Literature DB >> 21587459

catena-Poly[[(2,9-dimethyl-1,10-phenanthroline-κN,N')cobalt(II)]-μ-malonato-κO,O:O,O].

Ling-Feng Qiu1, Bai-Lu Zhou, Wei Xu.   

Abstract

In the title compound, [Co(C(3)H(2)O(4))(C(14)H(12)N(2))](n), the Co(II) ion is in a distorted octa-hedral coordination being chelated by a 2,9-dimethyl-1,10-phenanthroline mol-ecule (dmphen) and two carboxyl-ate groups of two malonate ligands The malonate ligand acts in a bridging mode, forming coordination chains along [100]. π-π stacking inter-actions between dmphen ligands [inter-planar distances = 3.414 (4) and 3.447 (4) Å] organize the coordination polymers into supra-molecular double chains.

Entities:  

Year:  2010        PMID: 21587459      PMCID: PMC2983174          DOI: 10.1107/S1600536810038043

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For coordination polymers with dicarboxyl­ate ligands, see: Rao et al. (2004 ▶); Zheng et al. (2004 ▶).

Experimental

Crystal data

[Co(C3H2O4)(C14H12N2)] M = 369.23 Triclinic, a = 6.8767 (14) Å b = 9.5293 (19) Å c = 11.149 (2) Å α = 86.83 (3)° β = 89.53 (3)° γ = 89.52 (3)° V = 729.4 (2) Å3 Z = 2 Mo Kα radiation μ = 1.20 mm−1 T = 295 K 0.33 × 0.11 × 0.07 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.653, T max = 0.782 7245 measured reflections 3309 independent reflections 2590 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.127 S = 1.06 3309 reflections 222 parameters H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.40 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810038043/gk2299sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810038043/gk2299Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C3H2O4)(C14H12N2)]Z = 2
Mr = 369.23F(000) = 378
Triclinic, P1Dx = 1.681 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.8767 (14) ÅCell parameters from 5667 reflections
b = 9.5293 (19) Åθ = 3.5–27.5°
c = 11.149 (2) ŵ = 1.20 mm1
α = 86.83 (3)°T = 295 K
β = 89.53 (3)°Plate, red
γ = 89.52 (3)°0.33 × 0.11 × 0.07 mm
V = 729.4 (2) Å3
Rigaku R-AXIS RAPID diffractometer3309 independent reflections
Radiation source: fine-focus sealed tube2590 reflections with I > 2σ(I)
graphiteRint = 0.032
Detector resolution: 0 pixels mm-1θmax = 27.5°, θmin = 3.5°
ω scansh = −8→8
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −12→12
Tmin = 0.653, Tmax = 0.782l = −14→14
7245 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.127H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0568P)2 + 0.8449P] where P = (Fo2 + 2Fc2)/3
3309 reflections(Δ/σ)max = 0.015
222 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.40 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.23932 (7)0.27775 (5)0.73432 (4)0.03063 (16)
N10.2539 (4)0.0677 (3)0.6805 (2)0.0283 (6)
N20.2379 (4)0.1661 (3)0.9024 (2)0.0264 (5)
C10.2526 (5)0.0223 (4)0.5691 (3)0.0346 (7)
C20.2653 (5)−0.1224 (4)0.5494 (4)0.0435 (9)
H2A0.2659−0.15210.47130.052*
C30.2765 (5)−0.2181 (4)0.6433 (4)0.0439 (9)
H3A0.2860−0.31330.62970.053*
C40.2737 (5)−0.1737 (3)0.7614 (3)0.0347 (7)
C50.2824 (5)−0.2671 (4)0.8659 (4)0.0437 (9)
H5A0.2923−0.36330.85710.052*
C60.2766 (5)−0.2182 (4)0.9773 (4)0.0413 (9)
H6A0.2831−0.28121.04390.050*
C70.2604 (5)−0.0702 (3)0.9941 (3)0.0322 (7)
C80.2485 (5)−0.0137 (4)1.1072 (3)0.0396 (8)
H8A0.2515−0.07241.17660.048*
C90.2326 (5)0.1280 (4)1.1146 (3)0.0382 (8)
H9A0.22490.16601.18960.046*
C100.2276 (5)0.2173 (3)1.0107 (3)0.0312 (7)
C110.2530 (4)0.0242 (3)0.8937 (3)0.0266 (6)
C120.2620 (4)−0.0274 (3)0.7747 (3)0.0281 (7)
C130.2325 (6)0.1281 (5)0.4669 (3)0.0461 (9)
H13A0.11900.18500.47890.069*
H13B0.22020.08090.39350.069*
H13C0.34550.18670.46230.069*
C140.2121 (6)0.3725 (4)1.0190 (3)0.0424 (9)
H14A0.33910.41041.03040.064*
H14B0.12980.39331.08580.064*
H14C0.15740.41370.94620.064*
O10.4924 (4)0.3945 (4)0.7882 (3)0.0622 (9)
O20.4560 (5)0.3466 (4)0.6052 (3)0.0675 (9)
O30.9214 (4)0.2696 (3)0.6983 (3)0.0646 (9)
O41.0687 (5)0.4640 (4)0.7095 (5)0.0950 (15)
C150.5528 (5)0.4017 (3)0.6837 (3)0.0331 (7)
C160.7380 (5)0.4791 (4)0.6502 (3)0.0360 (8)
H16A0.74210.49750.56380.043*
H16C0.73590.56910.68690.043*
C170.9200 (5)0.3999 (4)0.6886 (3)0.0343 (7)
U11U22U33U12U13U23
Co10.0319 (2)0.0274 (2)0.0321 (3)−0.00231 (17)−0.00176 (17)0.00297 (17)
N10.0266 (13)0.0290 (13)0.0292 (14)−0.0007 (11)0.0004 (11)−0.0026 (11)
N20.0265 (13)0.0237 (12)0.0289 (14)−0.0015 (10)−0.0022 (10)−0.0008 (10)
C10.0240 (15)0.045 (2)0.0350 (18)−0.0042 (14)0.0005 (13)−0.0083 (15)
C20.040 (2)0.052 (2)0.040 (2)−0.0062 (17)0.0002 (16)−0.0192 (18)
C30.0363 (19)0.0362 (19)0.061 (3)−0.0042 (16)−0.0004 (17)−0.0184 (18)
C40.0284 (16)0.0271 (16)0.049 (2)−0.0028 (13)0.0011 (15)−0.0025 (15)
C50.0397 (19)0.0227 (16)0.068 (3)−0.0011 (15)−0.0021 (18)0.0024 (16)
C60.0390 (19)0.0301 (18)0.053 (2)−0.0029 (15)−0.0025 (17)0.0164 (16)
C70.0245 (15)0.0318 (17)0.0393 (19)−0.0044 (13)−0.0043 (13)0.0089 (14)
C80.0374 (18)0.047 (2)0.0331 (19)−0.0060 (16)−0.0018 (15)0.0127 (16)
C90.0413 (19)0.050 (2)0.0238 (17)−0.0036 (16)−0.0022 (14)−0.0013 (15)
C100.0293 (16)0.0340 (17)0.0303 (17)−0.0014 (14)−0.0010 (13)−0.0011 (13)
C110.0210 (14)0.0272 (15)0.0314 (17)−0.0034 (12)−0.0024 (12)0.0022 (12)
C120.0223 (14)0.0261 (15)0.0360 (18)−0.0014 (12)0.0002 (12)−0.0006 (13)
C130.046 (2)0.064 (3)0.0282 (19)−0.0095 (19)−0.0032 (16)−0.0023 (17)
C140.052 (2)0.0385 (19)0.037 (2)0.0000 (17)0.0006 (17)−0.0080 (16)
O10.0481 (16)0.097 (3)0.0412 (17)−0.0195 (17)0.0000 (13)0.0045 (16)
O20.063 (2)0.083 (2)0.059 (2)−0.0335 (18)0.0073 (16)−0.0249 (18)
O30.0481 (17)0.0449 (17)0.101 (3)0.0117 (14)−0.0200 (17)−0.0033 (17)
O40.0404 (17)0.059 (2)0.183 (5)−0.0152 (16)−0.040 (2)0.027 (2)
C150.0266 (15)0.0300 (16)0.042 (2)0.0048 (13)−0.0038 (14)0.0032 (14)
C160.0349 (17)0.0307 (17)0.042 (2)−0.0006 (14)−0.0031 (15)0.0068 (14)
C170.0327 (17)0.0369 (18)0.0327 (18)0.0018 (15)−0.0001 (14)0.0021 (14)
Co1—O12.180 (3)C7—C81.400 (5)
Co1—O22.145 (3)C8—C91.361 (5)
Co1—O3i2.229 (3)C8—H8A0.9300
Co1—O4i2.126 (4)C9—C101.399 (5)
Co1—N12.122 (3)C9—H9A0.9300
Co1—N22.103 (3)C10—C141.489 (5)
Co1—C152.512 (4)C11—C121.440 (5)
Co1—C17i2.519 (3)C13—H13A0.9600
N1—C11.338 (4)C13—H13B0.9600
N1—C121.350 (4)C13—H13C0.9600
N2—C101.328 (4)C14—H14A0.9600
N2—C111.364 (4)C14—H14B0.9600
C1—C21.410 (5)C14—H14C0.9600
C1—C131.485 (5)O1—C151.233 (4)
C2—C31.352 (6)O2—C151.246 (5)
C2—H2A0.9300O3—C171.240 (4)
C3—C41.405 (5)O3—Co1ii2.229 (3)
C3—H3A0.9300O4—C171.226 (5)
C4—C121.411 (4)O4—Co1ii2.126 (4)
C4—C51.428 (5)C15—C161.511 (5)
C5—C61.350 (6)C16—C171.509 (5)
C5—H5A0.9300C16—H16A0.9700
C6—C71.436 (5)C16—H16C0.9700
C6—H6A0.9300C17—Co1ii2.519 (3)
C7—C111.398 (4)
N2—Co1—N179.24 (10)C9—C8—H8A120.3
N2—Co1—O4i119.53 (16)C7—C8—H8A120.3
N1—Co1—O4i140.97 (13)C8—C9—C10120.8 (3)
N2—Co1—O2136.06 (13)C8—C9—H9A119.6
N1—Co1—O292.45 (12)C10—C9—H9A119.6
O4i—Co1—O293.90 (16)N2—C10—C9120.9 (3)
N2—Co1—O189.80 (11)N2—C10—C14118.4 (3)
N1—Co1—O1123.50 (12)C9—C10—C14120.7 (3)
O4i—Co1—O192.30 (13)N2—C11—C7122.8 (3)
O2—Co1—O159.10 (12)N2—C11—C12117.3 (3)
N2—Co1—O3i97.95 (12)C7—C11—C12119.9 (3)
N1—Co1—O3i86.71 (11)N1—C12—C4123.0 (3)
O4i—Co1—O3i58.47 (12)N1—C12—C11117.8 (3)
O2—Co1—O3i124.82 (14)C4—C12—C11119.2 (3)
O1—Co1—O3i149.76 (13)C1—C13—H13A109.5
C1—N1—C12119.0 (3)C1—C13—H13B109.5
C1—N1—Co1128.3 (2)H13A—C13—H13B109.5
C12—N1—Co1112.6 (2)C1—C13—H13C109.5
C10—N2—C11118.9 (3)H13A—C13—H13C109.5
C10—N2—Co1128.1 (2)H13B—C13—H13C109.5
C11—N2—Co1113.0 (2)C10—C14—H14A109.5
N1—C1—C2120.9 (3)C10—C14—H14B109.5
N1—C1—C13118.2 (3)H14A—C14—H14B109.5
C2—C1—C13120.9 (3)C10—C14—H14C109.5
C3—C2—C1120.4 (3)H14A—C14—H14C109.5
C3—C2—H2A119.8H14B—C14—H14C109.5
C1—C2—H2A119.8C15—O1—Co190.4 (2)
C2—C3—C4120.0 (3)C15—O2—Co191.7 (2)
C2—C3—H3A120.0O1—C15—O2118.8 (3)
C4—C3—H3A120.0O1—C15—C16120.9 (3)
C3—C4—C12116.7 (3)O2—C15—C16120.3 (3)
C3—C4—C5123.9 (3)O1—C15—Co160.2 (2)
C12—C4—C5119.4 (3)O2—C15—Co158.6 (2)
C6—C5—C4121.2 (3)C16—C15—Co1178.2 (2)
C6—C5—H5A119.4C17—C16—C15113.5 (3)
C4—C5—H5A119.4C17—C16—H16A108.9
C5—C6—C7120.8 (3)C15—C16—H16A108.9
C5—C6—H6A119.6C17—C16—H16C108.9
C7—C6—H6A119.6C15—C16—H16C108.9
C11—C7—C8117.2 (3)H16A—C16—H16C107.7
C11—C7—C6119.4 (3)O4—C17—O3119.4 (4)
C8—C7—C6123.4 (3)O4—C17—C16120.1 (3)
C9—C8—C7119.4 (3)O3—C17—C16120.5 (3)
Table 1

Selected bond lengths (Å)

Co1—O12.180 (3)
Co1—O22.145 (3)
Co1—O3i2.229 (3)
Co1—O4i2.126 (4)
Co1—N12.122 (3)
Co1—N22.103 (3)

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Y-Q Zheng; J-L Lin; Z-P Kong
Journal:  Inorg Chem       Date:  2004-04-19       Impact factor: 5.165

3.  Metal carboxylates with open architectures.

Authors:  C N R Rao; Srinivasan Natarajan; R Vaidhyanathan
Journal:  Angew Chem Int Ed Engl       Date:  2004-03-12       Impact factor: 15.336

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