Literature DB >> 21584006

4-Amino-5-(2-hydroxy-benzyl-idene-amino)benzene-1,2-dicarbonitrile.

Yan Cheng1, Jing Gao.   

Abstract

A new tetra-dentate unsymmetrical Schiff base, C(15)H(10)N(4)O, has been synthesized from 4,5-dicyano-o-phenyl-enediamine and o-vanillin in refluxing ethanol. The dihedral angle between the two benzene rings is 39.0 (1)°. There are intra-molecular O-H⋯N and weak inter-molecular N-H⋯O and N-H⋯N inter-actions.

Entities:  

Year:  2009        PMID: 21584006      PMCID: PMC2977663          DOI: 10.1107/S160053680901157X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of Schiff bases, see: Boskovic et al. (2003 ▶); Koizumi et al. (2005 ▶); Oshiob et al. (2005 ▶). For related structures, see: Kannappan et al. (2005 ▶); Zhang et al. (2003 ▶).

Experimental

Crystal data

C15H10N4O M = 262.27 Monoclinic, a = 14.0158 (15) Å b = 12.3650 (13) Å c = 7.3557 (8) Å β = 99.904 (2)° V = 1255.8 (2) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 273 K 0.12 × 0.10 × 0.08 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.989, T max = 0.993 7234 measured reflections 2838 independent reflections 1770 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.170 S = 1.00 2838 reflections 187 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.16 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680901157X/fl2237sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680901157X/fl2237Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H10N4OF(000) = 544
Mr = 262.27Dx = 1.387 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1728 reflections
a = 14.0158 (15) Åθ = 2.2–26.3°
b = 12.3650 (13) ŵ = 0.09 mm1
c = 7.3557 (8) ÅT = 273 K
β = 99.904 (2)°Block, yellow
V = 1255.8 (2) Å30.12 × 0.10 × 0.08 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer2838 independent reflections
Radiation source: fine-focus sealed tube1770 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 27.5°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −18→15
Tmin = 0.989, Tmax = 0.993k = −16→11
7234 measured reflectionsl = −9→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.170H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.105P)2] where P = (Fo2 + 2Fc2)/3
2838 reflections(Δ/σ)max = 0.001
187 parametersΔρmax = 0.14 e Å3
2 restraintsΔρmin = −0.16 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.91817 (12)0.53191 (15)0.1796 (2)0.0451 (5)
H10.91430.46490.12130.054*
C20.75504 (12)0.55664 (15)0.0486 (2)0.0447 (5)
C30.72462 (12)0.45035 (16)0.0422 (3)0.0467 (5)
H30.76400.39820.10840.056*
C41.01931 (14)0.66149 (16)0.3888 (3)0.0495 (5)
C50.60770 (13)0.60523 (16)−0.1573 (3)0.0513 (5)
H50.56870.6568−0.22580.062*
C60.48595 (14)0.46643 (17)−0.2707 (3)0.0517 (5)
C71.00930 (12)0.56357 (15)0.2900 (2)0.0433 (5)
C80.57855 (12)0.49920 (16)−0.1632 (3)0.0478 (5)
C90.63646 (13)0.41989 (15)−0.0612 (3)0.0487 (5)
C100.69528 (13)0.63652 (15)−0.0496 (3)0.0491 (5)
C110.60376 (14)0.30994 (18)−0.0585 (3)0.0585 (6)
C121.09021 (14)0.49709 (18)0.2966 (3)0.0551 (5)
H121.08400.43150.23380.066*
C131.10904 (16)0.69001 (19)0.4891 (3)0.0629 (6)
H131.11600.75420.55590.075*
C141.18721 (16)0.6233 (2)0.4895 (3)0.0685 (7)
H141.24720.64370.55540.082*
C151.17898 (14)0.5268 (2)0.3944 (3)0.0671 (7)
H151.23270.48240.39620.080*
N10.57748 (15)0.22349 (18)−0.0536 (3)0.0888 (7)
N20.41430 (13)0.43718 (16)−0.3475 (3)0.0680 (6)
N30.72491 (14)0.74135 (15)−0.0435 (3)0.0700 (6)
N40.84233 (10)0.59191 (12)0.1583 (2)0.0462 (4)
O10.94357 (11)0.72904 (11)0.3901 (2)0.0692 (5)
H1A0.89500.70340.32680.104*
H1B0.6802 (13)0.7949 (13)−0.087 (3)0.080*
H1C0.7813 (10)0.7570 (18)0.039 (3)0.080*
U11U22U33U12U13U23
C10.0428 (10)0.0454 (10)0.0451 (10)−0.0030 (8)0.0018 (8)0.0023 (8)
C20.0359 (9)0.0493 (11)0.0464 (10)−0.0008 (8)0.0002 (8)−0.0008 (8)
C30.0373 (10)0.0505 (11)0.0491 (11)0.0030 (8)−0.0015 (8)0.0021 (8)
C40.0475 (11)0.0520 (11)0.0461 (11)−0.0053 (9)0.0000 (8)0.0062 (9)
C50.0389 (10)0.0566 (12)0.0540 (12)0.0045 (9)−0.0047 (8)0.0050 (9)
C60.0411 (11)0.0574 (12)0.0544 (12)0.0012 (9)0.0019 (9)−0.0047 (9)
C70.0367 (10)0.0496 (11)0.0412 (10)−0.0016 (8)−0.0003 (7)0.0078 (8)
C80.0355 (10)0.0589 (12)0.0464 (11)0.0001 (8)−0.0006 (8)−0.0024 (8)
C90.0391 (10)0.0527 (12)0.0522 (11)−0.0018 (8)0.0019 (8)−0.0026 (8)
C100.0408 (10)0.0495 (11)0.0539 (11)0.0007 (8)−0.0004 (8)0.0031 (9)
C110.0426 (11)0.0556 (13)0.0708 (15)−0.0043 (10)−0.0088 (10)−0.0018 (10)
C120.0479 (11)0.0643 (13)0.0514 (12)0.0038 (9)0.0036 (9)0.0068 (9)
C130.0586 (13)0.0691 (14)0.0556 (13)−0.0205 (11)−0.0052 (10)0.0022 (10)
C140.0441 (12)0.0998 (19)0.0557 (13)−0.0192 (12)−0.0083 (10)0.0163 (13)
C150.0405 (11)0.0969 (19)0.0615 (14)0.0076 (11)0.0022 (10)0.0150 (12)
N10.0665 (13)0.0643 (14)0.124 (2)−0.0132 (11)−0.0155 (12)0.0018 (12)
N20.0467 (10)0.0788 (14)0.0724 (13)−0.0042 (9)−0.0071 (9)−0.0107 (10)
N30.0556 (11)0.0517 (11)0.0917 (15)−0.0012 (9)−0.0185 (10)0.0126 (10)
N40.0375 (8)0.0481 (9)0.0490 (9)0.0002 (7)−0.0036 (7)0.0033 (7)
O10.0627 (10)0.0562 (9)0.0816 (11)0.0064 (7)−0.0076 (8)−0.0126 (8)
C1—N41.283 (2)C7—C121.395 (3)
C1—C71.445 (2)C8—C91.405 (3)
C1—H10.9300C9—C111.436 (3)
C2—C31.380 (3)C10—N31.360 (3)
C2—C101.411 (3)C11—N11.133 (3)
C2—N41.414 (2)C12—C151.376 (3)
C3—C91.387 (2)C12—H120.9300
C3—H30.9300C13—C141.371 (3)
C4—O11.352 (2)C13—H130.9300
C4—C131.390 (3)C14—C151.378 (3)
C4—C71.407 (3)C14—H140.9300
C5—C81.372 (3)C15—H150.9300
C5—C101.396 (3)N3—H1B0.930 (18)
C5—H50.9300N3—H1C0.930 (19)
C6—N21.124 (2)O1—H1A0.8200
C6—C81.456 (2)
N4—C1—C7123.06 (17)C3—C9—C11120.39 (17)
N4—C1—H1118.5C8—C9—C11120.79 (16)
C7—C1—H1118.5N3—C10—C5121.11 (18)
C3—C2—C10119.77 (16)N3—C10—C2119.97 (17)
C3—C2—N4123.04 (16)C5—C10—C2118.88 (17)
C10—C2—N4117.10 (16)N1—C11—C9178.9 (3)
C2—C3—C9121.21 (17)C15—C12—C7121.2 (2)
C2—C3—H3119.4C15—C12—H12119.4
C9—C3—H3119.4C7—C12—H12119.4
O1—C4—C13118.65 (19)C14—C13—C4119.9 (2)
O1—C4—C7121.79 (16)C14—C13—H13120.1
C13—C4—C7119.57 (19)C4—C13—H13120.1
C8—C5—C10120.72 (18)C13—C14—C15121.5 (2)
C8—C5—H5119.6C13—C14—H14119.2
C10—C5—H5119.6C15—C14—H14119.2
N2—C6—C8176.6 (2)C12—C15—C14119.1 (2)
C12—C7—C4118.76 (17)C12—C15—H15120.5
C12—C7—C1119.65 (18)C14—C15—H15120.5
C4—C7—C1121.57 (17)C10—N3—H1B118.9 (14)
C5—C8—C9120.58 (16)C10—N3—H1C116.1 (14)
C5—C8—C6121.05 (17)H1B—N3—H1C122 (2)
C9—C8—C6118.34 (17)C1—N4—C2120.57 (16)
C3—C9—C8118.78 (17)C4—O1—H1A109.5
D—H···AD—HH···AD···AD—H···A
N3—H1B···N2i0.93 (2)2.21 (2)3.126 (3)171 (2)
N3—H1C···O1ii0.93 (2)2.69 (2)3.206 (3)116 (2)
O1—H1A···N40.821.912.639 (2)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H1B⋯N2i0.930 (18)2.205 (17)3.126 (3)171 (2)
N3—H1C⋯O1ii0.930 (19)2.69 (2)3.206 (3)115.5 (17)
O1—H1A⋯N40.821.912.639 (2)147

Symmetry codes: (i) ; (ii) .

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