| Literature DB >> 21583911 |
Zhang Ling1, Daxin Shi, Fan Yanqiu, Xia Wei, Jiarong Li.
Abstract
The title compound, C(14)H(18)N(2)O, was synthesized by the reaction of cyclo-hexa-none and 2-amino-5-methyl-benzonitrile. In the mol-ecule, the cyclo-hexane ring displays a chair conformation, whereas the 1,3-diaza-cyclo-hexane moiety of the bicyclic system has a sofa conformation with the spiro C atom displaced by 0.603 (2) Å from the rest of the atoms of the 1,3-diaza-cyclo-hexane ring [planar within 0.052 (2) Å]. Mol-ecules are linked into centrosymmetric dimers via N-H⋯O hydrogen bonds.Entities:
Year: 2009 PMID: 21583911 PMCID: PMC2977775 DOI: 10.1107/S1600536809014111
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H18N2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 3810 reflections |
| θ = 1.7–27.9° | |
| µ = 0.08 mm−1 | |
| β = 106.44 (3)° | Cube, colorless |
| 0.28 × 0.24 × 0.20 mm | |
| Rigaku Saturn CCD area-detector diffractometer | 2810 independent reflections |
| Radiation source: rotating anode | 2346 reflections with |
| confocal | |
| Detector resolution: 7.31 pixels mm-1 | θmax = 27.9°, θmin = 2.5° |
| ω and φ scans | |
| Absorption correction: multi-scan ( | |
| 14356 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2810 reflections | (Δ/σ)max = 0.003 |
| 163 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.01942 (8) | 0.42294 (7) | 0.36579 (7) | 0.0182 (2) | |
| N1 | 0.32706 (11) | 0.24403 (8) | 0.61566 (9) | 0.0167 (2) | |
| N2 | 0.16255 (10) | 0.39739 (8) | 0.56703 (8) | 0.0144 (2) | |
| C1 | 0.31997 (12) | 0.22860 (9) | 0.49040 (10) | 0.0153 (2) | |
| C2 | 0.39770 (12) | 0.14331 (9) | 0.44884 (11) | 0.0191 (2) | |
| H2 | 0.4588 | 0.0928 | 0.5078 | 0.023* | |
| C3 | 0.38557 (12) | 0.13253 (9) | 0.32154 (11) | 0.0197 (2) | |
| H3 | 0.4379 | 0.0736 | 0.2946 | 0.024* | |
| C4 | 0.29853 (12) | 0.20585 (9) | 0.23162 (10) | 0.0180 (2) | |
| C5 | 0.21867 (12) | 0.28808 (9) | 0.27333 (10) | 0.0163 (2) | |
| H5 | 0.1573 | 0.3381 | 0.2139 | 0.020* | |
| C6 | 0.22636 (11) | 0.29905 (9) | 0.40055 (10) | 0.0143 (2) | |
| C7 | 0.12913 (11) | 0.37917 (9) | 0.44220 (10) | 0.0141 (2) | |
| C8 | 0.29082 (14) | 0.19553 (11) | 0.09415 (11) | 0.0268 (3) | |
| H8A | 0.2017 | 0.2339 | 0.0431 | 0.040* | |
| H8B | 0.2869 | 0.1156 | 0.0707 | 0.040* | |
| H8C | 0.3789 | 0.2304 | 0.0793 | 0.040* | |
| C9 | 0.30268 (11) | 0.35816 (9) | 0.65516 (9) | 0.0142 (2) | |
| C10 | 0.28781 (13) | 0.35125 (9) | 0.78910 (10) | 0.0176 (2) | |
| H10A | 0.1961 | 0.3095 | 0.7872 | 0.021* | |
| H10B | 0.3726 | 0.3080 | 0.8423 | 0.021* | |
| C11 | 0.28289 (12) | 0.46671 (10) | 0.84905 (10) | 0.0192 (2) | |
| H11A | 0.2840 | 0.4566 | 0.9381 | 0.023* | |
| H11B | 0.1895 | 0.5055 | 0.8046 | 0.023* | |
| C12 | 0.41467 (13) | 0.53975 (10) | 0.84304 (10) | 0.0215 (3) | |
| H12A | 0.4071 | 0.6148 | 0.8799 | 0.026* | |
| H12B | 0.5081 | 0.5040 | 0.8927 | 0.026* | |
| C13 | 0.41659 (13) | 0.55324 (10) | 0.70664 (10) | 0.0204 (3) | |
| H13A | 0.5013 | 0.6013 | 0.7029 | 0.024* | |
| H13B | 0.3242 | 0.5906 | 0.6574 | 0.024* | |
| C14 | 0.43013 (12) | 0.43771 (9) | 0.64986 (10) | 0.0169 (2) | |
| H14A | 0.5257 | 0.4030 | 0.6963 | 0.020* | |
| H14B | 0.4303 | 0.4474 | 0.5610 | 0.020* | |
| H2A | 0.1067 (16) | 0.4493 (13) | 0.5919 (13) | 0.027 (4)* | |
| H1 | 0.3942 (18) | 0.2055 (13) | 0.6744 (14) | 0.031 (4)* |
| O1 | 0.0160 (4) | 0.0208 (4) | 0.0164 (4) | 0.0053 (3) | 0.0024 (3) | 0.0005 (3) |
| N1 | 0.0198 (5) | 0.0136 (5) | 0.0159 (5) | 0.0048 (4) | 0.0040 (4) | 0.0011 (3) |
| N2 | 0.0131 (4) | 0.0143 (4) | 0.0157 (4) | 0.0030 (3) | 0.0039 (3) | −0.0006 (3) |
| C1 | 0.0143 (5) | 0.0135 (5) | 0.0181 (5) | −0.0014 (4) | 0.0048 (4) | −0.0013 (4) |
| C2 | 0.0187 (5) | 0.0154 (5) | 0.0226 (6) | 0.0040 (4) | 0.0045 (4) | −0.0011 (4) |
| C3 | 0.0175 (5) | 0.0178 (5) | 0.0247 (6) | 0.0007 (4) | 0.0073 (4) | −0.0065 (4) |
| C4 | 0.0153 (5) | 0.0199 (6) | 0.0192 (5) | −0.0034 (4) | 0.0058 (4) | −0.0052 (4) |
| C5 | 0.0135 (5) | 0.0171 (5) | 0.0176 (5) | −0.0014 (4) | 0.0034 (4) | −0.0018 (4) |
| C6 | 0.0124 (5) | 0.0126 (5) | 0.0178 (5) | −0.0014 (4) | 0.0042 (4) | −0.0015 (4) |
| C7 | 0.0124 (5) | 0.0128 (5) | 0.0172 (5) | −0.0012 (4) | 0.0045 (4) | 0.0005 (4) |
| C8 | 0.0291 (6) | 0.0327 (7) | 0.0198 (6) | 0.0046 (5) | 0.0090 (5) | −0.0052 (5) |
| C9 | 0.0140 (5) | 0.0135 (5) | 0.0142 (5) | 0.0020 (4) | 0.0027 (4) | −0.0001 (4) |
| C10 | 0.0207 (5) | 0.0178 (5) | 0.0148 (5) | 0.0019 (4) | 0.0056 (4) | 0.0020 (4) |
| C11 | 0.0196 (5) | 0.0226 (6) | 0.0144 (5) | 0.0036 (4) | 0.0031 (4) | −0.0017 (4) |
| C12 | 0.0196 (6) | 0.0231 (6) | 0.0186 (5) | 0.0002 (5) | 0.0004 (4) | −0.0059 (4) |
| C13 | 0.0196 (5) | 0.0175 (6) | 0.0224 (6) | −0.0032 (4) | 0.0033 (4) | −0.0012 (4) |
| C14 | 0.0140 (5) | 0.0183 (5) | 0.0180 (5) | −0.0009 (4) | 0.0042 (4) | −0.0003 (4) |
| O1—C7 | 1.2472 (13) | C8—H8B | 0.9800 |
| N1—C1 | 1.3810 (14) | C8—H8C | 0.9800 |
| N1—C9 | 1.4596 (14) | C9—C10 | 1.5299 (14) |
| N1—H1 | 0.893 (16) | C9—C14 | 1.5394 (15) |
| N2—C7 | 1.3446 (13) | C10—C11 | 1.5273 (16) |
| N2—C9 | 1.4757 (14) | C10—H10A | 0.9900 |
| N2—H2A | 0.901 (16) | C10—H10B | 0.9900 |
| C1—C2 | 1.3995 (15) | C11—C12 | 1.5289 (16) |
| C1—C6 | 1.4022 (15) | C11—H11A | 0.9900 |
| C2—C3 | 1.3867 (15) | C11—H11B | 0.9900 |
| C2—H2 | 0.9500 | C12—C13 | 1.5232 (16) |
| C3—C4 | 1.3982 (17) | C12—H12A | 0.9900 |
| C3—H3 | 0.9500 | C12—H12B | 0.9900 |
| C4—C5 | 1.3870 (15) | C13—C14 | 1.5269 (15) |
| C4—C8 | 1.5074 (15) | C13—H13A | 0.9900 |
| C5—C6 | 1.3953 (14) | C13—H13B | 0.9900 |
| C5—H5 | 0.9500 | C14—H14A | 0.9900 |
| C6—C7 | 1.4797 (14) | C14—H14B | 0.9900 |
| C8—H8A | 0.9800 | ||
| C1—N1—C9 | 117.15 (9) | N2—C9—C10 | 110.35 (9) |
| C1—N1—H1 | 119.1 (10) | N1—C9—C14 | 111.48 (9) |
| C9—N1—H1 | 113.2 (10) | N2—C9—C14 | 109.97 (8) |
| C7—N2—C9 | 122.26 (9) | C10—C9—C14 | 110.82 (9) |
| C7—N2—H2A | 115.9 (9) | C11—C10—C9 | 113.28 (9) |
| C9—N2—H2A | 120.1 (9) | C11—C10—H10A | 108.9 |
| N1—C1—C2 | 122.97 (10) | C9—C10—H10A | 108.9 |
| N1—C1—C6 | 118.37 (10) | C11—C10—H10B | 108.9 |
| C2—C1—C6 | 118.61 (10) | C9—C10—H10B | 108.9 |
| C3—C2—C1 | 120.00 (10) | H10A—C10—H10B | 107.7 |
| C3—C2—H2 | 120.0 | C10—C11—C12 | 111.34 (9) |
| C1—C2—H2 | 120.0 | C10—C11—H11A | 109.4 |
| C2—C3—C4 | 121.94 (10) | C12—C11—H11A | 109.4 |
| C2—C3—H3 | 119.0 | C10—C11—H11B | 109.4 |
| C4—C3—H3 | 119.0 | C12—C11—H11B | 109.4 |
| C5—C4—C3 | 117.59 (10) | H11A—C11—H11B | 108.0 |
| C5—C4—C8 | 121.13 (10) | C13—C12—C11 | 109.86 (9) |
| C3—C4—C8 | 121.28 (10) | C13—C12—H12A | 109.7 |
| C4—C5—C6 | 121.54 (10) | C11—C12—H12A | 109.7 |
| C4—C5—H5 | 119.2 | C13—C12—H12B | 109.7 |
| C6—C5—H5 | 119.2 | C11—C12—H12B | 109.7 |
| C5—C6—C1 | 120.19 (10) | H12A—C12—H12B | 108.2 |
| C5—C6—C7 | 120.94 (9) | C12—C13—C14 | 109.84 (9) |
| C1—C6—C7 | 118.74 (9) | C12—C13—H13A | 109.7 |
| O1—C7—N2 | 122.54 (10) | C14—C13—H13A | 109.7 |
| O1—C7—C6 | 121.44 (9) | C12—C13—H13B | 109.7 |
| N2—C7—C6 | 115.95 (9) | C14—C13—H13B | 109.7 |
| C4—C8—H8A | 109.5 | H13A—C13—H13B | 108.2 |
| C4—C8—H8B | 109.5 | C13—C14—C9 | 112.16 (9) |
| H8A—C8—H8B | 109.5 | C13—C14—H14A | 109.2 |
| C4—C8—H8C | 109.5 | C9—C14—H14A | 109.2 |
| H8A—C8—H8C | 109.5 | C13—C14—H14B | 109.2 |
| H8B—C8—H8C | 109.5 | C9—C14—H14B | 109.2 |
| N1—C9—N2 | 106.31 (8) | H14A—C14—H14B | 107.9 |
| N1—C9—C10 | 107.80 (8) | ||
| C9—N1—C1—C2 | 152.24 (10) | C5—C6—C7—N2 | −168.95 (9) |
| C9—N1—C1—C6 | −30.19 (14) | C1—C6—C7—N2 | 15.21 (14) |
| N1—C1—C2—C3 | 179.98 (10) | C1—N1—C9—N2 | 51.63 (12) |
| C6—C1—C2—C3 | 2.41 (16) | C1—N1—C9—C10 | 169.95 (9) |
| C1—C2—C3—C4 | 0.84 (17) | C1—N1—C9—C14 | −68.21 (12) |
| C2—C3—C4—C5 | −2.60 (16) | C7—N2—C9—N1 | −42.79 (13) |
| C2—C3—C4—C8 | 177.80 (11) | C7—N2—C9—C10 | −159.42 (9) |
| C3—C4—C5—C6 | 1.10 (16) | C7—N2—C9—C14 | 78.03 (12) |
| C8—C4—C5—C6 | −179.30 (10) | N1—C9—C10—C11 | 172.15 (9) |
| C4—C5—C6—C1 | 2.13 (16) | N2—C9—C10—C11 | −72.16 (11) |
| C4—C5—C6—C7 | −173.64 (10) | C14—C9—C10—C11 | 49.90 (12) |
| N1—C1—C6—C5 | 178.45 (9) | C9—C10—C11—C12 | −53.09 (12) |
| C2—C1—C6—C5 | −3.87 (16) | C10—C11—C12—C13 | 57.52 (12) |
| N1—C1—C6—C7 | −5.69 (15) | C11—C12—C13—C14 | −60.01 (12) |
| C2—C1—C6—C7 | 171.99 (9) | C12—C13—C14—C9 | 58.30 (12) |
| C9—N2—C7—O1 | −171.57 (10) | N1—C9—C14—C13 | −172.67 (8) |
| C9—N2—C7—C6 | 11.38 (14) | N2—C9—C14—C13 | 69.67 (11) |
| C5—C6—C7—O1 | 13.96 (15) | C10—C9—C14—C13 | −52.60 (11) |
| C1—C6—C7—O1 | −161.87 (10) |
| H··· | ||||
| N2—H2A···O1i | 0.901 (16) | 2.058 (16) | 2.9563 (13) | 174.5 (13) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.901 (16) | 2.058 (16) | 2.9563 (13) | 174.5 (13) |
Symmetry code: (i) .