| Literature DB >> 21587402 |
Man-Sheng Chen1, Yi-Fang Deng, Chun-Hua Zhang, Dai-Zhi Kuang.
Abstract
The title compound, {[Cd(C(19)Entities:
Year: 2010 PMID: 21587402 PMCID: PMC2983169 DOI: 10.1107/S1600536810036147
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C19H13N4O4)2(H2O)2]·4H2O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 3272 reflections |
| θ = 2.3–25.3° | |
| µ = 0.62 mm−1 | |
| β = 103.801 (2)° | Block, colorless |
| 0.20 × 0.16 × 0.10 mm | |
| Bruker SMART APEX CCD diffractometer | 3867 independent reflections |
| Radiation source: fine-focus sealed tube | 3391 reflections with |
| graphite | |
| phi and ω scans | θmax = 25.8°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 10338 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3867 reflections | (Δ/σ)max = 0.022 |
| 300 parameters | Δρmax = 0.80 e Å−3 |
| 13 restraints | Δρmin = −0.48 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cd1 | 0.0000 | 0.74023 (3) | −0.2500 | 0.03203 (14) | |
| C1 | 0.1391 (2) | 0.6471 (3) | −0.14433 (15) | 0.0341 (8) | |
| C2 | 0.16577 (18) | 0.6286 (3) | −0.07425 (14) | 0.0304 (7) | |
| C3 | 0.21138 (19) | 0.5274 (3) | −0.04962 (15) | 0.0340 (8) | |
| H3A | 0.2266 | 0.4705 | −0.0762 | 0.041* | |
| C4 | 0.23363 (19) | 0.5125 (3) | 0.01481 (16) | 0.0334 (8) | |
| C5 | 0.2124 (2) | 0.5954 (3) | 0.05570 (15) | 0.0360 (8) | |
| H5 | 0.2276 | 0.5832 | 0.0990 | 0.043* | |
| C6 | 0.16780 (19) | 0.6977 (3) | 0.03069 (15) | 0.0312 (7) | |
| C7 | 0.14483 (19) | 0.7127 (3) | −0.03395 (15) | 0.0316 (7) | |
| H7 | 0.1147 | 0.7807 | −0.0505 | 0.038* | |
| C8 | 0.3530 (2) | 0.3931 (3) | 0.03346 (16) | 0.0390 (8) | |
| C9 | 0.3967 (2) | 0.2847 (3) | 0.06802 (18) | 0.0406 (9) | |
| C10 | 0.4431 (2) | 0.2140 (4) | 0.0395 (2) | 0.0550 (11) | |
| H10 | 0.4453 | 0.2292 | −0.0018 | 0.066* | |
| C11 | 0.4868 (3) | 0.1191 (4) | 0.0739 (2) | 0.0638 (13) | |
| H11 | 0.5172 | 0.0701 | 0.0541 | 0.077* | |
| C12 | 0.4417 (3) | 0.1640 (4) | 0.1594 (2) | 0.0609 (12) | |
| H12 | 0.4406 | 0.1472 | 0.2008 | 0.073* | |
| C13 | 0.3957 (3) | 0.2595 (3) | 0.1292 (2) | 0.0532 (11) | |
| H13 | 0.3648 | 0.3054 | 0.1499 | 0.064* | |
| C14 | 0.1521 (2) | 0.7883 (3) | 0.13085 (16) | 0.0372 (8) | |
| C15 | 0.1209 (2) | 0.9006 (3) | 0.15632 (15) | 0.0352 (8) | |
| C16 | 0.1481 (3) | 0.9300 (4) | 0.21868 (17) | 0.0524 (11) | |
| H16 | 0.1864 | 0.8819 | 0.2446 | 0.063* | |
| C17 | 0.1180 (3) | 1.0315 (4) | 0.24232 (18) | 0.0534 (11) | |
| H17 | 0.1380 | 1.0517 | 0.2844 | 0.064* | |
| C18 | 0.0367 (2) | 1.0727 (4) | 0.14846 (17) | 0.0487 (10) | |
| H18 | −0.0018 | 1.1220 | 0.1236 | 0.058* | |
| C19 | 0.0636 (2) | 0.9741 (3) | 0.12058 (17) | 0.0460 (9) | |
| H19 | 0.0433 | 0.9572 | 0.0782 | 0.055* | |
| N1 | 0.4871 (2) | 0.0953 (3) | 0.13331 (19) | 0.0625 (10) | |
| N2 | 0.06210 (18) | 1.1019 (3) | 0.20837 (13) | 0.0398 (7) | |
| N3 | 0.28104 (17) | 0.4100 (3) | 0.04134 (13) | 0.0402 (7) | |
| H3 | 0.2624 | 0.3573 | 0.0632 | 0.048* | |
| N4 | 0.14702 (16) | 0.7905 (3) | 0.06830 (12) | 0.0353 (7) | |
| H4 | 0.1288 | 0.8572 | 0.0491 | 0.042* | |
| O1 | 0.09323 (16) | 0.7351 (2) | −0.16214 (11) | 0.0429 (6) | |
| O2 | 0.16316 (16) | 0.5753 (2) | −0.17948 (11) | 0.0505 (7) | |
| O3 | 0.38414 (17) | 0.4597 (2) | 0.00154 (13) | 0.0585 (8) | |
| O4 | 0.17829 (19) | 0.7016 (2) | 0.16454 (12) | 0.0571 (8) | |
| O5 | 0.07154 (19) | 0.6011 (3) | −0.29733 (14) | 0.0501 (7) | |
| O6 | 0.1941 (3) | 0.3124 (5) | 0.1269 (2) | 0.1053 (14) | |
| O7 | 0.2760 (3) | 0.1472 (3) | 0.20727 (17) | 0.0782 (11) | |
| H5A | 0.050 (2) | 0.539 (3) | −0.3152 (17) | 0.055 (13)* | |
| H7B | 0.299 (3) | 0.154 (6) | 0.2454 (12) | 0.12 (2)* | |
| H7A | 0.283 (3) | 0.073 (2) | 0.198 (2) | 0.11 (2)* | |
| H5B | 0.109 (2) | 0.575 (4) | −0.2698 (18) | 0.088 (19)* | |
| H6B | 0.150 (2) | 0.325 (7) | 0.135 (3) | 0.16 (3)* | |
| H6A | 0.207 (4) | 0.243 (3) | 0.143 (3) | 0.112 (6)* |
| Cd1 | 0.0418 (2) | 0.0269 (2) | 0.0257 (2) | 0.000 | 0.00478 (15) | 0.000 |
| C1 | 0.0364 (19) | 0.0347 (19) | 0.0303 (18) | −0.0015 (16) | 0.0064 (15) | −0.0028 (15) |
| C2 | 0.0296 (17) | 0.0320 (17) | 0.0274 (17) | 0.0024 (14) | 0.0027 (14) | 0.0007 (13) |
| C3 | 0.038 (2) | 0.0279 (18) | 0.0353 (19) | 0.0029 (15) | 0.0069 (16) | −0.0035 (14) |
| C4 | 0.0333 (19) | 0.0292 (18) | 0.0377 (19) | 0.0076 (14) | 0.0082 (15) | 0.0049 (14) |
| C5 | 0.043 (2) | 0.0360 (19) | 0.0276 (18) | 0.0080 (16) | 0.0061 (15) | 0.0047 (14) |
| C6 | 0.0327 (18) | 0.0293 (17) | 0.0324 (18) | 0.0043 (14) | 0.0095 (15) | 0.0024 (14) |
| C7 | 0.0304 (18) | 0.0292 (17) | 0.0348 (18) | 0.0057 (14) | 0.0069 (15) | 0.0022 (14) |
| C8 | 0.045 (2) | 0.0354 (19) | 0.035 (2) | 0.0108 (17) | 0.0064 (17) | 0.0046 (15) |
| C9 | 0.040 (2) | 0.0330 (19) | 0.047 (2) | 0.0070 (16) | 0.0064 (17) | 0.0066 (16) |
| C10 | 0.055 (3) | 0.049 (2) | 0.062 (3) | 0.016 (2) | 0.015 (2) | 0.010 (2) |
| C11 | 0.053 (3) | 0.045 (2) | 0.095 (4) | 0.016 (2) | 0.020 (3) | 0.013 (2) |
| C12 | 0.054 (3) | 0.063 (3) | 0.060 (3) | 0.001 (2) | 0.003 (2) | 0.024 (2) |
| C13 | 0.053 (2) | 0.052 (3) | 0.053 (3) | 0.013 (2) | 0.010 (2) | 0.0152 (19) |
| C14 | 0.041 (2) | 0.0374 (19) | 0.0326 (19) | 0.0035 (16) | 0.0077 (16) | −0.0008 (15) |
| C15 | 0.043 (2) | 0.0338 (18) | 0.0314 (18) | 0.0054 (16) | 0.0139 (16) | 0.0018 (14) |
| C16 | 0.066 (3) | 0.049 (2) | 0.038 (2) | 0.023 (2) | 0.0029 (19) | −0.0039 (18) |
| C17 | 0.071 (3) | 0.054 (3) | 0.030 (2) | 0.014 (2) | 0.0031 (19) | −0.0071 (18) |
| C18 | 0.056 (2) | 0.053 (2) | 0.037 (2) | 0.023 (2) | 0.0090 (18) | 0.0032 (18) |
| C19 | 0.054 (2) | 0.053 (2) | 0.0300 (19) | 0.014 (2) | 0.0076 (17) | −0.0028 (17) |
| N1 | 0.044 (2) | 0.050 (2) | 0.090 (3) | 0.0065 (17) | 0.006 (2) | 0.027 (2) |
| N2 | 0.0495 (19) | 0.0383 (17) | 0.0319 (16) | 0.0079 (14) | 0.0104 (14) | 0.0013 (13) |
| N3 | 0.0494 (19) | 0.0319 (16) | 0.0403 (18) | 0.0120 (14) | 0.0127 (15) | 0.0111 (12) |
| N4 | 0.0453 (18) | 0.0305 (15) | 0.0307 (16) | 0.0105 (13) | 0.0104 (14) | 0.0038 (12) |
| O1 | 0.0536 (16) | 0.0396 (14) | 0.0300 (13) | 0.0159 (12) | −0.0009 (11) | −0.0014 (10) |
| O2 | 0.0682 (19) | 0.0500 (16) | 0.0320 (14) | 0.0208 (14) | 0.0094 (13) | −0.0039 (12) |
| O3 | 0.0618 (18) | 0.0565 (18) | 0.0640 (18) | 0.0204 (15) | 0.0286 (15) | 0.0286 (15) |
| O4 | 0.094 (2) | 0.0429 (15) | 0.0350 (15) | 0.0257 (16) | 0.0179 (15) | 0.0076 (12) |
| O5 | 0.0571 (19) | 0.0382 (16) | 0.0509 (18) | 0.0037 (13) | 0.0048 (14) | −0.0158 (13) |
| O6 | 0.105 (3) | 0.114 (3) | 0.112 (3) | 0.032 (3) | 0.057 (3) | 0.061 (3) |
| O7 | 0.124 (3) | 0.058 (2) | 0.053 (2) | 0.027 (2) | 0.021 (2) | −0.0028 (17) |
| Cd1—O1 | 2.210 (2) | C11—H11 | 0.9300 |
| Cd1—O1i | 2.210 (2) | C12—N1 | 1.318 (5) |
| Cd1—N2ii | 2.331 (3) | C12—C13 | 1.382 (5) |
| Cd1—N2iii | 2.331 (3) | C12—H12 | 0.9300 |
| Cd1—O5i | 2.358 (3) | C13—H13 | 0.9300 |
| Cd1—O5 | 2.358 (3) | C14—O4 | 1.217 (4) |
| C1—O2 | 1.239 (4) | C14—N4 | 1.351 (4) |
| C1—O1 | 1.252 (4) | C14—C15 | 1.498 (5) |
| C1—C2 | 1.507 (4) | C15—C16 | 1.372 (5) |
| C2—C7 | 1.379 (4) | C15—C19 | 1.374 (5) |
| C2—C3 | 1.391 (4) | C16—C17 | 1.376 (5) |
| C3—C4 | 1.380 (4) | C16—H16 | 0.9300 |
| C3—H3A | 0.9300 | C17—N2 | 1.325 (5) |
| C4—C5 | 1.382 (4) | C17—H17 | 0.9300 |
| C4—N3 | 1.428 (4) | C18—N2 | 1.319 (4) |
| C5—C6 | 1.394 (4) | C18—C19 | 1.371 (5) |
| C5—H5 | 0.9300 | C18—H18 | 0.9300 |
| C6—C7 | 1.386 (4) | C19—H19 | 0.9300 |
| C6—N4 | 1.404 (4) | N2—Cd1ii | 2.331 (3) |
| C7—H7 | 0.9300 | N3—H3 | 0.8600 |
| C8—O3 | 1.222 (4) | N4—H4 | 0.8600 |
| C8—N3 | 1.330 (4) | O5—H5A | 0.829 (19) |
| C8—C9 | 1.507 (5) | O5—H5B | 0.83 (3) |
| C9—C13 | 1.372 (6) | O6—H6B | 0.84 (2) |
| C9—C10 | 1.373 (6) | O6—H6A | 0.83 (2) |
| C10—C11 | 1.394 (5) | O7—H7B | 0.84 (2) |
| C10—H10 | 0.9300 | O7—H7A | 0.85 (2) |
| C11—N1 | 1.325 (5) | ||
| O1—Cd1—O1i | 177.13 (12) | C11—C10—H10 | 120.7 |
| O1—Cd1—N2ii | 89.86 (9) | N1—C11—C10 | 123.1 (4) |
| O1i—Cd1—N2ii | 92.25 (10) | N1—C11—H11 | 118.5 |
| O1—Cd1—N2iii | 92.25 (10) | C10—C11—H11 | 118.5 |
| O1i—Cd1—N2iii | 89.86 (9) | N1—C12—C13 | 124.4 (4) |
| N2ii—Cd1—N2iii | 85.36 (15) | N1—C12—H12 | 117.8 |
| O1—Cd1—O5i | 87.95 (10) | C13—C12—H12 | 117.8 |
| O1i—Cd1—O5i | 90.21 (10) | C9—C13—C12 | 118.2 (4) |
| N2ii—Cd1—O5i | 87.17 (11) | C9—C13—H13 | 120.9 |
| N2iii—Cd1—O5i | 172.53 (10) | C12—C13—H13 | 120.9 |
| O1—Cd1—O5 | 90.21 (10) | O4—C14—N4 | 123.5 (3) |
| O1i—Cd1—O5 | 87.95 (10) | O4—C14—C15 | 121.6 (3) |
| N2ii—Cd1—O5 | 172.53 (10) | N4—C14—C15 | 114.9 (3) |
| N2iii—Cd1—O5 | 87.17 (11) | C16—C15—C19 | 117.8 (3) |
| O5i—Cd1—O5 | 100.30 (15) | C16—C15—C14 | 119.2 (3) |
| O2—C1—O1 | 125.3 (3) | C19—C15—C14 | 123.0 (3) |
| O2—C1—C2 | 118.7 (3) | C15—C16—C17 | 119.1 (4) |
| O1—C1—C2 | 116.1 (3) | C15—C16—H16 | 120.5 |
| C7—C2—C3 | 119.5 (3) | C17—C16—H16 | 120.5 |
| C7—C2—C1 | 119.8 (3) | N2—C17—C16 | 123.5 (4) |
| C3—C2—C1 | 120.7 (3) | N2—C17—H17 | 118.2 |
| C4—C3—C2 | 119.0 (3) | C16—C17—H17 | 118.2 |
| C4—C3—H3A | 120.5 | N2—C18—C19 | 124.0 (3) |
| C2—C3—H3A | 120.5 | N2—C18—H18 | 118.0 |
| C3—C4—C5 | 122.1 (3) | C19—C18—H18 | 118.0 |
| C3—C4—N3 | 120.2 (3) | C15—C19—C18 | 118.9 (3) |
| C5—C4—N3 | 117.7 (3) | C15—C19—H19 | 120.5 |
| C4—C5—C6 | 118.5 (3) | C18—C19—H19 | 120.5 |
| C4—C5—H5 | 120.7 | C12—N1—C11 | 117.0 (4) |
| C6—C5—H5 | 120.7 | C18—N2—C17 | 116.7 (3) |
| C7—C6—C5 | 119.6 (3) | C18—N2—Cd1ii | 119.1 (2) |
| C7—C6—N4 | 117.5 (3) | C17—N2—Cd1ii | 124.0 (2) |
| C5—C6—N4 | 122.9 (3) | C8—N3—C4 | 122.4 (3) |
| C2—C7—C6 | 121.2 (3) | C8—N3—H3 | 118.8 |
| C2—C7—H7 | 119.4 | C4—N3—H3 | 118.8 |
| C6—C7—H7 | 119.4 | C14—N4—C6 | 128.2 (3) |
| O3—C8—N3 | 124.2 (3) | C14—N4—H4 | 115.9 |
| O3—C8—C9 | 120.3 (3) | C6—N4—H4 | 115.9 |
| N3—C8—C9 | 115.5 (3) | C1—O1—Cd1 | 125.4 (2) |
| C13—C9—C10 | 118.7 (3) | Cd1—O5—H5A | 120 (3) |
| C13—C9—C8 | 121.5 (3) | Cd1—O5—H5B | 109 (3) |
| C10—C9—C8 | 119.7 (4) | H5A—O5—H5B | 105 (4) |
| C9—C10—C11 | 118.6 (4) | H6B—O6—H6A | 104 (6) |
| C9—C10—H10 | 120.7 | H7B—O7—H7A | 104 (5) |
| O2—C1—C2—C7 | 175.0 (3) | O4—C14—C15—C19 | −151.8 (4) |
| O1—C1—C2—C7 | −5.5 (5) | N4—C14—C15—C19 | 26.8 (5) |
| O2—C1—C2—C3 | −5.1 (5) | C19—C15—C16—C17 | −0.9 (6) |
| O1—C1—C2—C3 | 174.5 (3) | C14—C15—C16—C17 | −178.5 (4) |
| C7—C2—C3—C4 | 1.0 (5) | C15—C16—C17—N2 | 1.8 (7) |
| C1—C2—C3—C4 | −179.0 (3) | C16—C15—C19—C18 | 0.3 (6) |
| C2—C3—C4—C5 | −0.4 (5) | C14—C15—C19—C18 | 177.8 (4) |
| C2—C3—C4—N3 | −179.4 (3) | N2—C18—C19—C15 | −0.5 (6) |
| C3—C4—C5—C6 | −0.7 (5) | C13—C12—N1—C11 | −1.2 (7) |
| N3—C4—C5—C6 | 178.4 (3) | C10—C11—N1—C12 | 1.9 (7) |
| C4—C5—C6—C7 | 1.1 (5) | C19—C18—N2—C17 | 1.3 (6) |
| C4—C5—C6—N4 | −176.4 (3) | C19—C18—N2—Cd1ii | −173.3 (3) |
| C3—C2—C7—C6 | −0.6 (5) | C16—C17—N2—C18 | −1.9 (6) |
| C1—C2—C7—C6 | 179.4 (3) | C16—C17—N2—Cd1ii | 172.4 (3) |
| C5—C6—C7—C2 | −0.5 (5) | O3—C8—N3—C4 | −2.7 (6) |
| N4—C6—C7—C2 | 177.1 (3) | C9—C8—N3—C4 | 176.3 (3) |
| O3—C8—C9—C13 | 135.5 (4) | C3—C4—N3—C8 | 62.3 (5) |
| N3—C8—C9—C13 | −43.5 (5) | C5—C4—N3—C8 | −116.8 (4) |
| O3—C8—C9—C10 | −40.0 (5) | O4—C14—N4—C6 | 1.7 (6) |
| N3—C8—C9—C10 | 141.0 (4) | C15—C14—N4—C6 | −176.9 (3) |
| C13—C9—C10—C11 | 0.4 (6) | C7—C6—N4—C14 | 169.1 (3) |
| C8—C9—C10—C11 | 176.0 (4) | C5—C6—N4—C14 | −13.4 (6) |
| C9—C10—C11—N1 | −1.5 (7) | O2—C1—O1—Cd1 | 31.5 (5) |
| C10—C9—C13—C12 | 0.2 (6) | C2—C1—O1—Cd1 | −148.0 (2) |
| C8—C9—C13—C12 | −175.3 (4) | N2ii—Cd1—O1—C1 | 160.5 (3) |
| N1—C12—C13—C9 | 0.2 (7) | N2iii—Cd1—O1—C1 | −114.2 (3) |
| O4—C14—C15—C16 | 25.7 (6) | O5i—Cd1—O1—C1 | 73.3 (3) |
| N4—C14—C15—C16 | −155.7 (3) | O5—Cd1—O1—C1 | −27.0 (3) |
| H··· | ||||
| N3—H3···O6 | 0.86 | 2.10 | 2.885 (5) | 151 |
| N4—H4···O3iv | 0.86 | 2.26 | 3.096 (4) | 164 |
| O5—H5B···O2 | 0.83 (3) | 1.98 (3) | 2.710 (4) | 145 (4) |
| O5—H5A···N1v | 0.83 (2) | 2.00 (2) | 2.825 (4) | 172 (4) |
| O6—H6B···O5vi | 0.84 (2) | 2.40 (4) | 3.163 (6) | 151 (6) |
| O6—H6A···O7 | 0.82 (3) | 1.92 (4) | 2.681 (6) | 148 (5) |
| O7—H7A···O2vii | 0.85 (2) | 1.96 (3) | 2.767 (4) | 162 (5) |
| O7—H7B···O4viii | 0.84 (2) | 1.99 (3) | 2.791 (4) | 159 (6) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3⋯O6 | 0.86 | 2.10 | 2.885 (5) | 151 |
| N4—H4⋯O3i | 0.86 | 2.26 | 3.096 (4) | 164 |
| O5—H5 | 0.83 (3) | 1.98 (3) | 2.710 (4) | 145 (4) |
| O5—H5 | 0.83 (2) | 2.00 (2) | 2.825 (4) | 172 (4) |
| O6—H6 | 0.84 (2) | 2.40 (4) | 3.163 (6) | 151 (6) |
| O6—H6 | 0.82 (3) | 1.92 (4) | 2.681 (6) | 148 (5) |
| O7—H7 | 0.85 (2) | 1.96 (3) | 2.767 (4) | 162 (5) |
| O7—H7 | 0.84 (2) | 1.99 (3) | 2.791 (4) | 159 (6) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .