Literature DB >> 21587384

catena-Poly[[(1,10-phenanthroline)copper(II)]-μ-oxalato].

Jun Wang, Yong Hou, Zhi-Li Fang.   

Abstract

In the title coordination polymer, [Cu(C(2)O(4))(C(12)H(8)N(2))](n), the Cu(II) atom is six-coordinated by four O atoms from two oxalate ligands and two N atoms from one 1,10-phenanthroline (phen) ligand in a distorted octa-hedral coordination geometry. The oxalate anions act as bis-bidentate ligands, bridging the Cu-phen units in zigzag chains extending parallel to [100]. Inter-chain C-H⋯O hydrogen bonding and π-π stacking inter-actions [centroid-centroid distance = 3.7439 (17) Å] assemble neighboring chains, forming a three-dimensional supra-molecular network.

Entities:  

Year:  2010        PMID: 21587384      PMCID: PMC2983185          DOI: 10.1107/S1600536810035440

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the topologies and potential applications as functional materials of metal coordination polymers, see: Benneli & Gatteschi (2002 ▶); Qin et al. (2005 ▶); Qiu et al. (2007 ▶).

Experimental

Crystal data

[Cu(C2O4)(C12H8N2)] M = 331.76 Orthorhombic, a = 9.1445 (8) Å b = 10.1443 (9) Å c = 13.3294 (11) Å V = 1236.50 (18) Å3 Z = 4 Mo Kα radiation μ = 1.78 mm−1 T = 298 K 0.42 × 0.35 × 0.29 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2008 ▶) T min = 0.544, T max = 0.612 6811 measured reflections 2618 independent reflections 2373 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.059 S = 1.04 2618 reflections 190 parameters 1 restraint H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.30 e Å−3 Absolute structure: Flack (1983 ▶), 1217 Friedel pairs Flack parameter: 0.019 (14) Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810035440/zl2304sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810035440/zl2304Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C2O4)(C12H8N2)]F(000) = 668
Mr = 331.76Dx = 1.782 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 2618 reflections
a = 9.1445 (8) Åθ = 2.5–27.0°
b = 10.1443 (9) ŵ = 1.78 mm1
c = 13.3294 (11) ÅT = 298 K
V = 1236.50 (18) Å3Block, blue
Z = 40.42 × 0.35 × 0.29 mm
Bruker APEXII CCD area-detector diffractometer2618 independent reflections
Radiation source: fine-focus sealed tube2373 reflections with I > 2σ(I)
graphiteRint = 0.021
φ and ω scanθmax = 27.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008)h = −8→11
Tmin = 0.544, Tmax = 0.612k = −10→12
6811 measured reflectionsl = −16→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.024H-atom parameters constrained
wR(F2) = 0.059w = 1/[σ2(Fo2) + (0.0289P)2] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
2618 reflectionsΔρmax = 0.28 e Å3
190 parametersΔρmin = −0.30 e Å3
1 restraintAbsolute structure: Flack (1983), 1217 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.019 (14)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.6938 (3)0.9764 (3)−0.04988 (19)0.0407 (6)
H10.66521.0617−0.06620.049*
Cu10.87241 (3)1.09675 (2)0.11815 (4)0.03062 (9)
N10.9474 (2)0.9310 (2)0.18929 (17)0.0352 (5)
O11.0814 (2)1.12990 (18)0.02682 (14)0.0377 (4)
C20.6422 (3)0.8724 (3)−0.1095 (2)0.0486 (7)
H20.58180.8883−0.16430.058*
N20.7802 (2)0.9598 (2)0.02762 (16)0.0325 (4)
O20.98329 (19)1.21773 (18)0.20589 (13)0.0377 (4)
C30.6829 (3)0.7475 (3)−0.0849 (2)0.0472 (7)
H30.65060.6770−0.12370.057*
O31.1635 (2)1.36277 (17)0.21108 (14)0.0358 (4)
C40.7727 (3)0.7242 (2)−0.0022 (2)0.0386 (6)
O41.2795 (2)1.25638 (18)0.04136 (14)0.0376 (4)
C50.8190 (3)0.8351 (2)0.05270 (19)0.0321 (5)
C60.9086 (2)0.8194 (2)0.13957 (17)0.0307 (6)
C70.9518 (3)0.6918 (3)0.1703 (2)0.0404 (6)
C80.9027 (3)0.5816 (2)0.1130 (4)0.0500 (7)
H80.92930.49710.13300.060*
C90.8186 (4)0.5967 (2)0.0306 (3)0.0485 (7)
H90.78990.5226−0.00550.058*
C101.0386 (3)0.6850 (3)0.2567 (2)0.0498 (7)
H101.07230.60380.27940.060*
C111.0740 (4)0.7970 (3)0.3077 (3)0.0555 (8)
H111.12950.79220.36600.067*
C121.0266 (3)0.9184 (3)0.2720 (2)0.0471 (7)
H121.05150.99400.30760.056*
C131.1578 (3)1.2130 (2)0.07154 (19)0.0303 (5)
C141.0979 (3)1.2700 (2)0.17167 (19)0.0288 (5)
U11U22U33U12U13U23
C10.0439 (15)0.0420 (14)0.0362 (14)0.0018 (12)−0.0088 (12)−0.0036 (12)
Cu10.03102 (14)0.02964 (14)0.03119 (13)−0.00071 (10)−0.00153 (13)−0.00414 (16)
N10.0315 (11)0.0393 (11)0.0347 (12)0.0005 (9)−0.0041 (9)−0.0007 (9)
O10.0370 (10)0.0409 (9)0.0350 (10)−0.0020 (8)0.0025 (8)−0.0107 (8)
C20.0555 (19)0.0558 (17)0.0346 (15)0.0010 (14)−0.0120 (13)−0.0089 (13)
N20.0336 (10)0.0323 (10)0.0317 (11)0.0008 (8)−0.0013 (9)−0.0039 (9)
O20.0365 (11)0.0433 (10)0.0335 (10)−0.0101 (8)0.0092 (8)−0.0118 (9)
C30.0500 (18)0.0539 (17)0.0376 (16)−0.0090 (14)−0.0026 (14)−0.0157 (13)
O30.0382 (10)0.0329 (9)0.0361 (10)−0.0043 (8)0.0007 (8)−0.0064 (8)
C40.0393 (14)0.0370 (13)0.0395 (15)−0.0068 (11)0.0064 (11)−0.0096 (12)
O40.0363 (10)0.0388 (9)0.0377 (10)−0.0026 (8)0.0102 (8)−0.0030 (8)
C50.0320 (13)0.0337 (13)0.0307 (13)−0.0018 (11)0.0058 (11)−0.0035 (10)
C60.0288 (12)0.0328 (12)0.0305 (16)0.0004 (9)0.0055 (9)−0.0016 (9)
C70.0375 (14)0.0414 (15)0.0424 (15)0.0040 (12)0.0059 (12)0.0067 (12)
C80.0599 (17)0.0306 (12)0.0593 (18)0.0031 (10)0.011 (2)0.0032 (18)
C90.0581 (18)0.0317 (15)0.056 (2)−0.0092 (12)0.0074 (16)−0.0072 (13)
C100.0491 (18)0.0495 (18)0.0509 (19)0.0092 (13)0.0012 (14)0.0111 (14)
C110.0519 (19)0.068 (2)0.0465 (19)0.0056 (17)−0.0099 (15)0.0107 (17)
C120.0499 (17)0.0496 (16)0.0417 (16)0.0011 (13)−0.0124 (13)−0.0052 (13)
C130.0327 (13)0.0285 (12)0.0296 (12)0.0062 (10)−0.0010 (11)0.0017 (10)
C140.0293 (12)0.0297 (12)0.0274 (12)0.0011 (10)−0.0030 (10)−0.0022 (11)
C1—N21.311 (3)O3—Cu1ii2.3135 (18)
C1—C21.403 (4)C4—C51.407 (3)
C1—H10.9300C4—C91.428 (4)
Cu1—O21.9753 (18)O4—C131.263 (3)
Cu1—O4i1.9973 (19)O4—Cu1ii1.9973 (19)
Cu1—N22.024 (2)C5—C61.428 (3)
Cu1—N12.049 (2)C6—C71.414 (3)
Cu1—O12.2909 (19)C7—C101.401 (4)
Cu1—O3i2.3135 (18)C7—C81.426 (5)
N1—C121.325 (4)C8—C91.350 (6)
N1—C61.359 (3)C8—H80.9300
O1—C131.247 (3)C9—H90.9300
C2—C31.360 (5)C10—C111.363 (4)
C2—H20.9300C10—H100.9300
N2—C51.356 (3)C11—C121.390 (4)
O2—C141.260 (3)C11—H110.9300
C3—C41.395 (4)C12—H120.9300
C3—H30.9300C13—C141.554 (3)
O3—C141.234 (3)
N2—C1—C2123.5 (2)C3—C4—C9124.7 (3)
N2—C1—H1118.3C5—C4—C9118.4 (3)
C2—C1—H1118.3C13—O4—Cu1ii118.13 (17)
O2—Cu1—O4i93.34 (8)N2—C5—C4122.6 (2)
O2—Cu1—N2173.31 (8)N2—C5—C6117.0 (2)
O4i—Cu1—N291.68 (9)C4—C5—C6120.4 (2)
O2—Cu1—N193.68 (8)N1—C6—C7123.3 (2)
O4i—Cu1—N1172.68 (8)N1—C6—C5116.9 (2)
N2—Cu1—N181.49 (9)C7—C6—C5119.8 (2)
O2—Cu1—O178.18 (7)C10—C7—C6116.2 (2)
O4i—Cu1—O188.46 (7)C10—C7—C8125.5 (3)
N2—Cu1—O197.55 (7)C6—C7—C8118.3 (3)
N1—Cu1—O195.01 (8)C9—C8—C7121.7 (3)
O2—Cu1—O3i89.80 (7)C9—C8—H8119.1
O4i—Cu1—O3i77.92 (7)C7—C8—H8119.1
N2—Cu1—O3i95.57 (7)C8—C9—C4121.3 (3)
N1—Cu1—O3i100.03 (8)C8—C9—H9119.3
O1—Cu1—O3i161.33 (6)C4—C9—H9119.3
C12—N1—C6117.9 (2)C11—C10—C7120.2 (3)
C12—N1—Cu1130.30 (19)C11—C10—H10119.9
C6—N1—Cu1111.77 (16)C7—C10—H10119.9
C13—O1—Cu1108.21 (16)C10—C11—C12119.6 (3)
C3—C2—C1118.2 (3)C10—C11—H11120.2
C3—C2—H2120.9C12—C11—H11120.2
C1—C2—H2120.9N1—C12—C11122.7 (3)
C1—N2—C5118.1 (2)N1—C12—H12118.6
C1—N2—Cu1129.22 (18)C11—C12—H12118.6
C5—N2—Cu1112.62 (16)O1—C13—O4125.2 (2)
C14—O2—Cu1118.30 (16)O1—C13—C14117.7 (2)
C2—C3—C4120.6 (3)O4—C13—C14117.1 (2)
C2—C3—H3119.7O3—C14—O2124.9 (2)
C4—C3—H3119.7O3—C14—C13118.5 (2)
C14—O3—Cu1ii108.00 (16)O2—C14—C13116.6 (2)
C3—C4—C5116.9 (2)
D—H···AD—HH···AD···AD—H···A
C11—H11···O4iii0.932.513.416 (4)166
C9—H9···O1iv0.932.493.160 (3)129
C2—H2···O2v0.932.523.136 (3)124
C1—H1···O4i0.932.563.072 (3)115
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C11—H11⋯O4i0.932.513.416 (4)166
C9—H9⋯O1ii0.932.493.160 (3)129
C2—H2⋯O2iii0.932.523.136 (3)124
C1—H1⋯O4iv0.932.563.072 (3)115

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  Magnetism of lanthanides in molecular materials with transition-metal ions and organic radicals.

Authors:  Cristiano Benelli; Dante Gatteschi
Journal:  Chem Rev       Date:  2002-06       Impact factor: 60.622

2.  A series of three-dimensional lanthanide coordination polymers with rutile and unprecedented rutile-related topologies.

Authors:  Chao Qin; Xin-Long Wang; En-Bo Wang; Zhong-Min Su
Journal:  Inorg Chem       Date:  2005-10-03       Impact factor: 5.165

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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