Literature DB >> 21587412

Disodium 4,5,6-trihy-droxy-benzene-1,3-disulfonate dihydrate.

E Song1, J Podschun, H Wilberts, U Beginn, H Reuter.   

Abstract

In the title compound, 2Na(+C(6)H(4)O(9)S(2) (2-)·2H(2)O, the benzene rings of the 4,5,6-trihy-droxy-benzene-1,3-disulfonate ions, which are stacked parallel to each other forming rods parallel to the a axis, are slightly deformed (planarity, symmetry) mainly because of the high degree of substitution. The two sodium ions, located within pockets of the anion rods, are coordinated by six and seven O atoms, resulting in octa-hedral and penta-gonal-bipyramidal coordinations, respectively. In addition to these coordinative bonds towards sodium, an extended network of intra- and inter-molecular hydrogen bonds occurs.

Entities:  

Year:  2010        PMID: 21587412      PMCID: PMC2983229          DOI: 10.1107/S1600536810036160

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For synthetic procedures for 3,4,5-trihy­droxy­benzene­sulfonic acid, see: Pješčić et al. (2000 ▶). For the properties and application of cunitic (i.e. wedge-shaped, amphiphilic) gelator molecules,, see: Beginn et al. (2008 ▶); Zhu et al. (2004 ▶, 2006 ▶); Percec et al. (2004 ▶, 2006 ▶). For oxidation processes of pyrogallol, see: Siegel & Siegel (1950 ▶).

Experimental

Crystal data

2Na+·C6H4O9S2 2−·2H2O M = 366.22 Triclinic, a = 6.9282 (4) Å b = 9.1952 (5) Å c = 10.6171 (6) Å α = 68.303 (3)° β = 75.984 (3)° γ = 68.455 (2)° V = 580.10 (6) Å3 Z = 2 Mo Kα radiation μ = 0.60 mm−1 T = 100 K 0.31 × 0.08 × 0.06 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.839, T max = 0.965 24130 measured reflections 2000 independent reflections 1735 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.065 S = 1.09 2000 reflections 192 parameters H-atom parameters constrained Δρmax = 0.46 e Å−3 Δρmin = −0.40 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2008 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810036160/im2221sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810036160/im2221Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2Na+·C6H4O9S22·2H2OZ = 2
Mr = 366.22F(000) = 372
Triclinic, P1Dx = 2.097 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.9282 (4) ÅCell parameters from 9296 reflections
b = 9.1952 (5) Åθ = 2.7–27.8°
c = 10.6171 (6) ŵ = 0.60 mm1
α = 68.303 (3)°T = 100 K
β = 75.984 (3)°Needle, red
γ = 68.455 (2)°0.31 × 0.08 × 0.06 mm
V = 580.10 (6) Å3
Bruker APEXII diffractometer2000 independent reflections
Radiation source: fine-focus sealed tube1735 reflections with I > 2σ(I)
graphiteRint = 0.041
phi and ω scansθmax = 25.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −8→8
Tmin = 0.839, Tmax = 0.965k = −10→10
24130 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.065H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0278P)2 + 0.5372P] where P = (Fo2 + 2Fc2)/3
2000 reflections(Δ/σ)max < 0.001
192 parametersΔρmax = 0.46 e Å3
0 restraintsΔρmin = −0.40 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.1954 (3)0.5924 (3)0.1388 (2)0.0094 (5)
C20.1960 (3)0.4422 (3)0.2347 (2)0.0103 (5)
H20.17300.43210.32910.025 (4)*
C30.2296 (3)0.3064 (3)0.1960 (2)0.0087 (4)
C40.2534 (3)0.3218 (3)0.0577 (2)0.0085 (4)
C50.2577 (3)0.4724 (3)−0.0403 (2)0.0093 (5)
C60.2323 (3)0.6076 (3)−0.0004 (2)0.0092 (5)
O40.2764 (2)0.19739 (17)0.00969 (14)0.0109 (3)
H40.24470.12570.07230.025 (4)*
O50.2915 (2)0.47596 (18)−0.17322 (14)0.0114 (3)
H50.28010.5660−0.22600.025 (4)*
O60.2426 (2)0.75022 (17)−0.10051 (14)0.0120 (3)
H60.24760.8099−0.06350.025 (4)*
S10.15178 (8)0.75784 (6)0.20027 (5)0.00896 (14)
O11−0.0728 (2)0.83560 (18)0.21945 (15)0.0144 (3)
O120.2449 (3)0.68521 (18)0.32711 (16)0.0173 (4)
O130.2611 (2)0.86540 (18)0.09335 (15)0.0163 (4)
S30.25656 (8)0.11379 (6)0.32262 (5)0.00844 (14)
O310.1976 (2)0.14814 (18)0.45258 (15)0.0148 (4)
O320.4746 (2)0.01570 (18)0.30296 (15)0.0124 (3)
O330.1180 (2)0.04470 (18)0.29754 (15)0.0140 (4)
Na1−0.21766 (13)1.04339 (10)0.32841 (8)0.0108 (2)
Na20.59706 (14)0.77666 (10)0.22482 (8)0.0142 (2)
O1−0.2793 (3)1.26461 (18)0.40886 (15)0.0164 (4)
H11−0.38861.29100.45540.045 (5)*
H12−0.19121.24500.45550.045 (5)*
O20.6746 (3)0.62770 (19)0.45172 (16)0.0196 (4)
H210.71980.53530.50110.045 (5)*
H220.73760.67890.46350.045 (5)*
U11U22U33U12U13U23
C10.0076 (11)0.0091 (11)0.0130 (11)−0.0014 (9)−0.0017 (9)−0.0059 (9)
C20.0107 (11)0.0120 (11)0.0087 (11)−0.0023 (10)−0.0006 (9)−0.0054 (9)
C30.0064 (11)0.0092 (11)0.0098 (10)−0.0016 (9)−0.0010 (8)−0.0030 (9)
C40.0051 (10)0.0084 (11)0.0133 (11)−0.0009 (9)−0.0011 (8)−0.0059 (9)
C50.0069 (11)0.0132 (11)0.0087 (11)−0.0024 (9)−0.0008 (8)−0.0053 (9)
C60.0042 (10)0.0092 (11)0.0127 (11)−0.0011 (9)−0.0011 (8)−0.0028 (9)
O40.0170 (8)0.0074 (7)0.0102 (7)−0.0061 (7)0.0003 (6)−0.0037 (6)
O50.0191 (8)0.0080 (8)0.0070 (7)−0.0044 (7)−0.0014 (6)−0.0021 (6)
O60.0189 (9)0.0084 (8)0.0106 (8)−0.0059 (7)−0.0016 (6)−0.0035 (6)
S10.0108 (3)0.0075 (3)0.0104 (3)−0.0026 (2)−0.0010 (2)−0.0052 (2)
O110.0111 (8)0.0151 (8)0.0218 (9)−0.0033 (7)−0.0005 (6)−0.0129 (7)
O120.0253 (9)0.0109 (8)0.0181 (8)−0.0005 (7)−0.0111 (7)−0.0071 (7)
O130.0224 (9)0.0138 (8)0.0161 (8)−0.0104 (7)0.0049 (7)−0.0081 (7)
S30.0103 (3)0.0072 (3)0.0087 (3)−0.0028 (2)−0.0011 (2)−0.0033 (2)
O310.0238 (9)0.0114 (8)0.0091 (8)−0.0051 (7)−0.0012 (7)−0.0042 (6)
O320.0091 (8)0.0099 (8)0.0182 (8)−0.0014 (7)−0.0028 (6)−0.0053 (6)
O330.0125 (8)0.0109 (8)0.0212 (9)−0.0044 (7)−0.0026 (7)−0.0066 (7)
Na10.0119 (4)0.0103 (4)0.0115 (4)−0.0041 (4)−0.0011 (3)−0.0045 (3)
Na20.0184 (5)0.0132 (4)0.0135 (4)−0.0051 (4)0.0000 (4)−0.0079 (4)
O10.0215 (9)0.0143 (8)0.0144 (8)−0.0044 (7)−0.0027 (7)−0.0062 (7)
O20.0266 (10)0.0156 (9)0.0191 (9)−0.0084 (8)−0.0093 (7)−0.0025 (7)
C1—C21.380 (3)S1—O111.4530 (16)
C2—C31.379 (3)S1—O121.4545 (16)
C3—C41.396 (3)S1—O131.4644 (15)
C4—C51.397 (3)O11—Na12.3791 (17)
C5—C61.396 (3)O12—Na22.7178 (18)
C6—C11.399 (3)O13—Na22.7143 (18)
C1—S11.770 (2)S3—O331.4465 (15)
C2—H20.9500S3—O311.4577 (16)
C3—S31.760 (2)S3—O321.4579 (15)
C4—O41.361 (3)Na1—O12.3495 (17)
C5—O51.363 (2)Na2—O22.3695 (17)
C6—O61.363 (2)O1—H110.8056
O4—H40.7979O1—H120.8056
O5—H50.7979O2—H210.8056
O6—H60.7980O2—H220.8056
C2—C1—C6119.77 (19)C1—S1—Na2109.02 (7)
C2—C1—S1117.18 (16)S1—O11—Na1120.84 (8)
C6—C1—S1123.04 (16)S1—O12—Na296.74 (8)
C3—C2—C1121.12 (19)S1—O13—Na296.63 (8)
C3—C2—H2119.4O33—S3—O31113.52 (9)
C1—C2—H2119.4O33—S3—O32111.33 (9)
C4—C3—C2119.84 (19)O31—S3—O32113.24 (9)
C2—C3—S3118.86 (16)O33—S3—C3106.02 (9)
C4—C3—S3121.20 (16)O31—S3—C3105.58 (10)
O4—C4—C3124.23 (18)O32—S3—C3106.43 (9)
O4—C4—C5116.35 (18)O1—Na1—O11165.05 (6)
C5—C4—C3119.41 (19)O1—Na1—S1144.75 (5)
O5—C5—C6123.60 (18)O11—Na1—S121.77 (4)
O5—C5—C4116.09 (19)O2—Na2—O13134.47 (6)
C6—C5—C4120.30 (19)O2—Na2—O1281.64 (5)
O6—C6—C5117.69 (18)O13—Na2—O1253.02 (5)
O6—C6—C1122.94 (19)O2—Na2—S1108.18 (5)
C1—C6—C5119.37 (19)O13—Na2—S126.77 (3)
C4—O4—H4107.7O12—Na2—S126.57 (3)
C5—O5—H5113.1O2—Na2—H2217.3
C6—O6—H6106.5O13—Na2—H22146.5
O11—S1—O12113.02 (9)O12—Na2—H2296.0
O11—S1—O13112.95 (9)S1—Na2—H22122.3
O12—S1—O13112.34 (9)Na1—O1—H11117.6
O11—S1—C1107.38 (9)Na1—O1—H12110.7
O12—S1—C1105.84 (9)H11—O1—H12104.6
O13—S1—C1104.55 (9)Na2—O2—H21141.7
O11—S1—Na2143.60 (6)Na2—O2—H22101.8
O12—S1—Na256.69 (7)H21—O2—H22104.6
O13—S1—Na256.60 (7)
D—H···AD—HH···AD···AD—H···A
O4—H4···O330.802.282.975 (2)146
O4—H4···O13i0.802.282.882 (2)133
O5—H5···O1ii0.801.992.738 (2)156
O6—H6···O130.801.942.686 (2)154
O1—H11···O2iii0.811.992.793 (2)173
O1—H12···O31iv0.812.503.171 (2)141
O1—H12···O12iii0.812.533.080 (2)127
O2—H21···O12v0.812.152.926 (2)162
O2—H22···O31v0.812.303.064 (2)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯O330.802.282.975 (2)146
O4—H4⋯O13i0.802.282.882 (2)133
O5—H5⋯O1ii0.801.992.738 (2)156
O6—H6⋯O130.801.942.686 (2)154
O1—H11⋯O2iii0.811.992.793 (2)173
O1—H12⋯O31iv0.812.503.171 (2)141
O1—H12⋯O12iii0.812.533.080 (2)127
O2—H21⋯O12v0.812.152.926 (2)162
O2—H22⋯O31v0.812.303.064 (2)159

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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1.  Autoxidation of pyrogallol: general characteristics and inhibition by catalase.

Authors:  S M SIEGEL; B Z SIEGEL
Journal:  Nature       Date:  1958-04-19       Impact factor: 49.962

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3.  A short history of SHELX.

Authors:  George M Sheldrick
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4.  Wedge-shaped molecules with a sulfonate group at the tip--a new class of self-assembling amphiphiles.

Authors:  Xiaomin Zhu; Bernd Tartsch; Uwe Beginn; Martin Möller
Journal:  Chemistry       Date:  2004-08-20       Impact factor: 5.236

5.  Synthesis and retrostructural analysis of libraries of AB3 and constitutional isomeric AB2 phenylpropyl ether-based supramolecular dendrimers.

Authors:  Virgil Percec; Mihai Peterca; Monika J Sienkowska; Marc A Ilies; Emad Aqad; Jan Smidrkal; Paul A Heiney
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