| Literature DB >> 21587443 |
Paul Deburgomaster1, Jon Zubieta.
Abstract
The title compound, [Cu(1,3-HO(3)PC(6)H(4)PO(3)H)(C(12)H(8)N(2))](n), is a coordination polymer of the metal-diphospho-nate family. The chain structure is constructed from '4+1' square-py-rami-dally coordinated copper(II) atoms bonded to chelating phenanthroline (phen) ligands and linked through 1,3-phenyldihydrogendiphospho-nate ligands. The basal plane of the Cu(II) site is defined by the phen nitro-gen donors and phospho-nate oxygen atoms from two diphospho-nate ligands, while the apical position is occupied by an oxygen donor from a third diphospho-nate ligand. The chains propagate along the a-axis direction. Inversion-related phen groups engage in π-π stacking with a mean distance of 3.376 (2) Å between the ring planes. O-H⋯O hydrogen-bonding inter-actions between the protonated {P-OH} groups of one chain and the {P=O} groups of adjacent chains stabilize the crystal packing.Entities:
Year: 2010 PMID: 21587443 PMCID: PMC2983280 DOI: 10.1107/S1600536810037359
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C12H8N2)(C6H6O6P2)] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 5367 reflections | |
| θ = 2.3–28.4° | |
| µ = 1.48 mm−1 | |
| α = 99.688 (2)° | |
| β = 106.542 (2)° | Block, blue |
| γ = 98.184 (2)° | 0.35 × 0.30 × 0.21 mm |
| Bruker APEX CCD area-detector diffractometer | 4190 independent reflections |
| Radiation source: fine-focus sealed tube | 4042 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.1°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 8704 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4190 reflections | (Δ/σ)max = 0.001 |
| 262 parameters | Δρmax = 0.71 e Å−3 |
| 0 restraints | Δρmin = −0.67 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.32660 (3) | 0.82971 (3) | 0.58802 (2) | 0.01190 (8) | |
| P1 | 0.32369 (6) | 1.03977 (6) | 0.85348 (4) | 0.01186 (11) | |
| P2 | −0.33649 (6) | 1.05190 (6) | 0.64714 (4) | 0.01144 (11) | |
| O1 | 0.31787 (17) | 1.03279 (17) | 0.72590 (12) | 0.0148 (3) | |
| O2 | 0.33003 (18) | 0.88390 (17) | 0.88644 (13) | 0.0163 (3) | |
| H2 | 0.3720 | 0.8969 | 0.9599 | 0.025* | |
| O3 | 0.46333 (18) | 1.16671 (18) | 0.94061 (13) | 0.0162 (3) | |
| O4 | −0.43602 (17) | 0.89210 (17) | 0.62759 (13) | 0.0138 (3) | |
| O5 | −0.44080 (17) | 1.17467 (17) | 0.67394 (13) | 0.0151 (3) | |
| H5 | −0.5181 | 1.1348 | 0.6956 | 0.023* | |
| O6 | −0.26911 (17) | 1.08135 (18) | 0.54895 (13) | 0.0151 (3) | |
| N1 | 0.0864 (2) | 0.7410 (2) | 0.55889 (15) | 0.0134 (3) | |
| N2 | 0.3570 (2) | 0.6720 (2) | 0.68729 (15) | 0.0138 (3) | |
| C1 | 0.1322 (2) | 1.0872 (2) | 0.86658 (17) | 0.0124 (4) | |
| C2 | −0.0105 (2) | 1.0504 (2) | 0.76856 (17) | 0.0130 (4) | |
| H2A | −0.0062 | 1.0002 | 0.6943 | 0.016* | |
| C3 | −0.1596 (2) | 1.0864 (2) | 0.77792 (17) | 0.0122 (4) | |
| C4 | −0.1667 (2) | 1.1571 (2) | 0.88791 (18) | 0.0145 (4) | |
| H4 | −0.2678 | 1.1808 | 0.8953 | 0.017* | |
| C5 | −0.0249 (3) | 1.1930 (2) | 0.98692 (18) | 0.0160 (4) | |
| H5A | −0.0298 | 1.2404 | 1.0617 | 0.019* | |
| C6 | 0.1235 (2) | 1.1592 (2) | 0.97584 (18) | 0.0143 (4) | |
| H6 | 0.2198 | 1.1853 | 1.0431 | 0.017* | |
| C7 | −0.0474 (3) | 0.7773 (2) | 0.49048 (18) | 0.0153 (4) | |
| H7 | −0.0340 | 0.8447 | 0.4401 | 0.018* | |
| C8 | −0.2076 (3) | 0.7190 (3) | 0.49042 (19) | 0.0184 (4) | |
| H8 | −0.3007 | 0.7471 | 0.4408 | 0.022* | |
| C9 | −0.2286 (3) | 0.6210 (3) | 0.56286 (19) | 0.0179 (4) | |
| H9 | −0.3364 | 0.5812 | 0.5636 | 0.021* | |
| C10 | −0.0895 (3) | 0.5798 (2) | 0.63595 (18) | 0.0154 (4) | |
| C11 | 0.0661 (2) | 0.6437 (2) | 0.62948 (18) | 0.0134 (4) | |
| C12 | −0.0956 (3) | 0.4795 (3) | 0.7153 (2) | 0.0187 (4) | |
| H12 | −0.1994 | 0.4363 | 0.7209 | 0.022* | |
| C13 | 0.0445 (3) | 0.4451 (3) | 0.78248 (19) | 0.0192 (4) | |
| H13 | 0.0370 | 0.3798 | 0.8353 | 0.023* | |
| C14 | 0.2038 (3) | 0.5059 (2) | 0.77509 (18) | 0.0165 (4) | |
| C15 | 0.2133 (3) | 0.6059 (2) | 0.69964 (18) | 0.0138 (4) | |
| C16 | 0.3533 (3) | 0.4700 (3) | 0.83802 (19) | 0.0194 (4) | |
| H16 | 0.3534 | 0.4010 | 0.8891 | 0.023* | |
| C17 | 0.4990 (3) | 0.5359 (3) | 0.82459 (19) | 0.0192 (4) | |
| H17 | 0.6005 | 0.5120 | 0.8659 | 0.023* | |
| C18 | 0.4971 (3) | 0.6387 (2) | 0.74959 (18) | 0.0166 (4) | |
| H18 | 0.5988 | 0.6860 | 0.7430 | 0.020* |
| Cu1 | 0.00830 (12) | 0.01613 (14) | 0.01135 (13) | 0.00099 (9) | 0.00196 (9) | 0.00652 (9) |
| P1 | 0.0083 (2) | 0.0170 (3) | 0.0100 (2) | 0.00289 (18) | 0.00145 (18) | 0.00446 (19) |
| P2 | 0.0076 (2) | 0.0163 (3) | 0.0108 (2) | 0.00190 (18) | 0.00179 (18) | 0.00644 (18) |
| O1 | 0.0121 (6) | 0.0218 (8) | 0.0115 (7) | 0.0033 (6) | 0.0042 (5) | 0.0056 (6) |
| O2 | 0.0172 (7) | 0.0183 (7) | 0.0130 (7) | 0.0043 (6) | 0.0024 (6) | 0.0053 (6) |
| O3 | 0.0107 (6) | 0.0199 (8) | 0.0160 (7) | 0.0019 (6) | 0.0014 (5) | 0.0044 (6) |
| O4 | 0.0090 (6) | 0.0176 (7) | 0.0145 (7) | 0.0013 (5) | 0.0026 (5) | 0.0058 (6) |
| O5 | 0.0109 (6) | 0.0186 (7) | 0.0172 (7) | 0.0041 (6) | 0.0038 (5) | 0.0080 (6) |
| O6 | 0.0106 (6) | 0.0240 (8) | 0.0123 (7) | 0.0029 (6) | 0.0033 (5) | 0.0089 (6) |
| N1 | 0.0130 (8) | 0.0138 (8) | 0.0129 (8) | 0.0012 (6) | 0.0035 (6) | 0.0039 (6) |
| N2 | 0.0122 (8) | 0.0165 (8) | 0.0128 (8) | 0.0031 (6) | 0.0032 (6) | 0.0043 (6) |
| C1 | 0.0102 (8) | 0.0153 (9) | 0.0126 (9) | 0.0028 (7) | 0.0028 (7) | 0.0063 (7) |
| C2 | 0.0119 (9) | 0.0163 (10) | 0.0112 (9) | 0.0027 (7) | 0.0035 (7) | 0.0044 (7) |
| C3 | 0.0094 (8) | 0.0153 (9) | 0.0113 (9) | 0.0006 (7) | 0.0020 (7) | 0.0053 (7) |
| C4 | 0.0125 (9) | 0.0181 (10) | 0.0151 (10) | 0.0034 (7) | 0.0057 (7) | 0.0069 (8) |
| C5 | 0.0161 (9) | 0.0202 (10) | 0.0122 (9) | 0.0036 (8) | 0.0051 (8) | 0.0041 (8) |
| C6 | 0.0117 (9) | 0.0176 (10) | 0.0116 (9) | 0.0009 (7) | 0.0007 (7) | 0.0046 (7) |
| C7 | 0.0138 (9) | 0.0169 (10) | 0.0142 (9) | 0.0024 (8) | 0.0029 (7) | 0.0043 (8) |
| C8 | 0.0130 (9) | 0.0224 (11) | 0.0181 (10) | 0.0042 (8) | 0.0026 (8) | 0.0029 (8) |
| C9 | 0.0125 (9) | 0.0200 (10) | 0.0196 (10) | −0.0002 (8) | 0.0063 (8) | 0.0007 (8) |
| C10 | 0.0149 (9) | 0.0156 (10) | 0.0148 (10) | −0.0004 (8) | 0.0062 (8) | 0.0010 (8) |
| C11 | 0.0136 (9) | 0.0132 (9) | 0.0132 (9) | 0.0009 (7) | 0.0049 (7) | 0.0023 (7) |
| C12 | 0.0192 (10) | 0.0183 (10) | 0.0195 (10) | −0.0012 (8) | 0.0101 (8) | 0.0041 (8) |
| C13 | 0.0248 (11) | 0.0171 (10) | 0.0166 (10) | −0.0012 (8) | 0.0092 (8) | 0.0060 (8) |
| C14 | 0.0207 (10) | 0.0139 (10) | 0.0143 (10) | 0.0014 (8) | 0.0055 (8) | 0.0035 (8) |
| C15 | 0.0152 (9) | 0.0139 (9) | 0.0119 (9) | 0.0018 (7) | 0.0040 (7) | 0.0030 (7) |
| C16 | 0.0257 (11) | 0.0178 (10) | 0.0148 (10) | 0.0056 (9) | 0.0041 (8) | 0.0073 (8) |
| C17 | 0.0201 (10) | 0.0207 (11) | 0.0158 (10) | 0.0069 (8) | 0.0018 (8) | 0.0061 (8) |
| C18 | 0.0148 (9) | 0.0186 (10) | 0.0153 (10) | 0.0034 (8) | 0.0034 (8) | 0.0033 (8) |
| Cu1—O6i | 1.9339 (15) | C4—C5 | 1.399 (3) |
| Cu1—O4ii | 1.9371 (14) | C4—H4 | 0.9500 |
| Cu1—N2 | 2.0142 (18) | C5—C6 | 1.393 (3) |
| Cu1—N1 | 2.0166 (17) | C5—H5A | 0.9500 |
| Cu1—O1 | 2.2918 (15) | C6—H6 | 0.9500 |
| P1—O1 | 1.5215 (15) | C7—C8 | 1.406 (3) |
| P1—O2 | 1.5341 (16) | C7—H7 | 0.9500 |
| P1—O3 | 1.5352 (16) | C8—C9 | 1.377 (3) |
| P1—C1 | 1.805 (2) | C8—H8 | 0.9500 |
| P2—O6 | 1.5092 (15) | C9—C10 | 1.411 (3) |
| P2—O4 | 1.5169 (15) | C9—H9 | 0.9500 |
| P2—O5 | 1.5741 (15) | C10—C11 | 1.411 (3) |
| P2—C3 | 1.803 (2) | C10—C12 | 1.435 (3) |
| O2—H2 | 0.8400 | C11—C15 | 1.433 (3) |
| O4—Cu1iii | 1.9371 (14) | C12—C13 | 1.360 (3) |
| O5—H5 | 0.8400 | C12—H12 | 0.9500 |
| O6—Cu1i | 1.9340 (15) | C13—C14 | 1.437 (3) |
| N1—C7 | 1.333 (3) | C13—H13 | 0.9500 |
| N1—C11 | 1.354 (3) | C14—C15 | 1.400 (3) |
| N2—C18 | 1.333 (3) | C14—C16 | 1.410 (3) |
| N2—C15 | 1.356 (3) | C16—C17 | 1.376 (3) |
| C1—C2 | 1.396 (3) | C16—H16 | 0.9500 |
| C1—C6 | 1.401 (3) | C17—C18 | 1.404 (3) |
| C2—C3 | 1.400 (3) | C17—H17 | 0.9500 |
| C2—H2A | 0.9500 | C18—H18 | 0.9500 |
| C3—C4 | 1.399 (3) | ||
| O6i—Cu1—O4ii | 96.46 (6) | C3—C4—H4 | 120.0 |
| O6i—Cu1—N2 | 160.52 (7) | C6—C5—C4 | 120.02 (19) |
| O4ii—Cu1—N2 | 90.51 (7) | C6—C5—H5A | 120.0 |
| O6i—Cu1—N1 | 90.87 (7) | C4—C5—H5A | 120.0 |
| O4ii—Cu1—N1 | 171.94 (7) | C5—C6—C1 | 120.71 (19) |
| N2—Cu1—N1 | 81.49 (7) | C5—C6—H6 | 119.6 |
| O6i—Cu1—O1 | 98.12 (6) | C1—C6—H6 | 119.6 |
| O4ii—Cu1—O1 | 91.46 (6) | N1—C7—C8 | 122.1 (2) |
| N2—Cu1—O1 | 99.88 (6) | N1—C7—H7 | 118.9 |
| N1—Cu1—O1 | 90.82 (6) | C8—C7—H7 | 118.9 |
| O1—P1—O2 | 111.95 (9) | C9—C8—C7 | 119.4 (2) |
| O1—P1—O3 | 112.39 (9) | C9—C8—H8 | 120.3 |
| O2—P1—O3 | 112.01 (9) | C7—C8—H8 | 120.3 |
| O1—P1—C1 | 107.19 (9) | C8—C9—C10 | 119.79 (19) |
| O2—P1—C1 | 106.22 (9) | C8—C9—H9 | 120.1 |
| O3—P1—C1 | 106.62 (9) | C10—C9—H9 | 120.1 |
| O6—P2—O4 | 115.35 (9) | C11—C10—C9 | 116.6 (2) |
| O6—P2—O5 | 110.16 (8) | C11—C10—C12 | 118.5 (2) |
| O4—P2—O5 | 110.15 (8) | C9—C10—C12 | 124.91 (19) |
| O6—P2—C3 | 106.07 (9) | N1—C11—C10 | 123.45 (19) |
| O4—P2—C3 | 109.09 (9) | N1—C11—C15 | 116.48 (18) |
| O5—P2—C3 | 105.48 (9) | C10—C11—C15 | 120.06 (19) |
| P1—O1—Cu1 | 128.96 (9) | C13—C12—C10 | 121.23 (19) |
| P1—O2—H2 | 109.5 | C13—C12—H12 | 119.4 |
| P2—O4—Cu1iii | 127.78 (9) | C10—C12—H12 | 119.4 |
| P2—O5—H5 | 109.5 | C12—C13—C14 | 121.2 (2) |
| P2—O6—Cu1i | 138.73 (9) | C12—C13—H13 | 119.4 |
| C7—N1—C11 | 118.57 (18) | C14—C13—H13 | 119.4 |
| C7—N1—Cu1 | 128.72 (15) | C15—C14—C16 | 117.0 (2) |
| C11—N1—Cu1 | 112.34 (13) | C15—C14—C13 | 118.7 (2) |
| C18—N2—C15 | 118.12 (18) | C16—C14—C13 | 124.3 (2) |
| C18—N2—Cu1 | 128.83 (15) | N2—C15—C14 | 123.71 (19) |
| C15—N2—Cu1 | 112.63 (13) | N2—C15—C11 | 115.95 (18) |
| C2—C1—C6 | 118.83 (18) | C14—C15—C11 | 120.34 (19) |
| C2—C1—P1 | 120.67 (15) | C17—C16—C14 | 119.2 (2) |
| C6—C1—P1 | 120.50 (15) | C17—C16—H16 | 120.4 |
| C1—C2—C3 | 121.07 (18) | C14—C16—H16 | 120.4 |
| C1—C2—H2A | 119.5 | C16—C17—C18 | 119.7 (2) |
| C3—C2—H2A | 119.5 | C16—C17—H17 | 120.1 |
| C4—C3—C2 | 119.43 (18) | C18—C17—H17 | 120.1 |
| C4—C3—P2 | 120.71 (15) | N2—C18—C17 | 122.1 (2) |
| C2—C3—P2 | 119.75 (15) | N2—C18—H18 | 118.9 |
| C5—C4—C3 | 119.92 (18) | C17—C18—H18 | 118.9 |
| C5—C4—H4 | 120.0 | ||
| O2—P1—O1—Cu1 | −2.35 (13) | C2—C3—C4—C5 | 0.9 (3) |
| O3—P1—O1—Cu1 | 124.73 (10) | P2—C3—C4—C5 | −175.41 (16) |
| C1—P1—O1—Cu1 | −118.45 (11) | C3—C4—C5—C6 | 0.4 (3) |
| O6i—Cu1—O1—P1 | 169.38 (10) | C4—C5—C6—C1 | −1.0 (3) |
| O4ii—Cu1—O1—P1 | −93.88 (11) | C2—C1—C6—C5 | 0.4 (3) |
| N2—Cu1—O1—P1 | −3.11 (12) | P1—C1—C6—C5 | −178.59 (16) |
| N1—Cu1—O1—P1 | 78.39 (11) | C11—N1—C7—C8 | 0.7 (3) |
| O6—P2—O4—Cu1iii | −106.17 (11) | Cu1—N1—C7—C8 | −171.75 (16) |
| O5—P2—O4—Cu1iii | 19.28 (13) | N1—C7—C8—C9 | −0.1 (3) |
| C3—P2—O4—Cu1iii | 134.62 (11) | C7—C8—C9—C10 | −0.2 (3) |
| O4—P2—O6—Cu1i | 97.16 (15) | C8—C9—C10—C11 | −0.1 (3) |
| O5—P2—O6—Cu1i | −28.29 (17) | C8—C9—C10—C12 | 179.7 (2) |
| C3—P2—O6—Cu1i | −141.97 (14) | C7—N1—C11—C10 | −1.0 (3) |
| O6i—Cu1—N1—C7 | −16.18 (18) | Cu1—N1—C11—C10 | 172.65 (16) |
| N2—Cu1—N1—C7 | −178.19 (19) | C7—N1—C11—C15 | 178.83 (18) |
| O1—Cu1—N1—C7 | 81.95 (18) | Cu1—N1—C11—C15 | −7.6 (2) |
| O6i—Cu1—N1—C11 | 171.00 (14) | C9—C10—C11—N1 | 0.7 (3) |
| N2—Cu1—N1—C11 | 9.00 (14) | C12—C10—C11—N1 | −179.16 (19) |
| O1—Cu1—N1—C11 | −90.87 (14) | C9—C10—C11—C15 | −179.11 (18) |
| O6i—Cu1—N2—C18 | 110.8 (2) | C12—C10—C11—C15 | 1.0 (3) |
| O4ii—Cu1—N2—C18 | −0.45 (18) | C11—C10—C12—C13 | −0.4 (3) |
| N1—Cu1—N2—C18 | 178.63 (19) | C9—C10—C12—C13 | 179.7 (2) |
| O1—Cu1—N2—C18 | −92.02 (18) | C10—C12—C13—C14 | −1.1 (3) |
| O6i—Cu1—N2—C15 | −76.9 (2) | C12—C13—C14—C15 | 2.0 (3) |
| O4ii—Cu1—N2—C15 | 171.83 (14) | C12—C13—C14—C16 | −177.0 (2) |
| N1—Cu1—N2—C15 | −9.08 (14) | C18—N2—C15—C14 | 0.7 (3) |
| O1—Cu1—N2—C15 | 80.27 (14) | Cu1—N2—C15—C14 | −172.44 (16) |
| O1—P1—C1—C2 | 26.20 (19) | C18—N2—C15—C11 | −179.11 (18) |
| O2—P1—C1—C2 | −93.64 (17) | Cu1—N2—C15—C11 | 7.7 (2) |
| O3—P1—C1—C2 | 146.75 (16) | C16—C14—C15—N2 | −2.1 (3) |
| O1—P1—C1—C6 | −154.87 (16) | C13—C14—C15—N2 | 178.79 (19) |
| O2—P1—C1—C6 | 85.30 (18) | C16—C14—C15—C11 | 177.76 (19) |
| O3—P1—C1—C6 | −34.31 (19) | C13—C14—C15—C11 | −1.4 (3) |
| C6—C1—C2—C3 | 0.9 (3) | N1—C11—C15—N2 | −0.1 (3) |
| P1—C1—C2—C3 | 179.87 (16) | C10—C11—C15—N2 | 179.72 (18) |
| C1—C2—C3—C4 | −1.5 (3) | N1—C11—C15—C14 | −179.95 (18) |
| C1—C2—C3—P2 | 174.77 (16) | C10—C11—C15—C14 | −0.1 (3) |
| O6—P2—C3—C4 | 141.91 (17) | C15—C14—C16—C17 | 1.3 (3) |
| O4—P2—C3—C4 | −93.26 (18) | C13—C14—C16—C17 | −179.6 (2) |
| O5—P2—C3—C4 | 25.05 (19) | C14—C16—C17—C18 | 0.6 (3) |
| O6—P2—C3—C2 | −34.34 (19) | C15—N2—C18—C17 | 1.3 (3) |
| O4—P2—C3—C2 | 90.49 (17) | Cu1—N2—C18—C17 | 173.27 (16) |
| O5—P2—C3—C2 | −151.21 (16) | C16—C17—C18—N2 | −2.0 (3) |
| H··· | ||||
| O2—H2···O3iv | 0.84 | 1.81 | 2.489 (2) | 136 |
| O5—H5···O1iii | 0.84 | 1.74 | 2.574 (2) | 173 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2⋯O3i | 0.84 | 1.81 | 2.489 (2) | 136 |
| O5—H5⋯O1ii | 0.84 | 1.74 | 2.574 (2) | 173 |
Symmetry codes: (i) ; (ii) .