| Literature DB >> 21587385 |
Abstract
The crystal structure of the title complex, [class="Chemical">Gd(C(8)H(3)NO(6))(C(8)H(4)NO(6))(C(12)Entities:
Year: 2010 PMID: 21587385 PMCID: PMC2983181 DOI: 10.1107/S1600536810035452
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Gd(C8H3NO6)(C8H4NO6)(C12H8N2)] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 5111 reflections | |
| θ = 2.6–27.7° | |
| µ = 2.48 mm−1 | |
| α = 70.581 (4)° | |
| β = 85.925 (4)° | Prism, colorless |
| γ = 76.512 (2)° | 0.28 × 0.26 × 0.22 mm |
| Bruker SMART CCD area-detector diffractometer | 4860 independent reflections |
| Radiation source: fine-focus sealed tube | 4259 reflections with |
| graphite | |
| φ and ω scan | θmax = 25.3°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 6896 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4837 reflections | (Δ/σ)max < 0.001 |
| 407 parameters | Δρmax = 2.51 e Å−3 |
| 0 restraints | Δρmin = −2.59 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 1.0366 (7) | 0.0929 (6) | 0.6625 (5) | 0.0330 (14) | |
| C2 | 1.0511 (6) | 0.1117 (6) | 0.7766 (5) | 0.0308 (13) | |
| C3 | 1.1673 (7) | 0.0513 (6) | 0.8416 (6) | 0.0407 (16) | |
| H3 | 1.2371 | 0.0040 | 0.8132 | 0.049* | |
| C4 | 1.1762 (8) | 0.0635 (7) | 0.9504 (6) | 0.0465 (18) | |
| C5 | 1.0753 (7) | 0.1320 (6) | 0.9960 (6) | 0.0423 (16) | |
| H5 | 1.0841 | 0.1378 | 1.0694 | 0.051* | |
| C6 | 0.9615 (7) | 0.1914 (7) | 0.9309 (6) | 0.0419 (16) | |
| C7 | 0.9488 (7) | 0.1835 (6) | 0.8200 (6) | 0.0374 (15) | |
| H7 | 0.8723 | 0.2261 | 0.7755 | 0.045* | |
| C8 | 0.8451 (9) | 0.2616 (8) | 0.9788 (7) | 0.057 (2) | |
| C9 | 0.5970 (6) | 0.1875 (6) | 0.3097 (5) | 0.0292 (13) | |
| C10 | 0.4627 (6) | 0.2185 (5) | 0.2498 (5) | 0.0270 (12) | |
| C11 | 0.4353 (6) | 0.3072 (6) | 0.1421 (5) | 0.0321 (13) | |
| H11 | 0.5013 | 0.3440 | 0.0995 | 0.039* | |
| C12 | 0.3063 (6) | 0.3388 (6) | 0.1007 (5) | 0.0328 (14) | |
| C13 | 0.2038 (6) | 0.2870 (6) | 0.1622 (5) | 0.0314 (13) | |
| H13 | 0.1169 | 0.3128 | 0.1331 | 0.038* | |
| C14 | 0.2355 (6) | 0.1959 (5) | 0.2679 (5) | 0.0256 (12) | |
| C15 | 0.3643 (6) | 0.1606 (5) | 0.3105 (5) | 0.0279 (12) | |
| H15 | 0.3858 | 0.0976 | 0.3804 | 0.033* | |
| C17 | 0.5715 (9) | 0.1824 (8) | 0.6347 (8) | 0.061 (2) | |
| H17 | 0.5663 | 0.1088 | 0.6280 | 0.073* | |
| C18 | 0.4954 (10) | 0.2208 (11) | 0.7209 (9) | 0.085 (4) | |
| H18 | 0.4424 | 0.1727 | 0.7704 | 0.103* | |
| C19 | 0.4993 (10) | 0.3254 (11) | 0.7313 (9) | 0.081 (3) | |
| H19 | 0.4484 | 0.3519 | 0.7878 | 0.097* | |
| C20 | 0.5823 (9) | 0.3984 (9) | 0.6552 (8) | 0.064 (3) | |
| C21 | 0.5923 (12) | 0.5114 (12) | 0.6605 (11) | 0.091 (4) | |
| H21 | 0.5419 | 0.5420 | 0.7148 | 0.109* | |
| C22 | 0.6719 (14) | 0.5746 (11) | 0.5897 (12) | 0.096 (4) | |
| H22 | 0.6781 | 0.6476 | 0.5973 | 0.115* | |
| C23 | 0.7507 (11) | 0.5337 (9) | 0.4998 (10) | 0.074 (3) | |
| C24 | 0.8317 (13) | 0.5984 (10) | 0.4198 (12) | 0.095 (4) | |
| H24 | 0.8409 | 0.6722 | 0.4234 | 0.114* | |
| C25 | 0.8966 (12) | 0.5558 (9) | 0.3378 (11) | 0.088 (3) | |
| H25 | 0.9508 | 0.5991 | 0.2843 | 0.106* | |
| C26 | 0.8809 (9) | 0.4432 (7) | 0.3339 (8) | 0.057 (2) | |
| H26 | 0.9240 | 0.4151 | 0.2753 | 0.068* | |
| C27 | 0.7400 (8) | 0.4227 (7) | 0.4915 (7) | 0.0451 (18) | |
| C28 | 0.6557 (7) | 0.3526 (7) | 0.5716 (6) | 0.0447 (18) | |
| Gd1 | 0.82752 (3) | 0.14792 (3) | 0.44144 (2) | 0.02604 (13) | |
| N1 | 1.2997 (8) | −0.0016 (8) | 1.0209 (7) | 0.072 (2) | |
| N2 | 0.2724 (6) | 0.4320 (6) | −0.0147 (5) | 0.0500 (16) | |
| N3 | 0.6506 (6) | 0.2452 (5) | 0.5622 (5) | 0.0448 (15) | |
| N4 | 0.8089 (6) | 0.3768 (5) | 0.4088 (5) | 0.0414 (14) | |
| O1 | 0.9505 (5) | 0.1690 (4) | 0.5913 (4) | 0.0412 (11) | |
| O2 | 1.1124 (5) | 0.0033 (5) | 0.6459 (4) | 0.0466 (12) | |
| O3 | 1.3864 (8) | −0.0642 (9) | 0.9807 (8) | 0.118 (4) | |
| O4 | 1.3055 (9) | 0.0089 (8) | 1.1154 (7) | 0.113 (3) | |
| O5 | 0.8641 (6) | 0.2486 (6) | 1.0881 (5) | 0.0647 (16) | |
| H5A | 0.7931 | 0.2735 | 1.1164 | 0.097* | |
| O6 | 0.7481 (8) | 0.3226 (11) | 0.9241 (7) | 0.140 (5) | |
| O7 | 0.6825 (4) | 0.2498 (4) | 0.2637 (4) | 0.0335 (10) | |
| O8 | 0.6158 (4) | 0.1067 (4) | 0.4063 (4) | 0.0413 (11) | |
| O9 | 0.3605 (6) | 0.4789 (5) | −0.0694 (5) | 0.0593 (15) | |
| O10 | 0.1591 (7) | 0.4607 (8) | −0.0498 (6) | 0.103 (3) | |
| C16 | 0.1297 (6) | 0.1363 (6) | 0.3374 (5) | 0.0300 (13) | |
| O11 | 0.0114 (4) | 0.1968 (4) | 0.3252 (4) | 0.0421 (11) | |
| O12 | 0.1665 (5) | 0.0297 (4) | 0.4038 (4) | 0.0448 (12) |
| C1 | 0.038 (4) | 0.044 (4) | 0.022 (3) | −0.013 (3) | −0.002 (3) | −0.014 (3) |
| C2 | 0.039 (4) | 0.037 (3) | 0.020 (3) | −0.010 (3) | −0.004 (3) | −0.012 (3) |
| C3 | 0.039 (4) | 0.048 (4) | 0.032 (4) | −0.001 (3) | −0.007 (3) | −0.013 (3) |
| C4 | 0.047 (4) | 0.059 (5) | 0.030 (4) | −0.007 (3) | −0.014 (3) | −0.010 (3) |
| C5 | 0.055 (4) | 0.052 (4) | 0.023 (3) | −0.011 (3) | −0.004 (3) | −0.016 (3) |
| C6 | 0.049 (4) | 0.053 (4) | 0.025 (4) | −0.010 (3) | 0.001 (3) | −0.016 (3) |
| C7 | 0.043 (4) | 0.052 (4) | 0.020 (3) | −0.010 (3) | −0.002 (3) | −0.014 (3) |
| C8 | 0.055 (5) | 0.080 (6) | 0.041 (5) | 0.001 (4) | 0.000 (4) | −0.038 (4) |
| C9 | 0.019 (3) | 0.044 (4) | 0.024 (3) | −0.006 (2) | −0.001 (2) | −0.012 (3) |
| C10 | 0.020 (3) | 0.039 (3) | 0.021 (3) | −0.005 (2) | 0.000 (2) | −0.009 (3) |
| C11 | 0.025 (3) | 0.045 (4) | 0.024 (3) | −0.011 (3) | 0.004 (2) | −0.006 (3) |
| C12 | 0.038 (4) | 0.041 (3) | 0.017 (3) | −0.015 (3) | 0.000 (3) | −0.002 (3) |
| C13 | 0.024 (3) | 0.046 (4) | 0.024 (3) | −0.007 (3) | −0.001 (2) | −0.011 (3) |
| C14 | 0.023 (3) | 0.035 (3) | 0.019 (3) | −0.008 (2) | 0.001 (2) | −0.008 (2) |
| C15 | 0.027 (3) | 0.036 (3) | 0.019 (3) | −0.006 (2) | −0.002 (2) | −0.006 (3) |
| C17 | 0.054 (5) | 0.060 (5) | 0.057 (6) | −0.004 (4) | 0.025 (4) | −0.014 (4) |
| C18 | 0.073 (7) | 0.093 (8) | 0.062 (7) | 0.011 (6) | 0.037 (5) | −0.014 (6) |
| C19 | 0.070 (7) | 0.101 (8) | 0.052 (6) | 0.010 (6) | 0.029 (5) | −0.024 (6) |
| C20 | 0.065 (6) | 0.072 (6) | 0.053 (5) | 0.019 (4) | −0.007 (4) | −0.039 (5) |
| C21 | 0.084 (8) | 0.117 (10) | 0.088 (9) | −0.001 (7) | 0.008 (7) | −0.071 (8) |
| C22 | 0.113 (10) | 0.080 (7) | 0.116 (10) | 0.008 (7) | −0.021 (8) | −0.075 (8) |
| C23 | 0.089 (7) | 0.057 (5) | 0.079 (7) | −0.002 (5) | −0.022 (6) | −0.033 (5) |
| C24 | 0.114 (10) | 0.056 (6) | 0.128 (11) | −0.026 (6) | −0.008 (8) | −0.039 (7) |
| C25 | 0.106 (9) | 0.049 (5) | 0.099 (9) | −0.029 (5) | 0.006 (7) | −0.004 (6) |
| C26 | 0.072 (6) | 0.041 (4) | 0.050 (5) | −0.014 (4) | 0.002 (4) | −0.006 (4) |
| C27 | 0.047 (4) | 0.041 (4) | 0.047 (5) | 0.002 (3) | −0.015 (4) | −0.019 (3) |
| C28 | 0.038 (4) | 0.054 (5) | 0.036 (4) | 0.004 (3) | −0.005 (3) | −0.017 (4) |
| Gd1 | 0.02026 (18) | 0.0381 (2) | 0.01841 (18) | −0.00571 (12) | 0.00062 (11) | −0.00808 (13) |
| N1 | 0.068 (5) | 0.094 (6) | 0.053 (5) | 0.011 (4) | −0.035 (4) | −0.034 (4) |
| N2 | 0.049 (4) | 0.065 (4) | 0.023 (3) | −0.016 (3) | −0.006 (3) | 0.006 (3) |
| N3 | 0.041 (3) | 0.051 (4) | 0.036 (3) | 0.003 (3) | 0.011 (3) | −0.017 (3) |
| N4 | 0.046 (3) | 0.042 (3) | 0.030 (3) | −0.004 (3) | −0.002 (3) | −0.007 (3) |
| O1 | 0.052 (3) | 0.048 (3) | 0.026 (2) | −0.009 (2) | −0.013 (2) | −0.014 (2) |
| O2 | 0.043 (3) | 0.059 (3) | 0.046 (3) | −0.004 (2) | −0.002 (2) | −0.031 (3) |
| O3 | 0.082 (5) | 0.163 (8) | 0.098 (6) | 0.055 (6) | −0.056 (5) | −0.072 (6) |
| O4 | 0.113 (6) | 0.153 (8) | 0.066 (5) | 0.039 (6) | −0.060 (5) | −0.058 (5) |
| O5 | 0.060 (4) | 0.104 (5) | 0.033 (3) | −0.009 (3) | 0.009 (3) | −0.035 (3) |
| O6 | 0.092 (6) | 0.236 (11) | 0.086 (6) | 0.077 (7) | −0.041 (5) | −0.112 (7) |
| O7 | 0.027 (2) | 0.044 (2) | 0.024 (2) | −0.0110 (18) | −0.0016 (18) | −0.0002 (19) |
| O8 | 0.026 (2) | 0.056 (3) | 0.030 (3) | −0.014 (2) | −0.0062 (19) | 0.006 (2) |
| O9 | 0.060 (4) | 0.069 (4) | 0.031 (3) | −0.023 (3) | 0.008 (3) | 0.012 (3) |
| O10 | 0.065 (5) | 0.137 (7) | 0.063 (5) | −0.040 (4) | −0.032 (4) | 0.044 (4) |
| C16 | 0.032 (3) | 0.045 (4) | 0.014 (3) | −0.013 (3) | 0.001 (2) | −0.009 (3) |
| O11 | 0.026 (2) | 0.056 (3) | 0.040 (3) | −0.012 (2) | 0.008 (2) | −0.010 (2) |
| O12 | 0.040 (3) | 0.054 (3) | 0.032 (3) | −0.021 (2) | −0.005 (2) | 0.004 (2) |
| C1—O2 | 1.242 (8) | C19—H19 | 0.9300 |
| C1—O1 | 1.256 (8) | C20—C28 | 1.405 (10) |
| C1—C2 | 1.500 (8) | C20—C21 | 1.411 (16) |
| C2—C3 | 1.390 (9) | C21—C22 | 1.322 (18) |
| C2—C7 | 1.391 (9) | C21—H21 | 0.9300 |
| C3—C4 | 1.390 (10) | C22—C23 | 1.463 (16) |
| C3—H3 | 0.9300 | C22—H22 | 0.9300 |
| C4—C5 | 1.374 (10) | C23—C24 | 1.391 (16) |
| C4—N1 | 1.487 (10) | C23—C27 | 1.402 (12) |
| C5—C6 | 1.370 (10) | C24—C25 | 1.338 (16) |
| C5—H5 | 0.9300 | C24—H24 | 0.9300 |
| C6—C7 | 1.399 (9) | C25—C26 | 1.417 (13) |
| C6—C8 | 1.498 (10) | C25—H25 | 0.9300 |
| C7—H7 | 0.9300 | C26—N4 | 1.309 (10) |
| C8—O6 | 1.187 (10) | C26—H26 | 0.9300 |
| C8—O5 | 1.308 (9) | C27—N4 | 1.380 (9) |
| C9—O8 | 1.243 (8) | C27—C28 | 1.445 (11) |
| C9—O7 | 1.268 (7) | C28—N3 | 1.348 (9) |
| C9—C10 | 1.519 (8) | Gd1—O12i | 2.322 (5) |
| C10—C11 | 1.383 (9) | Gd1—O2ii | 2.342 (4) |
| C10—C15 | 1.392 (8) | Gd1—O11iii | 2.349 (4) |
| C11—C12 | 1.376 (9) | Gd1—O1 | 2.403 (4) |
| C11—H11 | 0.9300 | Gd1—O8 | 2.442 (4) |
| C12—C13 | 1.396 (9) | Gd1—O7 | 2.499 (4) |
| C12—N2 | 1.479 (8) | Gd1—N3 | 2.571 (5) |
| C13—C14 | 1.383 (9) | Gd1—N4 | 2.611 (6) |
| C13—H13 | 0.9300 | N1—O4 | 1.204 (9) |
| C14—C15 | 1.378 (8) | N1—O3 | 1.214 (10) |
| C14—C16 | 1.498 (8) | N2—O10 | 1.204 (9) |
| C15—H15 | 0.9300 | N2—O9 | 1.220 (8) |
| C17—N3 | 1.324 (11) | O2—Gd1ii | 2.342 (4) |
| C17—C18 | 1.401 (12) | O5—H5A | 0.8200 |
| C17—H17 | 0.9300 | C16—O12 | 1.252 (8) |
| C18—C19 | 1.316 (16) | C16—O11 | 1.257 (7) |
| C18—H18 | 0.9300 | O11—Gd1iv | 2.349 (4) |
| C19—C20 | 1.434 (15) | O12—Gd1i | 2.322 (5) |
| O2—C1—O1 | 125.4 (6) | C25—C24—C23 | 120.8 (10) |
| O2—C1—C2 | 116.8 (6) | C25—C24—H24 | 119.6 |
| O1—C1—C2 | 117.8 (6) | C23—C24—H24 | 119.6 |
| C3—C2—C7 | 120.1 (6) | C24—C25—C26 | 118.6 (10) |
| C3—C2—C1 | 118.6 (6) | C24—C25—H25 | 120.7 |
| C7—C2—C1 | 121.3 (6) | C26—C25—H25 | 120.7 |
| C4—C3—C2 | 118.1 (6) | N4—C26—C25 | 123.3 (9) |
| C4—C3—H3 | 121.0 | N4—C26—H26 | 118.3 |
| C2—C3—H3 | 121.0 | C25—C26—H26 | 118.3 |
| C5—C4—C3 | 122.9 (7) | N4—C27—C23 | 121.9 (9) |
| C5—C4—N1 | 118.7 (6) | N4—C27—C28 | 118.2 (6) |
| C3—C4—N1 | 118.4 (7) | C23—C27—C28 | 119.9 (8) |
| C6—C5—C4 | 118.5 (6) | N3—C28—C20 | 122.7 (8) |
| C6—C5—H5 | 120.8 | N3—C28—C27 | 118.0 (6) |
| C4—C5—H5 | 120.8 | C20—C28—C27 | 119.4 (8) |
| C5—C6—C7 | 120.7 (7) | O12i—Gd1—O2ii | 76.27 (19) |
| C5—C6—C8 | 120.9 (6) | O12i—Gd1—O11iii | 124.82 (17) |
| C7—C6—C8 | 118.3 (7) | O2ii—Gd1—O11iii | 76.07 (18) |
| C2—C7—C6 | 119.7 (6) | O12i—Gd1—O1 | 75.73 (17) |
| C2—C7—H7 | 120.1 | O2ii—Gd1—O1 | 126.15 (17) |
| C6—C7—H7 | 120.1 | O11iii—Gd1—O1 | 83.73 (17) |
| O6—C8—O5 | 124.0 (7) | O12i—Gd1—O8 | 80.85 (15) |
| O6—C8—C6 | 124.2 (7) | O2ii—Gd1—O8 | 75.42 (17) |
| O5—C8—C6 | 111.8 (7) | O11iii—Gd1—O8 | 134.60 (16) |
| O8—C9—O7 | 122.3 (5) | O1—Gd1—O8 | 141.63 (17) |
| O8—C9—C10 | 118.4 (5) | O12i—Gd1—O7 | 132.49 (15) |
| O7—C9—C10 | 119.1 (5) | O2ii—Gd1—O7 | 81.73 (16) |
| C11—C10—C15 | 120.8 (5) | O11iii—Gd1—O7 | 88.64 (15) |
| C11—C10—C9 | 121.4 (5) | O1—Gd1—O7 | 147.63 (16) |
| C15—C10—C9 | 117.6 (5) | O8—Gd1—O7 | 52.84 (14) |
| C12—C11—C10 | 117.3 (6) | O12i—Gd1—N3 | 84.99 (19) |
| C12—C11—H11 | 121.4 | O2ii—Gd1—N3 | 145.6 (2) |
| C10—C11—H11 | 121.4 | O11iii—Gd1—N3 | 137.47 (19) |
| C11—C12—C13 | 123.4 (6) | O1—Gd1—N3 | 74.72 (18) |
| C11—C12—N2 | 119.3 (6) | O8—Gd1—N3 | 73.32 (19) |
| C13—C12—N2 | 117.3 (6) | O7—Gd1—N3 | 90.53 (17) |
| C14—C13—C12 | 117.9 (6) | O12i—Gd1—N4 | 138.41 (18) |
| C14—C13—H13 | 121.1 | O2ii—Gd1—N4 | 144.26 (19) |
| C12—C13—H13 | 121.1 | O11iii—Gd1—N4 | 74.83 (18) |
| C15—C14—C13 | 120.1 (5) | O1—Gd1—N4 | 70.35 (17) |
| C15—C14—C16 | 119.7 (5) | O8—Gd1—N4 | 112.27 (17) |
| C13—C14—C16 | 120.2 (5) | O7—Gd1—N4 | 77.29 (16) |
| C14—C15—C10 | 120.5 (6) | N3—Gd1—N4 | 63.6 (2) |
| C14—C15—H15 | 119.8 | O4—N1—O3 | 124.4 (8) |
| C10—C15—H15 | 119.8 | O4—N1—C4 | 117.7 (8) |
| N3—C17—C18 | 123.5 (10) | O3—N1—C4 | 117.9 (7) |
| N3—C17—H17 | 118.2 | O10—N2—O9 | 122.6 (6) |
| C18—C17—H17 | 118.2 | O10—N2—C12 | 119.1 (6) |
| C19—C18—C17 | 119.6 (10) | O9—N2—C12 | 118.3 (6) |
| C19—C18—H18 | 120.2 | C17—N3—C28 | 117.6 (6) |
| C17—C18—H18 | 120.2 | C17—N3—Gd1 | 121.2 (5) |
| C18—C19—C20 | 119.8 (8) | C28—N3—Gd1 | 119.7 (5) |
| C18—C19—H19 | 120.1 | C26—N4—C27 | 117.6 (7) |
| C20—C19—H19 | 120.1 | C26—N4—Gd1 | 124.1 (5) |
| C28—C20—C21 | 119.8 (10) | C27—N4—Gd1 | 116.9 (5) |
| C28—C20—C19 | 116.8 (9) | C1—O1—Gd1 | 130.5 (4) |
| C21—C20—C19 | 123.4 (9) | C1—O2—Gd1ii | 153.7 (4) |
| C22—C21—C20 | 121.3 (10) | C8—O5—H5A | 109.5 |
| C22—C21—H21 | 119.4 | C9—O7—Gd1 | 90.7 (3) |
| C20—C21—H21 | 119.4 | C9—O8—Gd1 | 94.0 (4) |
| C21—C22—C23 | 122.2 (10) | O12—C16—O11 | 124.9 (6) |
| C21—C22—H22 | 118.9 | O12—C16—C14 | 117.3 (5) |
| C23—C22—H22 | 118.9 | O11—C16—C14 | 117.8 (6) |
| C24—C23—C27 | 117.7 (10) | C16—O11—Gd1iv | 127.2 (4) |
| C24—C23—C22 | 124.9 (10) | C16—O12—Gd1i | 161.3 (4) |
| C27—C23—C22 | 117.4 (11) |
| H··· | ||||
| O5—H5A···O7v | 0.82 | 2.03 | 2.737 (7) | 145 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5 | 0.82 | 2.03 | 2.737 (7) | 145 |
Symmetry code: (i) .