Literature DB >> 21583916

3β,12β,14α-Trihydroxy-pregnan-20-one.

Hefang Shi1, Yingxia Li.   

Abstract

The title compound, C(21)H(34)O(4), is a steriod of the pregnane family prepared by the sequential oxidation and reduction of 3β,12β-diacet-oxy-20-ethyl-enedioxy-pregnan-14-ene. The con-formations of the six-membered rings are close to chair forms, while the five-membered ring adopts an envelope conformation. All the rings are trans-fused and an intra-molecular O-H⋯O hydrogen bond occurs. In the crystal structure, inter-molecular O-H⋯O hydrogen bonds link the mol-ecules into a two-dimensional network.

Entities:  

Year:  2009        PMID: 21583916      PMCID: PMC2977780          DOI: 10.1107/S1600536809013853

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Templeton & Yan (1992 ▶); Fell & Heathcock (2002 ▶). For background on hecogenin, see: Ranu & Samanta (2003 ▶).

Experimental

Crystal data

C21H34O4 M = 350.48 Monoclinic, a = 6.1364 (7) Å b = 12.1472 (13) Å c = 12.7593 (14) Å β = 101.513 (2)° V = 931.94 (18) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.50 × 0.44 × 0.32 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.729, T max = 0.97 5569 measured reflections 2194 independent reflections 1930 reflections with I > 2σ(I) R int = 0.107

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.125 S = 1.01 2194 reflections 238 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.24 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809013853/hb2940sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809013853/hb2940Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H34O4F(000) = 384
Mr = 350.48Dx = 1.249 Mg m3
Monoclinic, P21Melting point: 431(2) K
Hall symbol: P 2ybMo Kα radiation, λ = 0.71073 Å
a = 6.1364 (7) ÅCell parameters from 2719 reflections
b = 12.1472 (13) Åθ = 4.7–55.9°
c = 12.7593 (14) ŵ = 0.08 mm1
β = 101.513 (2)°T = 293 K
V = 931.94 (18) Å3Prism, colourless
Z = 20.50 × 0.44 × 0.32 mm
Bruker SMART CCD area-detector diffractometer2194 independent reflections
Radiation source: fine-focus sealed tube1930 reflections with I > 2σ(I)
graphiteRint = 0.107
ω scansθmax = 27.5°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 1998)h = −7→7
Tmin = 0.729, Tmax = 0.97k = −15→13
5569 measured reflectionsl = −16→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.125H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.0733P)2] where P = (Fo2 + 2Fc2)/3
2194 reflections(Δ/σ)max < 0.001
238 parametersΔρmax = 0.28 e Å3
1 restraintΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.2262 (4)−0.0588 (2)−0.28839 (15)0.0605 (6)
H10.152 (7)−0.121 (5)−0.292 (3)0.091*
O20.9924 (3)0.22625 (16)0.32210 (14)0.0440 (4)
H21.062 (6)0.223 (4)0.382 (3)0.066*
O30.7898 (3)−0.09548 (15)0.33306 (15)0.0455 (5)
H30.767 (6)−0.146 (4)0.371 (3)0.068*
O41.1201 (4)0.2028 (2)0.54187 (16)0.0695 (7)
C10.5918 (4)0.0590 (2)−0.04305 (19)0.0439 (6)
H1A0.66050.1311−0.03170.053*
H1B0.70990.0046−0.03160.053*
C20.4657 (5)0.0512 (3)−0.1588 (2)0.0503 (6)
H2A0.35930.1111−0.17350.060*
H2B0.56950.0587−0.20660.060*
C30.3446 (5)−0.0573 (2)−0.18001 (19)0.0476 (6)
H3A0.4549−0.1166−0.17040.057*
C40.1926 (4)−0.0747 (2)−0.1019 (2)0.0457 (6)
H4A0.1198−0.1456−0.11500.055*
H4B0.0785−0.0182−0.11240.055*
C50.3237 (4)−0.07015 (19)0.01358 (19)0.0384 (5)
H50.4398−0.12650.01940.046*
C60.1835 (5)−0.1005 (2)0.0945 (2)0.0479 (6)
H6A0.1104−0.17040.07480.057*
H6B0.0693−0.04510.09370.057*
C70.3245 (5)−0.1090 (2)0.2067 (2)0.0470 (6)
H7A0.4239−0.17150.21000.056*
H7B0.2283−0.12160.25730.056*
C80.4612 (4)−0.0048 (2)0.23833 (18)0.0355 (5)
H80.35770.05510.24490.043*
C90.5946 (4)0.02912 (18)0.15366 (17)0.0317 (5)
H90.6985−0.03120.14920.038*
C100.4450 (4)0.04102 (19)0.04009 (18)0.0345 (5)
C110.7364 (4)0.1310 (2)0.19024 (19)0.0359 (5)
H11A0.83190.14470.13960.043*
H11B0.63850.19390.18830.043*
C120.8806 (4)0.12266 (18)0.30152 (19)0.0348 (5)
H120.99220.06510.30100.042*
C130.7415 (4)0.09215 (19)0.38462 (19)0.0348 (5)
C140.6210 (4)−0.01731 (19)0.34639 (18)0.0361 (5)
C150.5234 (5)−0.0524 (2)0.44230 (19)0.0473 (6)
H15A0.5004−0.13140.44230.057*
H15B0.3827−0.01580.44170.057*
C160.6988 (5)−0.0170 (3)0.5398 (2)0.0541 (7)
H16A0.7707−0.08100.57690.065*
H16B0.62970.02490.58920.065*
C170.8697 (4)0.0546 (2)0.49776 (19)0.0403 (5)
H170.98850.00510.48580.048*
C180.5805 (4)0.1853 (2)0.3979 (2)0.0424 (6)
H18A0.66350.25060.42240.064*
H18B0.49340.16380.44920.064*
H18C0.48370.19980.33040.064*
C190.2822 (4)0.1371 (2)0.0358 (2)0.0448 (6)
H19A0.36060.20530.03470.067*
H19B0.21530.13500.09770.067*
H19C0.16850.1313−0.02760.067*
C200.9805 (4)0.1466 (2)0.5690 (2)0.0438 (6)
C210.9195 (6)0.1652 (3)0.6749 (2)0.0545 (7)
H21A1.01510.22050.71350.082*
H21B0.93640.09780.71500.082*
H21C0.76780.18940.66450.082*
U11U22U33U12U13U23
O10.0810 (15)0.0551 (12)0.0400 (9)−0.0012 (12)−0.0008 (9)−0.0079 (9)
O20.0463 (10)0.0431 (9)0.0411 (9)−0.0159 (8)0.0053 (7)0.0008 (8)
O30.0571 (11)0.0313 (8)0.0501 (10)0.0073 (8)0.0156 (8)0.0067 (7)
O40.0806 (15)0.0832 (17)0.0480 (11)−0.0383 (14)0.0209 (10)−0.0205 (10)
C10.0452 (13)0.0503 (14)0.0374 (12)−0.0085 (12)0.0109 (10)0.0003 (11)
C20.0565 (16)0.0568 (15)0.0380 (12)−0.0097 (14)0.0106 (11)0.0009 (11)
C30.0550 (15)0.0472 (14)0.0383 (12)0.0041 (13)0.0036 (11)−0.0058 (11)
C40.0495 (14)0.0386 (13)0.0471 (13)−0.0047 (11)0.0047 (11)−0.0069 (10)
C50.0405 (12)0.0307 (11)0.0441 (12)−0.0020 (10)0.0087 (10)−0.0033 (9)
C60.0463 (14)0.0444 (14)0.0533 (14)−0.0170 (12)0.0108 (11)−0.0031 (12)
C70.0540 (15)0.0400 (13)0.0491 (14)−0.0182 (12)0.0154 (11)0.0018 (11)
C80.0374 (11)0.0306 (10)0.0412 (11)−0.0044 (9)0.0142 (9)0.0002 (9)
C90.0316 (11)0.0288 (10)0.0362 (10)−0.0017 (9)0.0103 (8)−0.0013 (8)
C100.0365 (12)0.0303 (11)0.0376 (11)−0.0008 (9)0.0092 (8)−0.0005 (9)
C110.0372 (11)0.0335 (11)0.0393 (11)−0.0070 (10)0.0132 (9)0.0013 (9)
C120.0329 (11)0.0345 (12)0.0391 (11)−0.0029 (10)0.0120 (9)−0.0006 (9)
C130.0374 (11)0.0324 (10)0.0369 (11)−0.0013 (10)0.0129 (9)−0.0017 (9)
C140.0384 (12)0.0314 (11)0.0416 (12)−0.0031 (10)0.0155 (9)0.0008 (9)
C150.0569 (15)0.0443 (13)0.0441 (13)−0.0121 (12)0.0178 (11)0.0053 (11)
C160.0656 (17)0.0578 (16)0.0401 (13)−0.0111 (15)0.0134 (12)0.0057 (12)
C170.0461 (13)0.0412 (12)0.0343 (11)−0.0013 (11)0.0098 (9)−0.0007 (10)
C180.0419 (13)0.0385 (12)0.0505 (13)0.0019 (11)0.0183 (10)−0.0062 (10)
C190.0465 (13)0.0331 (11)0.0528 (14)0.0037 (11)0.0047 (11)−0.0009 (11)
C200.0483 (13)0.0439 (13)0.0397 (12)−0.0006 (12)0.0098 (10)−0.0033 (10)
C210.0740 (18)0.0466 (15)0.0462 (14)0.0022 (14)0.0200 (13)−0.0081 (12)
O1—C31.428 (3)C9—C111.531 (3)
O1—H10.88 (5)C9—C101.560 (3)
O2—C121.432 (3)C9—H90.9800
O2—H20.80 (4)C10—C191.530 (3)
O3—C141.440 (3)C11—C121.519 (3)
O3—H30.81 (4)C11—H11A0.9700
O4—C201.200 (3)C11—H11B0.9700
C1—C21.528 (3)C12—C131.533 (3)
C1—C101.538 (3)C12—H120.9800
C1—H1A0.9700C13—C181.534 (3)
C1—H1B0.9700C13—C141.552 (3)
C2—C31.510 (4)C13—C171.568 (3)
C2—H2A0.9700C14—C151.527 (3)
C2—H2B0.9700C15—C161.536 (4)
C3—C41.510 (4)C15—H15A0.9700
C3—H3A0.9800C15—H15B0.9700
C4—C51.532 (3)C16—C171.539 (4)
C4—H4A0.9700C16—H16A0.9700
C4—H4B0.9700C16—H16B0.9700
C5—C61.515 (3)C17—C201.513 (4)
C5—C101.546 (3)C17—H170.9800
C5—H50.9800C18—H18A0.9600
C6—C71.521 (4)C18—H18B0.9600
C6—H6A0.9700C18—H18C0.9600
C6—H6B0.9700C19—H19A0.9600
C7—C81.528 (3)C19—H19B0.9600
C7—H7A0.9700C19—H19C0.9600
C7—H7B0.9700C20—C211.489 (4)
C8—C141.532 (3)C21—H21A0.9600
C8—C91.536 (3)C21—H21B0.9600
C8—H80.9800C21—H21C0.9600
C3—O1—H1103 (3)C12—C11—C9114.89 (18)
C12—O2—H2106 (3)C12—C11—H11A108.5
C14—O3—H3102 (3)C9—C11—H11A108.5
C2—C1—C10113.85 (19)C12—C11—H11B108.5
C2—C1—H1A108.8C9—C11—H11B108.5
C10—C1—H1A108.8H11A—C11—H11B107.5
C2—C1—H1B108.8O2—C12—C11106.34 (17)
C10—C1—H1B108.8O2—C12—C13113.46 (19)
H1A—C1—H1B107.7C11—C12—C13111.22 (18)
C3—C2—C1111.3 (2)O2—C12—H12108.6
C3—C2—H2A109.4C11—C12—H12108.6
C1—C2—H2A109.4C13—C12—H12108.6
C3—C2—H2B109.4C12—C13—C18110.96 (19)
C1—C2—H2B109.4C12—C13—C14106.61 (18)
H2A—C2—H2B108.0C18—C13—C14112.93 (19)
O1—C3—C4112.1 (2)C12—C13—C17117.45 (19)
O1—C3—C2108.8 (2)C18—C13—C17109.21 (19)
C4—C3—C2110.5 (2)C14—C13—C1799.21 (18)
O1—C3—H3A108.5O3—C14—C15108.5 (2)
C4—C3—H3A108.5O3—C14—C8107.79 (18)
C2—C3—H3A108.5C15—C14—C8117.80 (19)
C3—C4—C5110.8 (2)O3—C14—C13107.04 (18)
C3—C4—H4A109.5C15—C14—C13103.07 (18)
C5—C4—H4A109.5C8—C14—C13112.14 (19)
C3—C4—H4B109.5C14—C15—C16104.3 (2)
C5—C4—H4B109.5C14—C15—H15A110.9
H4A—C4—H4B108.1C16—C15—H15A110.9
C6—C5—C4112.7 (2)C14—C15—H15B110.9
C6—C5—C10112.1 (2)C16—C15—H15B110.9
C4—C5—C10112.28 (19)H15A—C15—H15B108.9
C6—C5—H5106.4C15—C16—C17107.0 (2)
C4—C5—H5106.4C15—C16—H16A110.3
C10—C5—H5106.4C17—C16—H16A110.3
C5—C6—C7111.4 (2)C15—C16—H16B110.3
C5—C6—H6A109.4C17—C16—H16B110.3
C7—C6—H6A109.4H16A—C16—H16B108.6
C5—C6—H6B109.4C20—C17—C16117.6 (2)
C7—C6—H6B109.4C20—C17—C13114.9 (2)
H6A—C6—H6B108.0C16—C17—C13103.5 (2)
C6—C7—C8111.8 (2)C20—C17—H17106.7
C6—C7—H7A109.3C16—C17—H17106.7
C8—C7—H7A109.3C13—C17—H17106.7
C6—C7—H7B109.3C13—C18—H18A109.5
C8—C7—H7B109.3C13—C18—H18B109.5
H7A—C7—H7B107.9H18A—C18—H18B109.5
C7—C8—C14112.00 (19)C13—C18—H18C109.5
C7—C8—C9112.19 (19)H18A—C18—H18C109.5
C14—C8—C9108.93 (17)H18B—C18—H18C109.5
C7—C8—H8107.8C10—C19—H19A109.5
C14—C8—H8107.8C10—C19—H19B109.5
C9—C8—H8107.8H19A—C19—H19B109.5
C11—C9—C8110.64 (17)C10—C19—H19C109.5
C11—C9—C10113.70 (18)H19A—C19—H19C109.5
C8—C9—C10112.37 (17)H19B—C19—H19C109.5
C11—C9—H9106.5O4—C20—C21119.9 (3)
C8—C9—H9106.5O4—C20—C17120.5 (2)
C10—C9—H9106.5C21—C20—C17119.6 (2)
C19—C10—C1109.6 (2)C20—C21—H21A109.5
C19—C10—C5112.09 (18)C20—C21—H21B109.5
C1—C10—C5107.21 (19)H21A—C21—H21B109.5
C19—C10—C9111.28 (19)C20—C21—H21C109.5
C1—C10—C9109.66 (17)H21A—C21—H21C109.5
C5—C10—C9106.91 (18)H21B—C21—H21C109.5
C10—C1—C2—C3−55.5 (3)C11—C12—C13—C18−66.8 (2)
C1—C2—C3—O1178.7 (2)O2—C12—C13—C14176.39 (17)
C1—C2—C3—C455.3 (3)C11—C12—C13—C1456.5 (2)
O1—C3—C4—C5−178.8 (2)O2—C12—C13—C17−73.5 (3)
C2—C3—C4—C5−57.3 (3)C11—C12—C13—C17166.6 (2)
C3—C4—C5—C6−173.2 (2)C7—C8—C14—O368.6 (2)
C3—C4—C5—C1059.0 (3)C9—C8—C14—O3−56.1 (2)
C4—C5—C6—C7173.0 (2)C7—C8—C14—C15−54.5 (3)
C10—C5—C6—C7−59.2 (3)C9—C8—C14—C15−179.1 (2)
C5—C6—C7—C853.6 (3)C7—C8—C14—C13−173.83 (19)
C6—C7—C8—C14−174.2 (2)C9—C8—C14—C1361.5 (2)
C6—C7—C8—C9−51.3 (3)C12—C13—C14—O355.5 (2)
C7—C8—C9—C11−177.7 (2)C18—C13—C14—O3177.62 (18)
C14—C8—C9—C11−53.1 (2)C17—C13—C14—O3−66.9 (2)
C7—C8—C9—C1054.0 (2)C12—C13—C14—C15169.8 (2)
C14—C8—C9—C10178.61 (19)C18—C13—C14—C15−68.1 (2)
C2—C1—C10—C19−67.9 (3)C17—C13—C14—C1547.4 (2)
C2—C1—C10—C553.9 (3)C12—C13—C14—C8−62.5 (2)
C2—C1—C10—C9169.6 (2)C18—C13—C14—C859.6 (2)
C6—C5—C10—C19−63.2 (3)C17—C13—C14—C8175.10 (18)
C4—C5—C10—C1964.9 (3)O3—C14—C15—C1677.3 (3)
C6—C5—C10—C1176.6 (2)C8—C14—C15—C16−160.0 (2)
C4—C5—C10—C1−55.4 (2)C13—C14—C15—C16−35.9 (3)
C6—C5—C10—C959.0 (2)C14—C15—C16—C179.7 (3)
C4—C5—C10—C9−172.89 (18)C15—C16—C17—C20147.8 (2)
C11—C9—C10—C19−60.2 (2)C15—C16—C17—C1319.9 (3)
C8—C9—C10—C1966.4 (2)C12—C13—C17—C2075.4 (3)
C11—C9—C10—C161.2 (2)C18—C13—C17—C20−52.0 (3)
C8—C9—C10—C1−172.2 (2)C14—C13—C17—C20−170.3 (2)
C11—C9—C10—C5177.11 (18)C12—C13—C17—C16−155.0 (2)
C8—C9—C10—C5−56.2 (2)C18—C13—C17—C1677.6 (3)
C8—C9—C11—C1251.3 (2)C14—C13—C17—C16−40.8 (2)
C10—C9—C11—C12178.83 (19)C16—C17—C20—O4177.7 (3)
C9—C11—C12—O2−177.92 (18)C13—C17—C20—O4−60.1 (3)
C9—C11—C12—C13−53.9 (2)C16—C17—C20—C21−0.7 (4)
O2—C12—C13—C1853.0 (3)C13—C17—C20—C21121.5 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3···O4i0.81 (4)2.19 (4)2.916 (3)150 (3)
O2—H2···O40.80 (4)2.01 (4)2.771 (3)158 (3)
O1—H1···O2ii0.88 (5)2.05 (6)2.928 (3)170 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O4i0.81 (4)2.19 (4)2.916 (3)150 (3)
O2—H2⋯O40.80 (4)2.01 (4)2.771 (3)158 (3)
O1—H1⋯O2ii0.88 (5)2.05 (6)2.928 (3)170 (4)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Oxidative fragmentation of pregna-14,16-dien-20-ones to 14 beta-hydroxyandrost-15-en-17-ones.

Authors:  Jennifer D Fell; Clayton H Heathcock
Journal:  J Org Chem       Date:  2002-07-12       Impact factor: 4.354

3.  Remarkably selective reduction of the alpha,beta-carbon-carbon double bond in highly activated alpha,beta,gamma,delta-unsaturated alkenes by the InCl3-NaBH4 reagent system.

Authors:  Brindaban C Ranu; Sampak Samanta
Journal:  J Org Chem       Date:  2003-09-05       Impact factor: 4.354

  3 in total

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