Literature DB >> 21587458

Bromidobis(1,10-phenanthroline-κN,N')copper(II) dicyanamidate.

Ivan Potočňák1, Zuzana Pravcová, Dmytro Rak.   

Abstract

The title compound, [CuBr(C(12)n class="Species">H(8)N(2))(2)][N(CN)(2)], is formed of discrete [CuBr(phen)(2)](+) complex cations and uncoordinated [N(CN)(2)](-) anions (phen is 1,10-phenanthroline). The Cu atom is five-coordinated in a distorted trigonal-bipyramidal geometry by two phen mol-ecules and one bromide ligand, which coordinates in the equatorial plane at a distance of 2.5228 (4) Å and lying along with the Cu and the amide N atoms on a twofold rotation axis. The two axial Cu-N distances [1.9926 (15) Å] are slightly shorter than the two equatorial Cu-N bonds [2.0979 (15) Å]. The structure is stabilized by a weak C-H⋯N hydrogen bond, with a cyanide N atom of the dicyanamide ligand as an acceptor, and π-π inter-actions between nearly parallel phenyl and pyridine rings of two adjacent phen mol-ecules [centroid-centroid distance = 3.589 (1) Å], and between π electrons of the dicyanamide anion and the pyridine ring [N⋯Cg(pyridine) = 3.511 (3) Å; C-N⋯Cg(pyridine) = 80.2 (2)°].

Entities:  

Year:  2010        PMID: 21587458      PMCID: PMC2983267          DOI: 10.1107/S1600536810037979

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For structures containing [Cu(phen)2Br]+ cations, see: Murphy et al. (1998 ▶); Parker et al. (1994 ▶); Lu et al. (2004 ▶). For n class="Chemical">penta­coordinated Cu(II) in [Cu(L)2dca]Y complexes [L = 1,10- phenanthroline (phen) and 2,2′-bipyridine (bpy), Y is a monovalent anion], see: Potočňák et al. (2005 ▶, 2006 ▶, 2008a ▶,b ▶). For π–π inter­actions, see: Janiak (2000 ▶). For the τ parameter, see: Addison et al. (1984 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶). For reference bond lengths, see: Jolly (1991 ▶).

Experimental

Crystal data

[CuBr(C12H8N2)2]C2N3 M = 569.91 Monoclinic, a = 15.2317 (4) Å b = 10.8270 (3) Å c = 14.7408 (5) Å β = 114.030 (4)° V = 2220.27 (11) Å3 Z = 4 Mo Kα radiation μ = 2.82 mm−1 T = 293 K 0.68 × 0.17 × 0.09 mm

Data collection

Oxford Diffraction Xcalibur2 CCD diffractometer Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2007 ▶) T min = 0.328, T max = 0.819 11517 measured reflections 2182 independent reflections 1799 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.021 wR(F 2) = 0.062 S = 1.06 2182 reflections 160 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.43 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2007 ▶); data n class="Disease">reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2001 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810037979/kp2274sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810037979/kp2274Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CuBr(C12H8N2)2]C2N3F(000) = 1140
Mr = 569.91Dx = 1.705 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71069 Å
Hall symbol: -C 2ycCell parameters from 7148 reflections
a = 15.2317 (4) Åθ = 3.0–29.5°
b = 10.8270 (3) ŵ = 2.82 mm1
c = 14.7408 (5) ÅT = 293 K
β = 114.030 (4)°Prism, green
V = 2220.27 (11) Å30.68 × 0.17 × 0.09 mm
Z = 4
Oxford Diffraction Xcalibur2 CCD diffractometer2182 independent reflections
Radiation source: Enhance (Mo) X-ray Source1799 reflections with I > 2σ(I)
graphiteRint = 0.026
Detector resolution: 8.3438 pixels mm-1θmax = 26.0°, θmin = 3.0°
Rotation method data acquisition using ω scansh = −18→18
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2007)k = −13→13
Tmin = 0.328, Tmax = 0.819l = −18→18
11517 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.021Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.062H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0401P)2] where P = (Fo2 + 2Fc2)/3
2182 reflections(Δ/σ)max < 0.001
160 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.43 e Å3
Experimental. CrysAlisPro, Oxford Diffraction Ltd., Analytical numeric absorption correction using a multifaceted crystal model based on expressions derived by R.C. Clark & J.S. Reid. (Clark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887-897
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.72646 (3)0.25000.03323 (11)
N100.62123 (11)0.71984 (14)0.22918 (11)0.0327 (4)
N200.59053 (11)0.64969 (13)0.38697 (12)0.0321 (4)
Br10.50000.95947 (2)0.25000.03604 (10)
C110.69628 (13)0.66725 (15)0.30537 (13)0.0308 (4)
C120.63710 (15)0.76473 (19)0.15301 (15)0.0396 (5)
H120.58690.80390.10170.047*
C130.72584 (16)0.75547 (19)0.14697 (16)0.0434 (5)
H130.73420.78770.09250.052*
C140.80010 (15)0.6989 (2)0.22157 (16)0.0415 (5)
H140.85900.68980.21730.050*
C150.78767 (14)0.65401 (16)0.30513 (15)0.0348 (4)
C160.86264 (14)0.6003 (2)0.38968 (15)0.0445 (5)
H160.92310.58880.38940.053*
C210.67959 (13)0.63020 (16)0.39026 (14)0.0295 (4)
C220.57510 (15)0.62008 (19)0.46690 (15)0.0380 (5)
H220.51390.63100.46510.046*
C230.64771 (16)0.57311 (19)0.55360 (15)0.0443 (5)
H230.63470.55520.60860.053*
C240.73686 (16)0.55385 (18)0.55692 (15)0.0428 (5)
H240.78530.52240.61420.051*
C250.75581 (14)0.58155 (17)0.47343 (14)0.0356 (4)
C260.84725 (16)0.56610 (19)0.46978 (16)0.0455 (5)
H260.89740.53160.52400.055*
N10.50000.4095 (4)0.25000.0987 (14)
C20.5311 (2)0.3506 (2)0.3332 (2)0.0560 (6)
N20.56044 (18)0.3068 (3)0.41052 (18)0.0749 (7)
U11U22U33U12U13U23
Cu10.02710 (19)0.0454 (2)0.03011 (19)0.0000.01467 (14)0.000
N100.0319 (9)0.0372 (9)0.0308 (9)0.0010 (7)0.0146 (7)0.0012 (7)
N200.0348 (9)0.0320 (8)0.0295 (9)−0.0022 (7)0.0131 (7)−0.0029 (6)
Br10.03279 (16)0.03849 (17)0.03668 (17)0.0000.01399 (12)0.000
C110.0322 (10)0.0290 (10)0.0307 (10)−0.0017 (8)0.0122 (8)−0.0071 (8)
C120.0405 (12)0.0453 (12)0.0371 (11)0.0029 (9)0.0200 (9)0.0040 (9)
C130.0479 (13)0.0485 (12)0.0450 (12)−0.0028 (10)0.0303 (11)−0.0002 (10)
C140.0358 (11)0.0456 (11)0.0522 (13)−0.0021 (10)0.0271 (10)−0.0103 (10)
C150.0323 (10)0.0347 (10)0.0397 (11)−0.0015 (8)0.0169 (8)−0.0103 (8)
C160.0288 (11)0.0509 (12)0.0500 (14)0.0032 (10)0.0121 (10)−0.0099 (11)
C210.0320 (10)0.0265 (9)0.0290 (10)−0.0029 (7)0.0114 (8)−0.0056 (7)
C220.0418 (12)0.0423 (11)0.0338 (11)−0.0044 (9)0.0194 (9)−0.0004 (9)
C230.0558 (14)0.0457 (13)0.0304 (11)−0.0075 (10)0.0164 (10)0.0021 (9)
C240.0463 (13)0.0424 (12)0.0299 (11)−0.0039 (9)0.0055 (10)0.0018 (9)
C250.0368 (11)0.0319 (10)0.0318 (10)−0.0020 (9)0.0075 (9)−0.0059 (9)
C260.0346 (11)0.0499 (13)0.0413 (12)0.0059 (9)0.0048 (10)−0.0021 (10)
N10.139 (4)0.065 (2)0.055 (2)0.0000.001 (2)0.000
C20.0556 (15)0.0599 (15)0.0556 (16)−0.0062 (12)0.0257 (13)−0.0226 (14)
N20.0795 (17)0.1034 (18)0.0465 (14)−0.0076 (15)0.0304 (12)−0.0144 (13)
Cu1—N10i1.9926 (15)C14—H140.9300
Cu1—N101.9926 (15)C15—C161.427 (3)
Cu1—N20i2.0979 (15)C16—C261.346 (3)
Cu1—N202.0979 (15)C16—H160.9300
Cu1—Br12.5228 (4)C21—C251.403 (3)
N10—C121.333 (3)C22—C231.401 (3)
N10—C111.359 (2)C22—H220.9300
N20—C221.331 (2)C23—C241.355 (3)
N20—C211.354 (2)C23—H230.9300
C11—C151.401 (3)C24—C251.406 (3)
C11—C211.432 (3)C24—H240.9300
C12—C131.394 (3)C25—C261.425 (3)
C12—H120.9300C26—H260.9300
C13—C141.361 (3)N1—C21.288 (4)
C13—H130.9300N1—C2i1.288 (4)
C14—C151.407 (3)C2—N21.145 (3)
N10i—Cu1—N10175.88 (9)C15—C14—H14120.0
N10i—Cu1—N20i81.19 (6)C11—C15—C14117.07 (18)
N10—Cu1—N20i97.16 (6)C11—C15—C16118.83 (19)
N10i—Cu1—N2097.16 (6)C14—C15—C16124.07 (19)
N10—Cu1—N2081.19 (6)C26—C16—C15121.0 (2)
N20i—Cu1—N20133.32 (8)C26—C16—H16119.5
N10i—Cu1—Br192.06 (4)C15—C16—H16119.5
N10—Cu1—Br192.06 (4)N20—C21—C25123.38 (18)
N20i—Cu1—Br1113.34 (4)N20—C21—C11117.18 (16)
N20—Cu1—Br1113.34 (4)C25—C21—C11119.38 (18)
C12—N10—C11117.96 (17)N20—C22—C23122.4 (2)
C12—N10—Cu1127.88 (14)N20—C22—H22118.8
C11—N10—Cu1114.09 (12)C23—C22—H22118.8
C22—N20—C21117.78 (17)C24—C23—C22119.7 (2)
C22—N20—Cu1131.57 (14)C24—C23—H23120.1
C21—N20—Cu1110.64 (12)C22—C23—H23120.1
N10—C11—C15122.90 (18)C23—C24—C25119.70 (19)
N10—C11—C21116.79 (16)C23—C24—H24120.1
C15—C11—C21120.25 (17)C25—C24—H24120.1
N10—C12—C13122.74 (19)C21—C25—C24116.94 (19)
N10—C12—H12118.6C21—C25—C26118.98 (19)
C13—C12—H12118.6C24—C25—C26124.06 (19)
C14—C13—C12119.3 (2)C16—C26—C25121.52 (19)
C14—C13—H13120.3C16—C26—H26119.2
C12—C13—H13120.3C25—C26—H26119.2
C13—C14—C15119.94 (19)C2—N1—C2i120.7 (4)
C13—C14—H14120.0N2—C2—N1174.8 (3)
D—H···AD—HH···AD···AD—H···A
C22—H22···N2ii0.932.603.346 (3)137
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C22—H22⋯N2i0.932.603.346 (3)137

Symmetry code: (i) .

  3 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Low-dimensional compounds containing cyano groups. XVI. (Dicyanamido-kappaN1)bis(1,10-phenanthroline-kappa(2)N,N')copper(II) tetrafluoridoborate.

Authors:  Ivan Potocnák; Martin Spilovský; Zdenek Trávnícek
Journal:  Acta Crystallogr C       Date:  2008-03-15       Impact factor: 1.172

  3 in total

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