| Literature DB >> 21583878 |
Zhi-Yong Gao1, Jiu-Li Chang, Dong Xian, Kai Jiang.
Abstract
The crystal structure of the title compound, C(12)H(17)N(3)O(2) (+)·ClO(4) (-), consists of 4,4,5,5-tetra-methyl-2-(4-pyridinio)imidazoline-1-oxyl-3-oxide radical cations and perchlorate anions. Both the cation and the Cl atom of the anion are located on the same twofold rotation axis, and the crystal structure shows the average structure for the radical cation. The five-membered ring assumes a half-chair conformation. The cation links with the anion via N-H⋯O hydrogen bonding.Entities:
Year: 2009 PMID: 21583878 PMCID: PMC2977742 DOI: 10.1107/S1600536809013531
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H17N3O2+·ClO4− | |
| Orthorhombic, | Mo |
| Hall symbol: F 2 -2d | Cell parameters from 2949 reflections |
| θ = 2.3–29.0° | |
| µ = 0.28 mm−1 | |
| Block, dark-purple | |
| 0.33 × 0.26 × 0.23 mm |
| Bruker SMART CCD area-detector diffractometer | 1204 independent reflections |
| Radiation source: fine-focus sealed tube | 1169 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.5°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 3994 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.27 e Å−3 | |
| 1204 reflections | Δρmin = −0.15 e Å−3 |
| 103 parameters | Extinction correction: |
| 1 restraint | Extinction coefficient: 0.0026 (5) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 457 Friedel pairs |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.12 (10) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.0000 | 0.5000 | 0.05797 (7) | 0.0787 (4) | |
| O2 | 0.0203 (2) | 0.4065 (5) | 0.0039 (3) | 0.1497 (15) | |
| O3 | 0.06280 (15) | 0.5281 (3) | 0.1140 (2) | 0.1055 (9) | |
| N1 | 0.0000 | 0.5000 | 0.2971 (2) | 0.0684 (10) | |
| H1B | 0.0000 | 0.5000 | 0.2395 | 0.082* | |
| N2 | 0.05399 (9) | 0.54721 (12) | 0.62987 (12) | 0.0399 (4) | |
| C1 | 0.04640 (17) | 0.5698 (2) | 0.33929 (18) | 0.0626 (6) | |
| H1A | 0.0785 | 0.6169 | 0.3067 | 0.075* | |
| C2 | 0.04743 (13) | 0.57302 (19) | 0.43134 (16) | 0.0520 (5) | |
| H2A | 0.0793 | 0.6232 | 0.4614 | 0.062* | |
| C3 | 0.0000 | 0.5000 | 0.4789 (2) | 0.0417 (6) | |
| C4 | 0.0000 | 0.5000 | 0.5764 (2) | 0.0379 (6) | |
| C5 | 0.02991 (11) | 0.54883 (16) | 0.72622 (14) | 0.0425 (5) | |
| C6 | 0.09853 (14) | 0.5301 (2) | 0.78664 (19) | 0.0630 (6) | |
| H6A | 0.1322 | 0.5939 | 0.7827 | 0.095* | |
| H6B | 0.1253 | 0.4634 | 0.7680 | 0.095* | |
| H6C | 0.0816 | 0.5213 | 0.8474 | 0.095* | |
| C7 | −0.00457 (14) | 0.66478 (19) | 0.74312 (19) | 0.0616 (7) | |
| H7A | 0.0352 | 0.7206 | 0.7422 | 0.092* | |
| H7B | −0.0293 | 0.6654 | 0.8006 | 0.092* | |
| H7C | −0.0414 | 0.6815 | 0.6972 | 0.092* | |
| O1 | 0.11652 (8) | 0.59302 (15) | 0.60418 (12) | 0.0599 (5) |
| Cl1 | 0.0631 (5) | 0.1338 (9) | 0.0392 (5) | −0.0116 (5) | 0.000 | 0.000 |
| O2 | 0.154 (3) | 0.199 (4) | 0.096 (3) | 0.023 (3) | 0.013 (2) | −0.053 (3) |
| O3 | 0.0789 (14) | 0.167 (2) | 0.0707 (17) | −0.0372 (15) | −0.0088 (13) | 0.0105 (16) |
| N1 | 0.092 (2) | 0.0776 (18) | 0.0360 (17) | 0.0404 (17) | 0.000 | 0.000 |
| N2 | 0.0356 (7) | 0.0440 (7) | 0.0400 (10) | −0.0075 (6) | −0.0005 (7) | −0.0002 (6) |
| C1 | 0.0729 (15) | 0.0692 (14) | 0.0457 (14) | 0.0203 (11) | 0.0104 (11) | 0.0154 (11) |
| C2 | 0.0547 (12) | 0.0570 (10) | 0.0443 (13) | 0.0068 (9) | 0.0035 (9) | 0.0088 (9) |
| C3 | 0.0394 (13) | 0.0430 (12) | 0.0425 (18) | 0.0116 (10) | 0.000 | 0.000 |
| C4 | 0.0367 (12) | 0.0376 (12) | 0.0394 (18) | −0.0002 (9) | 0.000 | 0.000 |
| C5 | 0.0409 (10) | 0.0499 (10) | 0.0368 (11) | −0.0056 (9) | −0.0015 (9) | −0.0025 (8) |
| C6 | 0.0548 (12) | 0.0865 (15) | 0.0478 (15) | −0.0160 (12) | −0.0141 (11) | 0.0046 (11) |
| C7 | 0.0683 (14) | 0.0550 (11) | 0.0614 (17) | −0.0014 (10) | 0.0048 (12) | −0.0153 (10) |
| O1 | 0.0461 (7) | 0.0784 (10) | 0.0553 (11) | −0.0250 (7) | 0.0047 (7) | 0.0008 (8) |
| Cl1—O2i | 1.416 (4) | C2—H2A | 0.9300 |
| Cl1—O2 | 1.416 (4) | C3—C2i | 1.393 (3) |
| Cl1—O3 | 1.420 (3) | C3—C4 | 1.455 (4) |
| Cl1—O3i | 1.420 (3) | C4—N2i | 1.357 (2) |
| N1—C1 | 1.318 (4) | C5—C6 | 1.517 (3) |
| N1—C1i | 1.318 (4) | C5—C7 | 1.522 (3) |
| N1—H1B | 0.8600 | C5—C5i | 1.560 (4) |
| N2—O1 | 1.280 (2) | C6—H6A | 0.9600 |
| N2—C4 | 1.357 (2) | C6—H6B | 0.9600 |
| N2—C5 | 1.498 (3) | C6—H6C | 0.9600 |
| C1—C2 | 1.374 (4) | C7—H7A | 0.9600 |
| C1—H1A | 0.9300 | C7—H7B | 0.9600 |
| C2—C3 | 1.393 (3) | C7—H7C | 0.9600 |
| O2i—Cl1—O2 | 110.5 (5) | N2—C4—N2i | 108.0 (3) |
| O2i—Cl1—O3 | 110.2 (3) | N2—C4—C3 | 126.01 (13) |
| O2—Cl1—O3 | 109.0 (2) | N2i—C4—C3 | 126.01 (13) |
| O2i—Cl1—O3i | 109.0 (2) | N2—C5—C6 | 110.26 (18) |
| O2—Cl1—O3i | 110.2 (3) | N2—C5—C7 | 106.37 (18) |
| O3—Cl1—O3i | 107.9 (2) | C6—C5—C7 | 110.28 (19) |
| C1—N1—C1i | 123.0 (3) | N2—C5—C5i | 100.31 (10) |
| C1—N1—H1B | 118.5 | C6—C5—C5i | 114.96 (17) |
| C1i—N1—H1B | 118.5 | C7—C5—C5i | 113.9 (2) |
| O1—N2—C4 | 126.40 (18) | C5—C6—H6A | 109.5 |
| O1—N2—C5 | 121.47 (16) | C5—C6—H6B | 109.5 |
| C4—N2—C5 | 111.96 (16) | H6A—C6—H6B | 109.5 |
| N1—C1—C2 | 120.2 (3) | C5—C6—H6C | 109.5 |
| N1—C1—H1A | 119.9 | H6A—C6—H6C | 109.5 |
| C2—C1—H1A | 119.9 | H6B—C6—H6C | 109.5 |
| C1—C2—C3 | 118.9 (2) | C5—C7—H7A | 109.5 |
| C1—C2—H2A | 120.5 | C5—C7—H7B | 109.5 |
| C3—C2—H2A | 120.5 | H7A—C7—H7B | 109.5 |
| C2i—C3—C2 | 118.8 (3) | C5—C7—H7C | 109.5 |
| C2i—C3—C4 | 120.61 (16) | H7A—C7—H7C | 109.5 |
| C2—C3—C4 | 120.61 (16) | H7B—C7—H7C | 109.5 |
| C1i—N1—C1—C2 | −0.68 (16) | C2—C3—C4—N2 | −15.56 (13) |
| N1—C1—C2—C3 | 1.3 (3) | C2i—C3—C4—N2i | −15.56 (13) |
| C1—C2—C3—C2i | −0.65 (15) | C2—C3—C4—N2i | 164.44 (13) |
| C1—C2—C3—C4 | 179.35 (15) | O1—N2—C5—C6 | −39.6 (2) |
| O1—N2—C4—N2i | 175.0 (2) | C4—N2—C5—C6 | 144.69 (16) |
| C5—N2—C4—N2i | −9.58 (9) | O1—N2—C5—C7 | 80.0 (2) |
| O1—N2—C4—C3 | −5.0 (2) | C4—N2—C5—C7 | −95.74 (16) |
| C5—N2—C4—C3 | 170.42 (9) | O1—N2—C5—C5i | −161.21 (18) |
| C2i—C3—C4—N2 | 164.44 (13) | C4—N2—C5—C5i | 23.1 (2) |
| H··· | ||||
| N1—H1B···O3 | 0.86 | 2.20 | 2.963 (4) | 149 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.20 | 2.963 (4) | 149 |