| Literature DB >> 21583929 |
Yu-Xiang Chen1, Zhen-Dong Zhao, Yan Gu, Yu-Min Wang.
Abstract
The title compound, pimaric acid, C(20)H(30)O(2), was isolated from a mixture of resin acids. There are three rings in the structure. The two cyclo-hexane rings have classical chair conformations with trans-fused ring junctions. The cyclo-hexene ring appears as a semi-chair.Entities:
Year: 2009 PMID: 21583929 PMCID: PMC2977793 DOI: 10.1107/S1600536809013233
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H30O2 | |
| Melting point: 490K K | |
| Orthorhombic, | Mo |
| Cell parameters from 25 reflections | |
| θ = 9–12° | |
| µ = 0.07 mm−1 | |
| Rectangular plate, colorless | |
| 0.30 × 0.20 × 0.10 mm |
| Enraf–Nonius CAD-4 diffractometer | 1231 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.3°, θmin = 2.0° |
| ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 1862 measured reflections | 3 standard reflections every 200 reflections |
| 1862 independent reflections | intensity decay: 1% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1862 reflections | (Δ/σ)max < 0.001 |
| 193 parameters | Δρmax = 0.16 e Å−3 |
| 0 restraints | Δρmin = −0.17 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.99697 (17) | 0.6536 (3) | 0.9540 (7) | 0.1009 (15) | |
| O2 | 0.91875 (17) | 0.5243 (3) | 0.9640 (8) | 0.1170 (19) | |
| H2B | 0.9493 | 0.4772 | 0.9603 | 0.176* | |
| C1 | 0.5623 (5) | 0.9204 (9) | 0.5670 (15) | 0.149 (4) | |
| H1A | 0.5421 | 0.9085 | 0.6725 | 0.179* | |
| H1B | 0.5589 | 0.9950 | 0.5113 | 0.179* | |
| C2 | 0.5940 (4) | 0.8361 (8) | 0.5000 (12) | 0.119 (3) | |
| H2A | 0.6125 | 0.8558 | 0.3947 | 0.143* | |
| C3 | 0.5645 (3) | 0.6180 (8) | 0.4461 (11) | 0.124 (3) | |
| H3A | 0.5725 | 0.6340 | 0.3264 | 0.186* | |
| H3B | 0.5200 | 0.6321 | 0.4713 | 0.186* | |
| H3C | 0.5752 | 0.5350 | 0.4715 | 0.186* | |
| C4 | 0.6077 (3) | 0.7061 (6) | 0.5606 (8) | 0.0801 (17) | |
| C5 | 0.6758 (2) | 0.6766 (5) | 0.5262 (7) | 0.0711 (14) | |
| H5A | 0.6874 | 0.6647 | 0.4118 | 0.085* | |
| C6 | 0.7215 (2) | 0.6657 (4) | 0.6420 (6) | 0.0521 (11) | |
| C7 | 0.7116 (2) | 0.6929 (4) | 0.8315 (6) | 0.0498 (11) | |
| H7A | 0.7139 | 0.6144 | 0.8911 | 0.060* | |
| C8 | 0.6445 (2) | 0.7431 (5) | 0.8672 (7) | 0.0680 (14) | |
| H8A | 0.6339 | 0.7301 | 0.9874 | 0.082* | |
| H8B | 0.6442 | 0.8300 | 0.8458 | 0.082* | |
| C9 | 0.5940 (2) | 0.6822 (6) | 0.7544 (8) | 0.0787 (16) | |
| H9A | 0.5518 | 0.7136 | 0.7837 | 0.094* | |
| H9B | 0.5940 | 0.5952 | 0.7760 | 0.094* | |
| C10 | 0.7870 (2) | 0.6163 (5) | 0.5973 (6) | 0.0640 (13) | |
| H10A | 0.7920 | 0.6179 | 0.4731 | 0.077* | |
| H10B | 0.7892 | 0.5320 | 0.6338 | 0.077* | |
| C11 | 0.8424 (2) | 0.6850 (5) | 0.6776 (6) | 0.0577 (12) | |
| H11A | 0.8465 | 0.7645 | 0.6245 | 0.069* | |
| H11B | 0.8822 | 0.6409 | 0.6592 | 0.069* | |
| C12 | 0.82995 (19) | 0.6994 (4) | 0.8726 (5) | 0.0445 (10) | |
| H12A | 0.8203 | 0.6169 | 0.9128 | 0.053* | |
| C13 | 0.7675 (2) | 0.7720 (4) | 0.9057 (5) | 0.0484 (11) | |
| C14 | 0.8910 (2) | 0.7370 (4) | 0.9743 (6) | 0.0532 (12) | |
| C15 | 0.8742 (3) | 0.7497 (5) | 1.1667 (7) | 0.0662 (14) | |
| H15A | 0.8647 | 0.6699 | 1.2137 | 0.079* | |
| H15B | 0.9110 | 0.7821 | 1.2280 | 0.079* | |
| C16 | 0.8169 (3) | 0.8327 (5) | 1.1954 (7) | 0.0697 (14) | |
| H16A | 0.8081 | 0.8385 | 1.3178 | 0.084* | |
| H16B | 0.8270 | 0.9137 | 1.1535 | 0.084* | |
| C17 | 0.7580 (2) | 0.7849 (5) | 1.1030 (5) | 0.0562 (13) | |
| H17A | 0.7224 | 0.8396 | 1.1244 | 0.067* | |
| H17B | 0.7469 | 0.7061 | 1.1505 | 0.067* | |
| C18 | 0.7663 (2) | 0.8972 (4) | 0.8218 (7) | 0.0620 (13) | |
| H18A | 0.8006 | 0.9458 | 0.8672 | 0.093* | |
| H18B | 0.7260 | 0.9360 | 0.8456 | 0.093* | |
| H18C | 0.7715 | 0.8887 | 0.6995 | 0.093* | |
| C19 | 0.9237 (2) | 0.8539 (5) | 0.9099 (8) | 0.0758 (16) | |
| H19A | 0.9608 | 0.8706 | 0.9794 | 0.114* | |
| H19B | 0.8941 | 0.9206 | 0.9181 | 0.114* | |
| H19C | 0.9366 | 0.8435 | 0.7922 | 0.114* | |
| C20 | 0.9393 (2) | 0.6334 (4) | 0.9643 (7) | 0.062 |
| O1 | 0.0487 (19) | 0.069 (2) | 0.185 (4) | 0.0073 (17) | −0.008 (3) | −0.014 (3) |
| O2 | 0.065 (2) | 0.063 (2) | 0.223 (6) | 0.0112 (18) | −0.001 (3) | 0.030 (3) |
| C1 | 0.150 (8) | 0.132 (7) | 0.166 (10) | 0.000 (6) | −0.001 (8) | 0.027 (7) |
| C2 | 0.098 (5) | 0.129 (7) | 0.130 (7) | 0.024 (5) | −0.018 (5) | 0.027 (6) |
| C3 | 0.090 (5) | 0.158 (7) | 0.124 (6) | −0.019 (5) | −0.015 (5) | −0.021 (6) |
| C4 | 0.056 (3) | 0.104 (5) | 0.080 (4) | 0.003 (3) | −0.012 (3) | −0.004 (4) |
| C5 | 0.065 (3) | 0.086 (4) | 0.062 (3) | 0.001 (3) | 0.007 (3) | −0.009 (3) |
| C6 | 0.056 (3) | 0.049 (2) | 0.051 (3) | 0.000 (2) | 0.004 (2) | −0.009 (2) |
| C7 | 0.050 (3) | 0.052 (3) | 0.048 (2) | 0.007 (2) | 0.010 (2) | 0.007 (2) |
| C8 | 0.049 (3) | 0.088 (3) | 0.067 (3) | 0.012 (3) | 0.004 (3) | −0.003 (3) |
| C9 | 0.053 (3) | 0.084 (4) | 0.100 (4) | 0.003 (3) | 0.004 (3) | 0.008 (4) |
| C10 | 0.064 (3) | 0.076 (3) | 0.052 (3) | 0.008 (3) | 0.008 (2) | −0.013 (3) |
| C11 | 0.051 (3) | 0.069 (3) | 0.053 (3) | 0.010 (2) | 0.014 (2) | −0.002 (3) |
| C12 | 0.049 (2) | 0.042 (2) | 0.042 (2) | 0.0070 (19) | 0.007 (2) | 0.005 (2) |
| C13 | 0.055 (2) | 0.050 (2) | 0.041 (2) | 0.013 (2) | 0.004 (2) | 0.001 (2) |
| C14 | 0.052 (2) | 0.045 (2) | 0.063 (3) | 0.002 (2) | −0.004 (2) | 0.006 (2) |
| C15 | 0.071 (3) | 0.070 (3) | 0.057 (3) | 0.016 (3) | −0.011 (3) | 0.000 (3) |
| C16 | 0.089 (4) | 0.069 (3) | 0.052 (3) | 0.017 (3) | −0.009 (3) | −0.008 (3) |
| C17 | 0.068 (3) | 0.059 (3) | 0.042 (3) | 0.016 (2) | 0.001 (2) | −0.004 (2) |
| C18 | 0.073 (3) | 0.051 (3) | 0.062 (3) | 0.010 (2) | −0.006 (3) | 0.007 (2) |
| C19 | 0.070 (3) | 0.065 (3) | 0.093 (4) | −0.013 (3) | −0.021 (3) | 0.011 (3) |
| C20 | 0.068 | 0.053 | 0.064 | −0.002 | −0.007 | 0.008 |
| O1—C20 | 1.223 (6) | C10—H10A | 0.9700 |
| O2—C20 | 1.273 (6) | C10—H10B | 0.9700 |
| O2—H2B | 0.8200 | C11—C12 | 1.544 (6) |
| C1—C2 | 1.251 (11) | C11—H11A | 0.9700 |
| C1—H1A | 0.9300 | C11—H11B | 0.9700 |
| C1—H1B | 0.9300 | C12—C13 | 1.546 (6) |
| C2—C4 | 1.531 (10) | C12—C14 | 1.552 (6) |
| C2—H2A | 0.9300 | C12—H12A | 0.9800 |
| C3—C4 | 1.592 (9) | C13—C18 | 1.523 (6) |
| C3—H3A | 0.9600 | C13—C17 | 1.551 (6) |
| C3—H3B | 0.9600 | C14—C20 | 1.520 (6) |
| C3—H3C | 0.9600 | C14—C19 | 1.538 (6) |
| C4—C5 | 1.479 (7) | C14—C15 | 1.541 (7) |
| C4—C9 | 1.554 (8) | C15—C16 | 1.517 (7) |
| C5—C6 | 1.315 (6) | C15—H15A | 0.9700 |
| C5—H5A | 0.9300 | C15—H15B | 0.9700 |
| C6—C10 | 1.507 (6) | C16—C17 | 1.515 (7) |
| C6—C7 | 1.516 (6) | C16—H16A | 0.9700 |
| C7—C8 | 1.527 (6) | C16—H16B | 0.9700 |
| C7—C13 | 1.563 (6) | C17—H17A | 0.9700 |
| C7—H7A | 0.9800 | C17—H17B | 0.9700 |
| C8—C9 | 1.524 (7) | C18—H18A | 0.9600 |
| C8—H8A | 0.9700 | C18—H18B | 0.9600 |
| C8—H8B | 0.9700 | C18—H18C | 0.9600 |
| C9—H9A | 0.9700 | C19—H19A | 0.9600 |
| C9—H9B | 0.9700 | C19—H19B | 0.9600 |
| C10—C11 | 1.514 (7) | C19—H19C | 0.9600 |
| C20—O2—H2B | 109.5 | C12—C11—H11B | 109.9 |
| C2—C1—H1A | 120.0 | H11A—C11—H11B | 108.3 |
| C2—C1—H1B | 120.0 | C11—C12—C13 | 110.9 (3) |
| H1A—C1—H1B | 120.0 | C11—C12—C14 | 112.8 (4) |
| C1—C2—C4 | 131.5 (10) | C13—C12—C14 | 117.8 (3) |
| C1—C2—H2A | 114.3 | C11—C12—H12A | 104.6 |
| C4—C2—H2A | 114.3 | C13—C12—H12A | 104.6 |
| C4—C3—H3A | 109.5 | C14—C12—H12A | 104.6 |
| C4—C3—H3B | 109.5 | C18—C13—C12 | 114.1 (4) |
| H3A—C3—H3B | 109.5 | C18—C13—C17 | 109.7 (4) |
| C4—C3—H3C | 109.5 | C12—C13—C17 | 108.6 (4) |
| H3A—C3—H3C | 109.5 | C18—C13—C7 | 109.4 (4) |
| H3B—C3—H3C | 109.5 | C12—C13—C7 | 106.2 (3) |
| C5—C4—C2 | 109.1 (6) | C17—C13—C7 | 108.7 (4) |
| C5—C4—C9 | 108.3 (5) | C20—C14—C19 | 108.4 (4) |
| C2—C4—C9 | 114.9 (6) | C20—C14—C15 | 105.6 (4) |
| C5—C4—C3 | 107.9 (5) | C19—C14—C15 | 109.9 (4) |
| C2—C4—C3 | 106.9 (6) | C20—C14—C12 | 108.5 (4) |
| C9—C4—C3 | 109.5 (6) | C19—C14—C12 | 114.8 (4) |
| C6—C5—C4 | 126.2 (5) | C15—C14—C12 | 109.3 (4) |
| C6—C5—H5A | 116.9 | C16—C15—C14 | 112.1 (4) |
| C4—C5—H5A | 116.9 | C16—C15—H15A | 109.2 |
| C5—C6—C10 | 122.0 (4) | C14—C15—H15A | 109.2 |
| C5—C6—C7 | 123.1 (4) | C16—C15—H15B | 109.2 |
| C10—C6—C7 | 114.7 (4) | C14—C15—H15B | 109.2 |
| C6—C7—C8 | 111.8 (4) | H15A—C15—H15B | 107.9 |
| C6—C7—C13 | 111.4 (4) | C17—C16—C15 | 111.0 (4) |
| C8—C7—C13 | 114.4 (4) | C17—C16—H16A | 109.4 |
| C6—C7—H7A | 106.2 | C15—C16—H16A | 109.4 |
| C8—C7—H7A | 106.2 | C17—C16—H16B | 109.4 |
| C13—C7—H7A | 106.2 | C15—C16—H16B | 109.4 |
| C9—C8—C7 | 111.6 (4) | H16A—C16—H16B | 108.0 |
| C9—C8—H8A | 109.3 | C16—C17—C13 | 113.4 (4) |
| C7—C8—H8A | 109.3 | C16—C17—H17A | 108.9 |
| C9—C8—H8B | 109.3 | C13—C17—H17A | 108.9 |
| C7—C8—H8B | 109.3 | C16—C17—H17B | 108.9 |
| H8A—C8—H8B | 108.0 | C13—C17—H17B | 108.9 |
| C8—C9—C4 | 110.8 (5) | H17A—C17—H17B | 107.7 |
| C8—C9—H9A | 109.5 | C13—C18—H18A | 109.5 |
| C4—C9—H9A | 109.5 | C13—C18—H18B | 109.5 |
| C8—C9—H9B | 109.5 | H18A—C18—H18B | 109.5 |
| C4—C9—H9B | 109.5 | C13—C18—H18C | 109.5 |
| H9A—C9—H9B | 108.1 | H18A—C18—H18C | 109.5 |
| C6—C10—C11 | 114.5 (4) | H18B—C18—H18C | 109.5 |
| C6—C10—H10A | 108.6 | C14—C19—H19A | 109.5 |
| C11—C10—H10A | 108.6 | C14—C19—H19B | 109.5 |
| C6—C10—H10B | 108.6 | H19A—C19—H19B | 109.5 |
| C11—C10—H10B | 108.6 | C14—C19—H19C | 109.5 |
| H10A—C10—H10B | 107.6 | H19A—C19—H19C | 109.5 |
| C10—C11—C12 | 109.1 (4) | H19B—C19—H19C | 109.5 |
| C10—C11—H11A | 109.9 | O1—C20—O2 | 120.0 (5) |
| C12—C11—H11A | 109.9 | O1—C20—C14 | 121.1 (4) |
| C10—C11—H11B | 109.9 | O2—C20—C14 | 118.8 (4) |
| C1—C2—C4—C5 | −138.0 (10) | C14—C12—C13—C7 | −163.7 (4) |
| C1—C2—C4—C9 | −16.1 (13) | C6—C7—C13—C18 | 66.0 (5) |
| C1—C2—C4—C3 | 105.6 (12) | C8—C7—C13—C18 | −62.1 (5) |
| C2—C4—C5—C6 | 108.1 (7) | C6—C7—C13—C12 | −57.6 (4) |
| C9—C4—C5—C6 | −17.6 (9) | C8—C7—C13—C12 | 174.3 (4) |
| C3—C4—C5—C6 | −136.1 (6) | C6—C7—C13—C17 | −174.2 (4) |
| C4—C5—C6—C10 | 170.2 (5) | C8—C7—C13—C17 | 57.7 (5) |
| C4—C5—C6—C7 | −5.4 (9) | C11—C12—C14—C20 | −65.6 (5) |
| C5—C6—C7—C8 | −4.4 (7) | C13—C12—C14—C20 | 163.0 (4) |
| C10—C6—C7—C8 | 179.7 (4) | C11—C12—C14—C19 | 55.8 (5) |
| C5—C6—C7—C13 | −133.9 (5) | C13—C12—C14—C19 | −75.5 (5) |
| C10—C6—C7—C13 | 50.2 (5) | C11—C12—C14—C15 | 179.8 (4) |
| C6—C7—C8—C9 | 37.2 (6) | C13—C12—C14—C15 | 48.4 (5) |
| C13—C7—C8—C9 | 165.1 (4) | C20—C14—C15—C16 | −168.9 (4) |
| C7—C8—C9—C4 | −61.6 (6) | C19—C14—C15—C16 | 74.3 (5) |
| C5—C4—C9—C8 | 49.7 (7) | C12—C14—C15—C16 | −52.4 (6) |
| C2—C4—C9—C8 | −72.5 (6) | C14—C15—C16—C17 | 59.3 (6) |
| C3—C4—C9—C8 | 167.2 (5) | C15—C16—C17—C13 | −58.9 (6) |
| C5—C6—C10—C11 | 137.5 (5) | C18—C13—C17—C16 | −74.5 (5) |
| C7—C6—C10—C11 | −46.6 (6) | C12—C13—C17—C16 | 50.8 (5) |
| C6—C10—C11—C12 | 50.2 (6) | C7—C13—C17—C16 | 165.9 (4) |
| C10—C11—C12—C13 | −60.7 (5) | C19—C14—C20—O1 | 18.5 (7) |
| C10—C11—C12—C14 | 164.6 (4) | C15—C14—C20—O1 | −99.2 (6) |
| C11—C12—C13—C18 | −56.5 (5) | C12—C14—C20—O1 | 143.8 (5) |
| C14—C12—C13—C18 | 75.7 (5) | C19—C14—C20—O2 | −160.4 (5) |
| C11—C12—C13—C17 | −179.2 (4) | C15—C14—C20—O2 | 81.9 (6) |
| C14—C12—C13—C17 | −47.0 (5) | C12—C14—C20—O2 | −35.2 (7) |
| C11—C12—C13—C7 | 64.1 (4) |