| Literature DB >> 21587418 |
Ling-Wei Xue1, Gan-Qing Zhao, Yong-Jun Han, Li-Hua Chen, Qin-Long Peng.
Abstract
In the title complex, [Cu(NCS)(2)(C(12)H(19)N(3))], the Cu(II) atom is five-coordinated in a square-pyramidal geometry defined by one pyridine N, one imine N, and one amine N atom of the tridentate Schiff base ligand and two N-bonded thio-cyanate ions (one of the latter occupying the apical site). The three bridging C atoms and the two terminal C atoms of the Schiff base are disordered over two sets of sites, with occupancies of 0.465 (2) and 0.535 (2).Entities:
Year: 2010 PMID: 21587418 PMCID: PMC2983150 DOI: 10.1107/S1600536810036378
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(NCS)2(C12H19N3)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2747 reflections |
| θ = 2.3–24.5° | |
| µ = 1.48 mm−1 | |
| β = 103.559 (2)° | Block, blue |
| 0.23 × 0.21 × 0.21 mm | |
| Bruker SMART CCD diffractometer | 3816 independent reflections |
| Radiation source: fine-focus sealed tube | 2698 reflections with |
| graphite | |
| ω scans | θmax = 27.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 13886 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3816 reflections | (Δ/σ)max < 0.001 |
| 237 parameters | Δρmax = 0.57 e Å−3 |
| 16 restraints | Δρmin = −0.47 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Cu1 | 0.24814 (3) | 0.82783 (5) | 0.39009 (2) | 0.04378 (15) | |
| N1 | 0.3853 (2) | 0.8651 (4) | 0.36614 (15) | 0.0459 (7) | |
| N2 | 0.2846 (2) | 1.0789 (4) | 0.43585 (14) | 0.0457 (6) | |
| N4 | 0.2763 (2) | 0.7053 (4) | 0.50065 (18) | 0.0594 (8) | |
| N5 | 0.2289 (2) | 0.5969 (5) | 0.33292 (18) | 0.0624 (8) | |
| S1 | 0.2253 (2) | 0.6298 (3) | 0.63328 (10) | 0.1725 (10) | |
| S2 | 0.23557 (7) | 0.28351 (14) | 0.24673 (6) | 0.0611 (3) | |
| C1 | 0.4337 (3) | 0.7542 (6) | 0.3285 (2) | 0.0647 (10) | |
| H1 | 0.4028 | 0.6446 | 0.3090 | 0.078* | |
| C2 | 0.5270 (3) | 0.7936 (7) | 0.3170 (2) | 0.0752 (13) | |
| H2 | 0.5584 | 0.7124 | 0.2904 | 0.090* | |
| C3 | 0.5724 (3) | 0.9539 (7) | 0.3454 (2) | 0.0716 (12) | |
| H3 | 0.6358 | 0.9835 | 0.3388 | 0.086* | |
| C4 | 0.5236 (3) | 1.0714 (6) | 0.3839 (2) | 0.0601 (10) | |
| H4 | 0.5533 | 1.1821 | 0.4032 | 0.072* | |
| C5 | 0.4300 (2) | 1.0238 (5) | 0.39356 (17) | 0.0443 (7) | |
| C6 | 0.3702 (2) | 1.1400 (4) | 0.43399 (18) | 0.0452 (8) | |
| C7 | 0.4155 (3) | 1.3171 (5) | 0.4690 (2) | 0.0701 (12) | |
| H7A | 0.4090 | 1.4104 | 0.4307 | 0.105* | |
| H7B | 0.4851 | 1.2979 | 0.4921 | 0.105* | |
| H7C | 0.3812 | 1.3563 | 0.5065 | 0.105* | |
| N3 | 0.0939 (2) | 0.8665 (4) | 0.36804 (17) | 0.0606 (8) | 0.465 (11) |
| C8 | 0.2202 (3) | 1.1843 (5) | 0.4750 (2) | 0.0684 (11) | 0.465 (11) |
| H8A | 0.2116 | 1.3077 | 0.4538 | 0.082* | 0.465 (11) |
| H8B | 0.2549 | 1.1961 | 0.5276 | 0.082* | 0.465 (11) |
| C9 | 0.1197 (6) | 1.1045 (16) | 0.4713 (5) | 0.062 (3) | 0.465 (11) |
| H9A | 0.0797 | 1.1912 | 0.4924 | 0.074* | 0.465 (11) |
| H9B | 0.1263 | 0.9918 | 0.5009 | 0.074* | 0.465 (11) |
| C10 | 0.0677 (7) | 1.0625 (13) | 0.3896 (5) | 0.056 (3) | 0.465 (11) |
| H10A | 0.0886 | 1.1517 | 0.3566 | 0.067* | 0.465 (11) |
| H10B | −0.0043 | 1.0731 | 0.3830 | 0.067* | 0.465 (11) |
| C11 | 0.053 (3) | 0.696 (4) | 0.396 (2) | 0.092 (10) | 0.465 (11) |
| H11A | −0.0185 | 0.7058 | 0.3873 | 0.138* | 0.465 (11) |
| H11B | 0.0812 | 0.6838 | 0.4496 | 0.138* | 0.465 (11) |
| H11C | 0.0705 | 0.5903 | 0.3705 | 0.138* | 0.465 (11) |
| C12 | 0.066 (3) | 0.888 (6) | 0.2842 (6) | 0.071 (8) | 0.465 (11) |
| H12A | −0.0053 | 0.9054 | 0.2678 | 0.107* | 0.465 (11) |
| H12B | 0.0849 | 0.7789 | 0.2611 | 0.107* | 0.465 (11) |
| H12C | 0.0998 | 0.9931 | 0.2700 | 0.107* | 0.465 (11) |
| N3' | 0.0939 (2) | 0.8665 (4) | 0.36804 (17) | 0.0606 (8) | 0.535 (11) |
| C8' | 0.2202 (3) | 1.1843 (5) | 0.4750 (2) | 0.0684 (11) | 0.535 (11) |
| H8'A | 0.2415 | 1.3124 | 0.4803 | 0.082* | 0.535 (11) |
| H8'B | 0.2252 | 1.1336 | 0.5250 | 0.082* | 0.535 (11) |
| C9' | 0.1099 (5) | 1.1713 (11) | 0.4277 (7) | 0.077 (3) | 0.535 (11) |
| H9'A | 0.0703 | 1.2595 | 0.4484 | 0.093* | 0.535 (11) |
| H9'B | 0.1091 | 1.2112 | 0.3768 | 0.093* | 0.535 (11) |
| C10' | 0.0573 (6) | 0.9862 (12) | 0.4224 (6) | 0.069 (3) | 0.535 (11) |
| H10C | 0.0711 | 0.9278 | 0.4717 | 0.082* | 0.535 (11) |
| H10D | −0.0145 | 1.0035 | 0.4055 | 0.082* | 0.535 (11) |
| C11' | 0.036 (2) | 0.703 (3) | 0.3837 (17) | 0.071 (5) | 0.535 (11) |
| H11D | −0.0346 | 0.7331 | 0.3720 | 0.106* | 0.535 (11) |
| H11E | 0.0569 | 0.6702 | 0.4360 | 0.106* | 0.535 (11) |
| H11F | 0.0467 | 0.6009 | 0.3531 | 0.106* | 0.535 (11) |
| C12' | 0.052 (3) | 0.896 (5) | 0.2860 (6) | 0.071 (7) | 0.535 (11) |
| H12D | −0.0197 | 0.9133 | 0.2770 | 0.106* | 0.535 (11) |
| H12E | 0.0653 | 0.7900 | 0.2584 | 0.106* | 0.535 (11) |
| H12F | 0.0815 | 1.0035 | 0.2697 | 0.106* | 0.535 (11) |
| C13 | 0.2546 (3) | 0.6730 (5) | 0.5551 (2) | 0.0572 (9) | |
| C14 | 0.2316 (2) | 0.4674 (5) | 0.29685 (19) | 0.0481 (8) |
| Cu1 | 0.0369 (2) | 0.0457 (2) | 0.0496 (2) | −0.00511 (18) | 0.01183 (16) | −0.00953 (18) |
| N1 | 0.0412 (15) | 0.0515 (17) | 0.0463 (15) | −0.0058 (12) | 0.0131 (12) | −0.0059 (12) |
| N2 | 0.0448 (16) | 0.0426 (16) | 0.0496 (15) | 0.0014 (13) | 0.0109 (12) | −0.0037 (12) |
| N4 | 0.066 (2) | 0.057 (2) | 0.0533 (18) | −0.0049 (15) | 0.0097 (15) | 0.0003 (15) |
| N5 | 0.0559 (19) | 0.0598 (19) | 0.072 (2) | −0.0085 (16) | 0.0162 (16) | −0.0233 (17) |
| S1 | 0.264 (3) | 0.178 (2) | 0.1026 (12) | −0.0650 (18) | 0.0974 (15) | 0.0160 (12) |
| S2 | 0.0560 (6) | 0.0568 (6) | 0.0762 (6) | −0.0069 (4) | 0.0269 (5) | −0.0187 (5) |
| C1 | 0.055 (2) | 0.078 (3) | 0.064 (2) | −0.011 (2) | 0.0212 (19) | −0.025 (2) |
| C2 | 0.051 (2) | 0.107 (4) | 0.075 (3) | −0.005 (2) | 0.031 (2) | −0.023 (2) |
| C3 | 0.042 (2) | 0.106 (4) | 0.071 (3) | −0.012 (2) | 0.0205 (19) | 0.002 (2) |
| C4 | 0.045 (2) | 0.069 (3) | 0.064 (2) | −0.0139 (19) | 0.0068 (17) | 0.003 (2) |
| C5 | 0.0366 (17) | 0.0494 (19) | 0.0435 (17) | −0.0030 (15) | 0.0024 (13) | 0.0060 (15) |
| C6 | 0.0428 (19) | 0.0389 (18) | 0.0486 (18) | −0.0020 (14) | 0.0004 (14) | 0.0025 (14) |
| C7 | 0.062 (2) | 0.046 (2) | 0.093 (3) | −0.0065 (19) | −0.001 (2) | −0.012 (2) |
| N3 | 0.0378 (16) | 0.073 (2) | 0.069 (2) | −0.0027 (15) | 0.0079 (14) | −0.0122 (17) |
| C8 | 0.069 (3) | 0.059 (2) | 0.079 (3) | 0.009 (2) | 0.023 (2) | −0.021 (2) |
| C9 | 0.062 (6) | 0.061 (7) | 0.078 (7) | 0.003 (5) | 0.047 (5) | −0.009 (5) |
| C10 | 0.034 (5) | 0.066 (7) | 0.072 (6) | 0.017 (4) | 0.019 (4) | 0.007 (5) |
| C11 | 0.019 (8) | 0.155 (18) | 0.096 (19) | −0.026 (9) | 0.003 (9) | 0.037 (10) |
| C12 | 0.032 (9) | 0.105 (17) | 0.065 (12) | −0.007 (8) | −0.012 (8) | 0.027 (10) |
| N3' | 0.0378 (16) | 0.073 (2) | 0.069 (2) | −0.0027 (15) | 0.0079 (14) | −0.0122 (17) |
| C8' | 0.069 (3) | 0.059 (2) | 0.079 (3) | 0.009 (2) | 0.023 (2) | −0.021 (2) |
| C9' | 0.067 (6) | 0.058 (6) | 0.126 (10) | 0.003 (4) | 0.061 (7) | −0.008 (6) |
| C10' | 0.058 (5) | 0.074 (6) | 0.083 (7) | 0.005 (4) | 0.034 (5) | 0.001 (5) |
| C11' | 0.038 (12) | 0.120 (12) | 0.053 (6) | −0.007 (6) | 0.007 (8) | 0.019 (6) |
| C12' | 0.050 (13) | 0.061 (10) | 0.100 (15) | −0.006 (7) | 0.013 (8) | 0.010 (9) |
| C13 | 0.066 (2) | 0.043 (2) | 0.061 (2) | −0.0099 (18) | 0.0108 (19) | 0.0024 (18) |
| C14 | 0.0348 (17) | 0.054 (2) | 0.0550 (19) | −0.0070 (15) | 0.0103 (14) | −0.0051 (17) |
| Cu1—N5 | 1.955 (3) | N3—C11 | 1.494 (9) |
| Cu1—N2 | 2.013 (3) | N3—C10 | 1.537 (7) |
| Cu1—N1 | 2.047 (3) | C8—C9 | 1.483 (7) |
| Cu1—N3 | 2.078 (3) | C8—H8A | 0.9700 |
| Cu1—N4 | 2.153 (3) | C8—H8B | 0.9700 |
| N1—C1 | 1.331 (4) | C9—C10 | 1.525 (9) |
| N1—C5 | 1.343 (4) | C9—H9A | 0.9700 |
| N2—C6 | 1.264 (4) | C9—H9B | 0.9700 |
| N2—C8 | 1.472 (4) | C10—H10A | 0.9700 |
| N4—C13 | 1.126 (4) | C10—H10B | 0.9700 |
| N5—C14 | 1.151 (4) | C11—H11A | 0.9600 |
| S1—C13 | 1.600 (4) | C11—H11B | 0.9600 |
| S2—C14 | 1.622 (4) | C11—H11C | 0.9600 |
| C1—C2 | 1.375 (5) | C12—H12A | 0.9600 |
| C1—H1 | 0.9300 | C12—H12B | 0.9600 |
| C2—C3 | 1.361 (6) | C12—H12C | 0.9600 |
| C2—H2 | 0.9300 | C9'—C10' | 1.514 (9) |
| C3—C4 | 1.373 (5) | C9'—H9'A | 0.9700 |
| C3—H3 | 0.9300 | C9'—H9'B | 0.9700 |
| C4—C5 | 1.380 (5) | C10'—H10C | 0.9700 |
| C4—H4 | 0.9300 | C10'—H10D | 0.9700 |
| C5—C6 | 1.486 (5) | C11'—H11D | 0.9600 |
| C6—C7 | 1.500 (4) | C11'—H11E | 0.9600 |
| C7—H7A | 0.9600 | C11'—H11F | 0.9600 |
| C7—H7B | 0.9600 | C12'—H12D | 0.9600 |
| C7—H7C | 0.9600 | C12'—H12E | 0.9600 |
| N3—C12 | 1.494 (9) | C12'—H12F | 0.9600 |
| N5—Cu1—N2 | 169.17 (12) | C11—N3—Cu1 | 105.6 (16) |
| N5—Cu1—N1 | 90.84 (12) | C10—N3—Cu1 | 111.3 (4) |
| N2—Cu1—N1 | 79.51 (11) | N2—C8—C9 | 115.7 (4) |
| N5—Cu1—N3 | 90.46 (12) | N2—C8—H8A | 108.3 |
| N2—Cu1—N3 | 95.82 (11) | C9—C8—H8A | 108.3 |
| N1—Cu1—N3 | 152.40 (12) | N2—C8—H8B | 108.3 |
| N5—Cu1—N4 | 96.85 (13) | C9—C8—H8B | 108.3 |
| N2—Cu1—N4 | 90.64 (11) | H8A—C8—H8B | 107.4 |
| N1—Cu1—N4 | 106.39 (12) | C8—C9—C10 | 109.8 (7) |
| N3—Cu1—N4 | 100.82 (12) | C8—C9—H9A | 109.7 |
| C1—N1—C5 | 117.9 (3) | C10—C9—H9A | 109.7 |
| C1—N1—Cu1 | 128.7 (3) | C8—C9—H9B | 109.7 |
| C5—N1—Cu1 | 113.4 (2) | C10—C9—H9B | 109.7 |
| C6—N2—C8 | 119.9 (3) | H9A—C9—H9B | 108.2 |
| C6—N2—Cu1 | 116.6 (2) | C9—C10—N3 | 110.5 (7) |
| C8—N2—Cu1 | 123.3 (2) | C9—C10—H10A | 109.5 |
| C13—N4—Cu1 | 152.2 (3) | N3—C10—H10A | 109.5 |
| C14—N5—Cu1 | 169.4 (3) | C9—C10—H10B | 109.5 |
| N1—C1—C2 | 123.3 (4) | N3—C10—H10B | 109.5 |
| N1—C1—H1 | 118.4 | H10A—C10—H10B | 108.1 |
| C2—C1—H1 | 118.4 | N3—C11—H11A | 109.5 |
| C3—C2—C1 | 118.6 (4) | N3—C11—H11B | 109.5 |
| C3—C2—H2 | 120.7 | H11A—C11—H11B | 109.5 |
| C1—C2—H2 | 120.7 | N3—C11—H11C | 109.5 |
| C2—C3—C4 | 119.2 (4) | H11A—C11—H11C | 109.5 |
| C2—C3—H3 | 120.4 | H11B—C11—H11C | 109.5 |
| C4—C3—H3 | 120.4 | N3—C12—H12A | 109.5 |
| C3—C4—C5 | 119.4 (4) | N3—C12—H12B | 109.5 |
| C3—C4—H4 | 120.3 | H12A—C12—H12B | 109.5 |
| C5—C4—H4 | 120.3 | N3—C12—H12C | 109.5 |
| N1—C5—C4 | 121.6 (3) | H12A—C12—H12C | 109.5 |
| N1—C5—C6 | 114.3 (3) | H12B—C12—H12C | 109.5 |
| C4—C5—C6 | 124.1 (3) | C10'—C9'—H9'A | 107.7 |
| N2—C6—C5 | 116.1 (3) | C10'—C9'—H9'B | 107.7 |
| N2—C6—C7 | 125.6 (3) | H9'A—C9'—H9'B | 107.1 |
| C5—C6—C7 | 118.3 (3) | C9'—C10'—H10C | 109.9 |
| C6—C7—H7A | 109.5 | C9'—C10'—H10D | 109.9 |
| C6—C7—H7B | 109.5 | H10C—C10'—H10D | 108.3 |
| H7A—C7—H7B | 109.5 | H11D—C11'—H11E | 109.5 |
| C6—C7—H7C | 109.5 | H11D—C11'—H11F | 109.5 |
| H7A—C7—H7C | 109.5 | H11E—C11'—H11F | 109.5 |
| H7B—C7—H7C | 109.5 | H12D—C12'—H12E | 109.5 |
| C12—N3—C11 | 114 (2) | H12D—C12'—H12F | 109.5 |
| C12—N3—C10 | 98.4 (18) | H12E—C12'—H12F | 109.5 |
| C11—N3—C10 | 122.9 (19) | N4—C13—S1 | 178.9 (4) |
| C12—N3—Cu1 | 102.7 (18) | N5—C14—S2 | 179.4 (3) |
Selected bond lengths (Å)
| Cu1—N5 | 1.955 (3) |
| Cu1—N2 | 2.013 (3) |
| Cu1—N1 | 2.047 (3) |
| Cu1—N3 | 2.078 (3) |
| Cu1—N4 | 2.153 (3) |