Literature DB >> 21583942

Dimethyl 1-(3-cyano-benz-yl)-1H-pyrazole-3,5-dicarboxyl-ate.

Jie Xiao1, Ji-Yuan Yao, Hong Zhao.   

Abstract

In the mol-ecule of the title compound, C(15)H(13)N(3)O(4), the dihedral angle between the pyrazole and benzene ring planes is 67.7 (1)°. The crystal structure is stabilized by an intra-molecular C-H⋯O hydrogen bond and two weak inter-molecular C-H⋯O inter-actions.

Entities:  

Year:  2009        PMID: 21583942      PMCID: PMC2977805          DOI: 10.1107/S1600536809014895

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of pyrazoles, see: Lee et al. (1989 ▶); Chambers et al. (1985 ▶). For the importance of nitrile derivatives in the synthesis of some heterocyclic mol­ecules, see: Radl et al. (2000 ▶). For related structures, see: Fu & Zhao (2007 ▶); Xiao & Zhao (2008a ▶,b ▶,c ▶).

Experimental

Crystal data

C15H13N3O4 M = 299.28 Triclinic, a = 8.783 (3) Å b = 9.538 (4) Å c = 9.999 (4) Å α = 68.42 (3)° β = 71.79 (4)° γ = 82.13 (4)° V = 739.7 (5) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 292 K 0.40 × 0.30 × 0.20 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.968, T max = 0.979 7555 measured reflections 3338 independent reflections 2093 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.147 S = 1.05 3338 reflections 201 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.16 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL/PC (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL/PC; molecular graphics: SHELXTL/PC; software used to prepare material for publication: SHELXTL/PC. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809014895/bx2204sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809014895/bx2204Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H13N3O4Z = 2
Mr = 299.28F(000) = 312
Triclinic, P1Dx = 1.344 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.783 (3) ÅCell parameters from 1442 reflections
b = 9.538 (4) Åθ = 2.4–27.3°
c = 9.999 (4) ŵ = 0.10 mm1
α = 68.42 (3)°T = 292 K
β = 71.79 (4)°Block, colorless
γ = 82.13 (4)°0.40 × 0.30 × 0.20 mm
V = 739.7 (5) Å3
Rigaku SCXmini diffractometer3338 independent reflections
Radiation source: fine-focus sealed tube2093 reflections with I > 2σ(I)
graphiteRint = 0.031
Detector resolution: 13.6612 pixels mm-1θmax = 27.4°, θmin = 2.3°
ω scansh = −11→11
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −12→12
Tmin = 0.968, Tmax = 0.979l = −12→12
7555 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.147H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0636P)2 + 0.0696P] where P = (Fo2 + 2Fc2)/3
3338 reflections(Δ/σ)max < 0.001
201 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.16 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2466 (2)0.1608 (2)0.4437 (2)0.0473 (5)
C20.2324 (2)0.0151 (2)0.4487 (2)0.0485 (5)
H20.2544−0.07530.51850.058*
C30.1787 (2)0.0343 (2)0.3276 (2)0.0453 (5)
C40.2972 (2)0.2120 (3)0.5461 (2)0.0530 (5)
C50.1399 (2)−0.0794 (2)0.2763 (2)0.0516 (5)
C60.1126 (2)0.2702 (2)0.1210 (2)0.0513 (5)
H6A0.13880.21050.05610.062*
H6B0.17130.36300.06690.062*
C7−0.0655 (2)0.3076 (2)0.1568 (2)0.0441 (5)
C8−0.1362 (3)0.3905 (2)0.2511 (2)0.0548 (5)
H8−0.07350.42080.29480.066*
C9−0.2976 (3)0.4282 (3)0.2806 (3)0.0618 (6)
H9−0.34290.48180.34530.074*
C10−0.3928 (3)0.3868 (2)0.2143 (2)0.0564 (6)
H10−0.50120.41350.23270.068*
C11−0.3234 (2)0.3050 (2)0.1206 (2)0.0501 (5)
C12−0.1607 (2)0.2639 (2)0.0923 (2)0.0476 (5)
H12−0.11630.20740.03030.057*
C13−0.4218 (3)0.2621 (3)0.0498 (3)0.0625 (6)
C140.3840 (4)0.1361 (3)0.7627 (3)0.0947 (10)
H14A0.46850.20770.71280.142*
H14B0.41990.04700.83090.142*
H14C0.29220.17970.81740.142*
C150.1386 (3)−0.3432 (3)0.3310 (3)0.0756 (7)
H15A0.0277−0.33880.33430.113*
H15B0.1612−0.43580.40420.113*
H15C0.2046−0.33880.23290.113*
N10.2055 (2)0.26560 (19)0.32636 (19)0.0517 (4)
N20.16398 (19)0.18644 (18)0.25641 (17)0.0460 (4)
N3−0.4990 (3)0.2293 (3)−0.0067 (3)0.0878 (7)
O10.2979 (2)0.34090 (19)0.5354 (2)0.0816 (6)
O20.3407 (2)0.09684 (17)0.65206 (18)0.0724 (5)
O30.1723 (2)−0.21721 (16)0.36374 (17)0.0659 (5)
O40.0863 (2)−0.05489 (18)0.1728 (2)0.0769 (5)
U11U22U33U12U13U23
C10.0473 (12)0.0513 (12)0.0480 (12)−0.0011 (9)−0.0202 (9)−0.0170 (9)
C20.0510 (12)0.0492 (12)0.0461 (12)−0.0012 (9)−0.0194 (9)−0.0126 (9)
C30.0429 (11)0.0480 (11)0.0461 (11)−0.0024 (8)−0.0145 (9)−0.0153 (9)
C40.0528 (13)0.0599 (14)0.0562 (13)0.0044 (10)−0.0243 (10)−0.0258 (11)
C50.0471 (12)0.0576 (13)0.0532 (13)−0.0022 (9)−0.0164 (10)−0.0206 (10)
C60.0494 (12)0.0601 (13)0.0435 (12)−0.0053 (9)−0.0207 (9)−0.0094 (9)
C70.0505 (12)0.0415 (11)0.0400 (11)−0.0054 (8)−0.0182 (9)−0.0078 (8)
C80.0627 (14)0.0541 (13)0.0594 (13)−0.0035 (10)−0.0279 (11)−0.0232 (10)
C90.0677 (15)0.0597 (14)0.0658 (15)0.0024 (11)−0.0194 (12)−0.0314 (12)
C100.0512 (13)0.0570 (13)0.0634 (14)0.0023 (10)−0.0194 (11)−0.0219 (11)
C110.0499 (12)0.0522 (12)0.0526 (12)−0.0029 (9)−0.0233 (10)−0.0151 (9)
C120.0529 (12)0.0511 (12)0.0459 (11)−0.0005 (9)−0.0206 (9)−0.0195 (9)
C130.0509 (13)0.0758 (16)0.0698 (16)0.0021 (11)−0.0254 (12)−0.0295 (12)
C140.140 (3)0.098 (2)0.0809 (19)0.0188 (18)−0.075 (2)−0.0427 (16)
C150.097 (2)0.0552 (15)0.0804 (18)−0.0088 (13)−0.0245 (15)−0.0280 (13)
N10.0544 (10)0.0532 (10)0.0552 (11)−0.0020 (8)−0.0259 (8)−0.0185 (8)
N20.0464 (9)0.0503 (10)0.0446 (9)−0.0034 (7)−0.0205 (7)−0.0131 (7)
N30.0656 (14)0.124 (2)0.1012 (18)0.0028 (13)−0.0437 (13)−0.0557 (16)
O10.1237 (16)0.0589 (11)0.0919 (13)0.0097 (10)−0.0644 (12)−0.0358 (9)
O20.1047 (14)0.0650 (10)0.0687 (11)0.0110 (9)−0.0542 (10)−0.0268 (8)
O30.0894 (12)0.0511 (9)0.0636 (10)−0.0076 (8)−0.0321 (9)−0.0164 (7)
O40.1025 (14)0.0705 (11)0.0837 (12)0.0033 (9)−0.0579 (11)−0.0317 (9)
C1—N11.345 (2)C8—H80.9300
C1—C21.393 (3)C9—C101.387 (3)
C1—C41.482 (3)C9—H90.9300
C2—C31.375 (2)C10—C111.381 (3)
C2—H20.9300C10—H100.9300
C3—N21.369 (2)C11—C121.397 (3)
C3—C51.475 (3)C11—C131.452 (3)
C4—O11.195 (2)C12—H120.9300
C4—O21.325 (2)C13—N31.143 (3)
C5—O41.201 (2)C14—O21.455 (3)
C5—O31.334 (3)C14—H14A0.9600
C6—N21.471 (2)C14—H14B0.9600
C6—C71.514 (3)C14—H14C0.9600
C6—H6A0.9700C15—O31.444 (3)
C6—H6B0.9700C15—H15A0.9600
C7—C121.385 (2)C15—H15B0.9600
C7—C81.395 (3)C15—H15C0.9600
C8—C91.380 (3)N1—N21.347 (2)
N1—C1—C2111.68 (17)C10—C9—H9119.8
N1—C1—C4118.44 (18)C11—C10—C9118.7 (2)
C2—C1—C4129.88 (18)C11—C10—H10120.6
C3—C2—C1104.90 (17)C9—C10—H10120.6
C3—C2—H2127.6C10—C11—C12121.23 (18)
C1—C2—H2127.6C10—C11—C13119.1 (2)
N2—C3—C2107.05 (17)C12—C11—C13119.63 (19)
N2—C3—C5123.21 (17)C7—C12—C11119.83 (19)
C2—C3—C5129.74 (18)C7—C12—H12120.1
O1—C4—O2124.09 (19)C11—C12—H12120.1
O1—C4—C1124.3 (2)N3—C13—C11179.5 (3)
O2—C4—C1111.57 (19)O2—C14—H14A109.5
O4—C5—O3124.0 (2)O2—C14—H14B109.5
O4—C5—C3126.4 (2)H14A—C14—H14B109.5
O3—C5—C3109.59 (18)O2—C14—H14C109.5
N2—C6—C7112.47 (16)H14A—C14—H14C109.5
N2—C6—H6A109.1H14B—C14—H14C109.5
C7—C6—H6A109.1O3—C15—H15A109.5
N2—C6—H6B109.1O3—C15—H15B109.5
C7—C6—H6B109.1H15A—C15—H15B109.5
H6A—C6—H6B107.8O3—C15—H15C109.5
C12—C7—C8118.64 (19)H15A—C15—H15C109.5
C12—C7—C6120.28 (18)H15B—C15—H15C109.5
C8—C7—C6121.05 (17)C1—N1—N2104.90 (16)
C9—C8—C7121.12 (19)N1—N2—C3111.47 (15)
C9—C8—H8119.4N1—N2—C6118.28 (16)
C7—C8—H8119.4C3—N2—C6130.24 (16)
C8—C9—C10120.4 (2)C4—O2—C14115.33 (19)
C8—C9—H9119.8C5—O3—C15117.10 (18)
N1—C1—C2—C3−0.4 (2)C9—C10—C11—C13−179.5 (2)
C4—C1—C2—C3179.1 (2)C8—C7—C12—C110.9 (3)
C1—C2—C3—N20.3 (2)C6—C7—C12—C11−177.04 (18)
C1—C2—C3—C5−179.23 (19)C10—C11—C12—C7−1.1 (3)
N1—C1—C4—O13.2 (3)C13—C11—C12—C7178.51 (18)
C2—C1—C4—O1−176.3 (2)C2—C1—N1—N20.3 (2)
N1—C1—C4—O2−177.21 (18)C4—C1—N1—N2−179.24 (16)
C2—C1—C4—O23.3 (3)C1—N1—N2—C3−0.1 (2)
N2—C3—C5—O4−3.1 (3)C1—N1—N2—C6−179.84 (16)
C2—C3—C5—O4176.4 (2)C2—C3—N2—N1−0.1 (2)
N2—C3—C5—O3177.39 (18)C5—C3—N2—N1179.45 (17)
C2—C3—C5—O3−3.1 (3)C2—C3—N2—C6179.55 (18)
N2—C6—C7—C12−124.57 (19)C5—C3—N2—C6−0.9 (3)
N2—C6—C7—C857.5 (2)C7—C6—N2—N1−87.7 (2)
C12—C7—C8—C90.2 (3)C7—C6—N2—C392.6 (2)
C6—C7—C8—C9178.21 (19)O1—C4—O2—C142.8 (4)
C7—C8—C9—C10−1.3 (3)C1—C4—O2—C14−176.8 (2)
C8—C9—C10—C111.1 (3)O4—C5—O3—C15−0.6 (3)
C9—C10—C11—C120.1 (3)C3—C5—O3—C15178.93 (18)
D—H···AD—HH···AD···AD—H···A
C15—H15B···O1i0.962.433.363 (3)163
C9—H9···O1ii0.932.533.348 (3)147
C6—H6A···O40.972.412.979 (3)117
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H15B⋯O1i0.962.433.363 (3)163
C9—H9⋯O1ii0.932.533.348 (3)147
C6—H6A⋯O40.972.412.979 (3)117

Symmetry codes: (i) ; (ii) .

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