.3350 (17)143
C7—H7A···O3iv0.932.363.187 (2)148
C10—H10A···O1v0.932.583.1861 (19)123
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2N2⋯O5i0.82 (3)2.07 (3)2.891 (2)172 (3)
N2—H1N2⋯O2ii0.84 (3)2.58 (2)3.1378 (15)125 (2)
N2—H1N2⋯O4iii0.84 (3)2.11 (3)2.883 (2)153 (2)
O1—H1O1⋯N10.96 (3)1.67 (3)2.5626 (15)154 (4)
C5—H5A⋯O3iv0.932.553.3350 (17)143
C7—H7A⋯O3iv0.932.363.187 (2)148
C10—H10A⋯O1v0.932.583.1861 (19)123

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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