| Literature DB >> 21583996 |
Hristo Varbanov, Rossen Buyukliev, Adriana Bakalova, Alexander Roller.
Abstract
The title compound, 3-amino-5-methyl-5-(4-pyrid-yl)imid-azol-idine-2,4-dione, C(9)H(10)N(4)O(2), was obtained by reaction of 5-methyl-5-(4-pyrid-yl)hydantoin with hydrazine. It crystallizes as a racemate in the tetra-gonal space group I4(1)/a with one mol-ecule in the asymmetric unit. The dihedral angle between the pyridine ring and the five-membered hydantoin ring is 47.99 (3)° In the crystal structure, mol-ecules are joined in a three-dimensional hydrogen-bonded network by N-H⋯N and N-H⋯O links.Entities:
Year: 2009 PMID: 21583996 PMCID: PMC2977653 DOI: 10.1107/S1600536809011404
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H10N4O2 | |
| Mo | |
| Tetragonal, | Cell parameters from 847 reflections |
| Hall symbol: -I 4ad | θ = 2.9–29.5° |
| µ = 0.11 mm−1 | |
| Block, colourless | |
| 0.50 × 0.50 × 0.50 mm | |
| Bruker X8 APEXII CCD diffractometer | 2765 independent reflections |
| Radiation source: fine-focus sealed tube | 2179 reflections with |
| graphite | |
| ω scans | θmax = 30.1°, θmin = 2.9° |
| Absorption correction: multi-scan ( | |
| 51879 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2765 reflections | (Δ/σ)max < 0.001 |
| 144 parameters | Δρmax = 0.56 e Å−3 |
| 0 restraints | Δρmin = −0.44 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.59104 (8) | 0.59567 (7) | 0.06315 (4) | 0.0171 (2) | |
| O2 | 0.68145 (8) | 0.42948 (8) | 0.23252 (4) | 0.0203 (2) | |
| N1 | 0.58287 (9) | 0.06249 (9) | 0.13055 (5) | 0.0176 (2) | |
| N2 | 0.67304 (9) | 0.43740 (9) | 0.07949 (5) | 0.0150 (2) | |
| H2 | 0.6820 | 0.4172 | 0.0431 | 0.018* | |
| N3 | 0.62479 (8) | 0.53105 (8) | 0.15592 (5) | 0.0128 (2) | |
| N4 | 0.57993 (10) | 0.61113 (9) | 0.18907 (5) | 0.0181 (2) | |
| H4A | 0.5062 (15) | 0.6163 (15) | 0.1787 (8) | 0.027 (5)* | |
| H4B | 0.6100 (16) | 0.6781 (17) | 0.1806 (9) | 0.036 (5)* | |
| C1 | 0.70691 (10) | 0.37686 (10) | 0.12997 (5) | 0.0136 (3) | |
| C2 | 0.65758 (10) | 0.26869 (10) | 0.13127 (5) | 0.0131 (2) | |
| C3 | 0.63039 (11) | 0.21921 (10) | 0.07925 (6) | 0.0165 (3) | |
| H3 | 0.6365 | 0.2547 | 0.0430 | 0.020* | |
| C4 | 0.59419 (11) | 0.11717 (11) | 0.08121 (6) | 0.0178 (3) | |
| H4 | 0.5764 | 0.0843 | 0.0454 | 0.021* | |
| C5 | 0.60863 (11) | 0.11133 (11) | 0.18034 (6) | 0.0179 (3) | |
| H5 | 0.6008 | 0.0742 | 0.2160 | 0.021* | |
| C6 | 0.64606 (11) | 0.21278 (10) | 0.18292 (6) | 0.0165 (3) | |
| H6 | 0.6635 | 0.2435 | 0.2194 | 0.020* | |
| C7 | 0.82617 (11) | 0.36654 (11) | 0.13212 (7) | 0.0201 (3) | |
| H7A | 0.8578 | 0.4360 | 0.1312 | 0.030* | |
| H7B | 0.8502 | 0.3262 | 0.0984 | 0.030* | |
| H7C | 0.8466 | 0.3308 | 0.1682 | 0.030* | |
| C8 | 0.67014 (10) | 0.44623 (10) | 0.18059 (6) | 0.0139 (3) | |
| C9 | 0.62667 (10) | 0.52740 (10) | 0.09462 (5) | 0.0132 (3) |
| O1 | 0.0197 (5) | 0.0162 (5) | 0.0154 (5) | 0.0016 (4) | −0.0004 (3) | 0.0034 (3) |
| O2 | 0.0299 (6) | 0.0178 (5) | 0.0131 (5) | 0.0007 (4) | −0.0040 (4) | 0.0002 (4) |
| N1 | 0.0152 (5) | 0.0153 (5) | 0.0223 (6) | −0.0003 (4) | 0.0004 (4) | 0.0004 (4) |
| N2 | 0.0195 (5) | 0.0145 (5) | 0.0109 (5) | 0.0020 (4) | 0.0019 (4) | 0.0013 (4) |
| N3 | 0.0136 (5) | 0.0132 (5) | 0.0117 (5) | 0.0002 (4) | 0.0011 (4) | −0.0005 (4) |
| N4 | 0.0194 (6) | 0.0169 (6) | 0.0180 (6) | 0.0016 (4) | 0.0023 (4) | −0.0030 (4) |
| C1 | 0.0153 (6) | 0.0130 (6) | 0.0126 (6) | 0.0006 (4) | 0.0000 (4) | 0.0010 (4) |
| C2 | 0.0114 (5) | 0.0127 (6) | 0.0151 (6) | 0.0014 (4) | 0.0006 (4) | 0.0005 (4) |
| C3 | 0.0177 (6) | 0.0172 (6) | 0.0146 (6) | 0.0010 (5) | −0.0012 (5) | 0.0008 (5) |
| C4 | 0.0178 (6) | 0.0172 (6) | 0.0183 (6) | 0.0000 (5) | −0.0019 (5) | −0.0027 (5) |
| C5 | 0.0193 (6) | 0.0162 (6) | 0.0182 (6) | −0.0008 (5) | 0.0013 (5) | 0.0031 (5) |
| C6 | 0.0189 (6) | 0.0160 (6) | 0.0145 (6) | −0.0008 (5) | 0.0005 (5) | 0.0006 (5) |
| C7 | 0.0140 (6) | 0.0175 (6) | 0.0286 (7) | −0.0002 (5) | 0.0006 (5) | 0.0027 (5) |
| C8 | 0.0140 (6) | 0.0134 (6) | 0.0143 (6) | −0.0025 (4) | −0.0013 (4) | −0.0001 (4) |
| C9 | 0.0120 (6) | 0.0151 (6) | 0.0126 (6) | −0.0019 (5) | 0.0011 (4) | 0.0004 (4) |
| O1—C9 | 1.2229 (16) | C1—C8 | 1.5355 (18) |
| O2—C8 | 1.2174 (16) | C1—C7 | 1.5364 (19) |
| N1—C4 | 1.3378 (18) | C2—C6 | 1.3913 (18) |
| N1—C5 | 1.3425 (18) | C2—C3 | 1.3942 (18) |
| N2—C9 | 1.3442 (17) | C3—C4 | 1.3897 (19) |
| N2—C1 | 1.4589 (16) | C3—H3 | 0.9500 |
| N2—H2 | 0.8800 | C4—H4 | 0.9500 |
| N3—C8 | 1.3571 (17) | C5—C6 | 1.3884 (19) |
| N3—N4 | 1.4010 (16) | C5—H5 | 0.9500 |
| N3—C9 | 1.4047 (17) | C6—H6 | 0.9500 |
| N4—H4A | 0.978 (19) | C7—H7A | 0.9800 |
| N4—H4B | 0.96 (2) | C7—H7B | 0.9800 |
| C1—C2 | 1.5254 (18) | C7—H7C | 0.9800 |
| C4—N1—C5 | 116.49 (12) | N1—C4—C3 | 123.89 (13) |
| C9—N2—C1 | 112.63 (11) | N1—C4—H4 | 118.1 |
| C9—N2—H2 | 123.7 | C3—C4—H4 | 118.1 |
| C1—N2—H2 | 123.7 | N1—C5—C6 | 123.97 (13) |
| C8—N3—N4 | 122.57 (11) | N1—C5—H5 | 118.0 |
| C8—N3—C9 | 112.46 (10) | C6—C5—H5 | 118.0 |
| N4—N3—C9 | 124.96 (11) | C5—C6—C2 | 118.94 (12) |
| N3—N4—H4A | 108.4 (11) | C5—C6—H6 | 120.5 |
| N3—N4—H4B | 112.4 (12) | C2—C6—H6 | 120.5 |
| H4A—N4—H4B | 106.2 (17) | C1—C7—H7A | 109.5 |
| N2—C1—C2 | 112.09 (10) | C1—C7—H7B | 109.5 |
| N2—C1—C8 | 101.43 (10) | H7A—C7—H7B | 109.5 |
| C2—C1—C8 | 112.65 (10) | C1—C7—H7C | 109.5 |
| N2—C1—C7 | 111.58 (11) | H7A—C7—H7C | 109.5 |
| C2—C1—C7 | 109.52 (11) | H7B—C7—H7C | 109.5 |
| C8—C1—C7 | 109.37 (11) | O2—C8—N3 | 126.83 (12) |
| C6—C2—C3 | 117.73 (12) | O2—C8—C1 | 126.77 (12) |
| C6—C2—C1 | 121.97 (11) | N3—C8—C1 | 106.38 (11) |
| C3—C2—C1 | 120.09 (11) | O1—C9—N2 | 128.95 (12) |
| C4—C3—C2 | 119.00 (12) | O1—C9—N3 | 123.97 (12) |
| C4—C3—H3 | 120.5 | N2—C9—N3 | 107.08 (11) |
| C2—C3—H3 | 120.5 | ||
| C9—N2—C1—C2 | 121.59 (12) | N4—N3—C8—O2 | −2.7 (2) |
| C9—N2—C1—C8 | 1.19 (14) | C9—N3—C8—O2 | 178.47 (13) |
| C9—N2—C1—C7 | −115.16 (12) | N4—N3—C8—C1 | 178.74 (11) |
| N2—C1—C2—C6 | −155.89 (12) | C9—N3—C8—C1 | −0.11 (14) |
| C8—C1—C2—C6 | −42.24 (17) | N2—C1—C8—O2 | −179.19 (13) |
| C7—C1—C2—C6 | 79.71 (15) | C2—C1—C8—O2 | 60.81 (17) |
| N2—C1—C2—C3 | 29.50 (16) | C7—C1—C8—O2 | −61.23 (17) |
| C8—C1—C2—C3 | 143.15 (12) | N2—C1—C8—N3 | −0.61 (13) |
| C7—C1—C2—C3 | −94.90 (14) | C2—C1—C8—N3 | −120.62 (11) |
| C6—C2—C3—C4 | −0.49 (19) | C7—C1—C8—N3 | 117.35 (12) |
| C1—C2—C3—C4 | 174.35 (12) | C1—N2—C9—O1 | 179.01 (13) |
| C5—N1—C4—C3 | 0.0 (2) | C1—N2—C9—N3 | −1.30 (14) |
| C2—C3—C4—N1 | 0.4 (2) | C8—N3—C9—O1 | −179.43 (12) |
| C4—N1—C5—C6 | −0.4 (2) | N4—N3—C9—O1 | 1.8 (2) |
| N1—C5—C6—C2 | 0.4 (2) | C8—N3—C9—N2 | 0.86 (14) |
| C3—C2—C6—C5 | 0.1 (2) | N4—N3—C9—N2 | −177.95 (11) |
| C1—C2—C6—C5 | −174.61 (12) |
| H··· | ||||
| N2—H2···O2i | 0.88 | 2.26 | 2.9184 (15) | 131 |
| N2—H2···N4i | 0.88 | 2.69 | 3.526 | 159 |
| N4—H4A···O1ii | 0.977 (19) | 2.139 (19) | 3.0676 (16) | 158.07 |
| N4—H4B···O1iii | 0.96 (2) | 2.17 (2) | 3.1003 (16) | 162.23 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯N4i | 0.88 | 2.69 | 3.526 | 159 |
| N2—H2⋯O2i | 0.88 | 2.26 | 2.9184 (15) | 131 |
| N4—H4 | 0.977 (19) | 2.139 (19) | 3.0676 (16) | 158.07 |
| N4—H4 | 0.96 (2) | 2.17 (2) | 3.1003 (16) | 162.23 |
Symmetry codes: (i) ; (ii) ; (iii) .