Literature DB >> 21586089

Characterization of 18 new microsatellite loci in Atlantic cod (Gadus morhua L.).

Sigurlaug Skirnisdottir1, Christophe Pampoulie, Sigurbjorg Hauksdottir, Inga Schulte, Kristinn Olafsson, Gudmundur O Hreggvidsson, Sigridur Hjorleifsdottir.   

Abstract

Eighteen new microsatellite loci consisting of 10 di-, 5 tri-, 2 tetra- and 1 heptanucleotide repeats are introduced for the Atlantic cod (Gadus morhua L.). All loci were co-amplified in two polymerase chain reactions (plus two previously published microsatellites) and all products were typed clearly. The number of alleles per locus ranged from six (PGmo130) to 45 (PGmo76) and the observed heterozygosity ranged from 0.356 (PGmo130) to 0.957 (PGmo95). All loci except one followed Hardy-Weinberg expectations. Genetic linkage disequilibrium analysis between all pairs of loci did not yield any significant values.
© 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd.

Entities:  

Year:  2008        PMID: 21586089     DOI: 10.1111/j.1755-0998.2008.02327.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  1 in total

1.  A novel method of microsatellite genotyping-by-sequencing using individual combinatorial barcoding.

Authors:  Salla Vartia; José L Villanueva-Cañas; John Finarelli; Edward D Farrell; Patrick C Collins; Graham M Hughes; Jeanette E L Carlsson; David T Gauthier; Philip McGinnity; Thomas F Cross; Richard D FitzGerald; Luca Mirimin; Fiona Crispie; Paul D Cotter; Jens Carlsson
Journal:  R Soc Open Sci       Date:  2016-01-20       Impact factor: 2.963

  1 in total

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