Literature DB >> 21583864

2,2-Diphenyl-benzo[c]quinoline-1-ox-yl.

Corrado Rizzoli, Elda Marku, Lucedio Greci, Paola Astolfi.   

Abstract

In the title compound, C(25)H(18)NO, a stable phenanthridinic nitroxide, the ring containing the nitroxide function assumes a twist-boat conformation and the dihedral angle formed by adjacent benzene rings is 21.78 (5)°. The phenyl substituents at position 2 are approximately orthogonal to each other, forming a dihedral angle of 81.04 (4)°. The crystal structure is stabilized by an intra-molecular C-H⋯O hydrogen bond and by C-H⋯π inter-actions.

Entities:  

Year:  2009        PMID: 21583864      PMCID: PMC2977728          DOI: 10.1107/S1600536809013476

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of nitroxides in biology, see: Carloni et al. (1996 ▶); Greci (1982 ▶); Likhtenshtein et al. (2008 ▶). For their applications in medicine, see: Damiani et al. (2008 ▶); Krishna et al. (1996 ▶). For their use in pharmacology and cosmetics, see: Krishna et al. (1996 ▶); Setjurc et al. (1995 ▶); Greci et al. (2007 ▶). For their applications in chemical processes and materials science, see: Guillaneuf et al. (2007 ▶); Arends et al. (2006 ▶); Franchi et al. (2008 ▶); Bailly et al. (2006 ▶); Bugnon et al. (2007 ▶). For a description of the Cambridge structural Database, see: Allen (2002 ▶); For puckering parameters, see: Cremer & Pople (1975 ▶). For graph-set motifs, see: Etter et al. (1990 ▶). For the synthesis, see: Colonna et al. (1980 ▶).

Experimental

Crystal data

C25H18NO M = 348.40 Monoclinic, a = 12.6188 (12) Å b = 8.8704 (8) Å c = 16.6083 (15) Å β = 102.998 (2)° V = 1811.4 (3) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 295 K 0.16 × 0.14 × 0.08 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.972, T max = 0.990 18472 measured reflections 3548 independent reflections 2115 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.080 S = 1.01 3548 reflections 244 parameters H-atom parameters constrained Δρmax = 0.11 e Å−3 Δρmin = −0.14 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT-Plus (Bruker, 1998 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and SCHAKAL97 (Keller, 1997 ▶); software used to prepare material for publication: SHELXL97, PARST95 (Nardelli, 1995 ▶) and WinSim (Duling, 1994 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809013476/fb2149sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809013476/fb2149Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H18NOF(000) = 732
Mr = 348.40Dx = 1.278 Mg m3
Monoclinic, P21/cMelting point = 449–450 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 12.6188 (12) ÅCell parameters from 1226 reflections
b = 8.8704 (8) Åθ = 3.2–24.8°
c = 16.6083 (15) ŵ = 0.08 mm1
β = 102.998 (2)°T = 295 K
V = 1811.4 (3) Å3Block, red
Z = 40.16 × 0.14 × 0.08 mm
Bruker SMART 1000 CCD diffractometer3548 independent reflections
Radiation source: fine-focus sealed tube2115 reflections with I > 2σ(I)
graphiteRint = 0.047
ω scansθmax = 26.0°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 1998)h = −15→15
Tmin = 0.972, Tmax = 0.990k = −10→10
18472 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: difference Fourier map
wR(F2) = 0.080H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0321P)2] where P = (Fo2 + 2Fc2)/3
3548 reflections(Δ/σ)max < 0.001
244 parametersΔρmax = 0.11 e Å3
0 restraintsΔρmin = −0.14 e Å3
72 constraints
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.26974 (9)0.84150 (12)0.17884 (7)0.0436 (3)
O10.29038 (8)0.90766 (11)0.24920 (6)0.0590 (3)
C20.29264 (10)0.61901 (15)0.09755 (8)0.0406 (3)
C200.13820 (10)0.64080 (15)0.17300 (7)0.0386 (3)
C130.22201 (11)0.92305 (16)0.10729 (9)0.0443 (3)
C80.21679 (11)0.85600 (16)0.03064 (8)0.0458 (4)
C140.33392 (11)0.60524 (16)0.25222 (8)0.0445 (4)
C10.25883 (11)0.67236 (14)0.17575 (8)0.0391 (3)
C70.26972 (11)0.70981 (15)0.02684 (8)0.0424 (3)
C60.30162 (12)0.66030 (18)−0.04392 (9)0.0526 (4)
H60.28960.7217−0.09050.063*
C250.07658 (13)0.54387 (17)0.11658 (9)0.0550 (4)
H250.10750.49640.07750.066*
C30.34171 (12)0.48029 (16)0.09411 (9)0.0537 (4)
H30.35600.41860.14060.064*
C210.08830 (12)0.71122 (17)0.22877 (9)0.0512 (4)
H210.12800.77850.26680.061*
C22−0.01884 (13)0.68398 (18)0.22926 (10)0.0595 (4)
H22−0.05060.73280.26750.071*
C50.35039 (12)0.52270 (19)−0.04600 (9)0.0596 (4)
H50.37030.4908−0.09380.072*
C23−0.07899 (13)0.58527 (19)0.17372 (10)0.0610 (4)
H23−0.15120.56560.17440.073*
C120.18124 (13)1.06672 (18)0.11352 (10)0.0621 (4)
H120.18841.11220.16490.074*
C150.30015 (13)0.48928 (18)0.29547 (9)0.0603 (4)
H150.22850.45600.28070.072*
C24−0.03136 (13)0.51648 (19)0.11758 (10)0.0647 (5)
H24−0.07180.45010.07930.078*
C90.16276 (13)0.9348 (2)−0.03924 (10)0.0646 (5)
H90.15620.8914−0.09110.078*
C190.44123 (12)0.65176 (19)0.27533 (9)0.0614 (4)
H190.46580.72910.24640.074*
C40.36960 (13)0.43243 (19)0.02258 (10)0.0622 (4)
H40.40160.33840.02100.075*
C100.11911 (15)1.0748 (2)−0.03309 (13)0.0808 (6)
H100.08211.1245−0.08040.097*
C110.13017 (15)1.1411 (2)0.04279 (13)0.0782 (5)
H110.10281.23750.04650.094*
C180.51180 (15)0.5847 (2)0.34067 (11)0.0777 (6)
H180.58350.61780.35580.093*
C160.37243 (17)0.4214 (2)0.36115 (10)0.0838 (6)
H160.34910.34260.38990.101*
C170.47781 (18)0.4703 (3)0.38350 (11)0.0866 (6)
H170.52600.42570.42770.104*
U11U22U33U12U13U23
N10.0451 (7)0.0437 (7)0.0430 (7)−0.0050 (5)0.0120 (5)−0.0072 (6)
O10.0672 (7)0.0597 (7)0.0499 (6)−0.0065 (5)0.0130 (5)−0.0191 (5)
C20.0382 (8)0.0459 (9)0.0375 (8)−0.0026 (7)0.0083 (6)−0.0042 (7)
C200.0412 (8)0.0409 (8)0.0328 (7)−0.0012 (6)0.0067 (6)0.0045 (6)
C130.0407 (8)0.0414 (9)0.0518 (9)−0.0035 (7)0.0126 (7)0.0040 (7)
C80.0435 (9)0.0484 (9)0.0465 (9)−0.0048 (7)0.0121 (7)0.0064 (7)
C140.0442 (9)0.0538 (9)0.0347 (7)0.0060 (7)0.0073 (6)−0.0024 (7)
C10.0428 (8)0.0391 (8)0.0350 (7)−0.0008 (6)0.0081 (6)−0.0008 (6)
C70.0383 (8)0.0501 (9)0.0386 (8)−0.0081 (7)0.0085 (6)−0.0028 (7)
C60.0482 (9)0.0708 (11)0.0396 (9)−0.0065 (8)0.0115 (7)−0.0004 (8)
C250.0578 (10)0.0598 (10)0.0492 (9)−0.0158 (8)0.0159 (8)−0.0097 (8)
C30.0627 (10)0.0526 (10)0.0460 (9)0.0061 (8)0.0128 (8)−0.0018 (7)
C210.0474 (9)0.0599 (10)0.0467 (9)−0.0056 (7)0.0113 (7)−0.0060 (7)
C220.0504 (10)0.0726 (11)0.0592 (10)−0.0016 (8)0.0205 (8)−0.0002 (9)
C50.0520 (10)0.0823 (13)0.0468 (9)−0.0012 (9)0.0159 (8)−0.0138 (9)
C230.0452 (9)0.0765 (12)0.0610 (10)−0.0096 (9)0.0112 (8)0.0115 (9)
C120.0625 (11)0.0494 (10)0.0782 (12)−0.0006 (8)0.0241 (9)−0.0012 (9)
C150.0582 (10)0.0713 (11)0.0513 (9)0.0106 (8)0.0119 (8)0.0165 (8)
C240.0612 (11)0.0725 (12)0.0577 (10)−0.0262 (9)0.0076 (9)−0.0069 (9)
C90.0687 (11)0.0689 (12)0.0558 (10)0.0025 (9)0.0129 (9)0.0158 (9)
C190.0491 (10)0.0752 (12)0.0560 (10)0.0062 (8)0.0035 (8)−0.0030 (9)
C40.0652 (11)0.0634 (11)0.0591 (10)0.0113 (8)0.0164 (8)−0.0149 (9)
C100.0855 (14)0.0726 (13)0.0831 (14)0.0150 (11)0.0166 (11)0.0324 (11)
C110.0866 (14)0.0491 (11)0.0998 (15)0.0135 (9)0.0229 (12)0.0181 (11)
C180.0564 (11)0.0990 (15)0.0687 (12)0.0196 (11)−0.0048 (10)−0.0123 (12)
C160.0889 (16)0.0997 (15)0.0638 (12)0.0323 (12)0.0192 (11)0.0338 (11)
C170.0782 (15)0.1184 (18)0.0552 (11)0.0486 (13)−0.0020 (11)0.0070 (12)
N1—O11.2811 (13)C22—C231.371 (2)
N1—C131.4057 (17)C22—H220.9300
N1—C11.5064 (16)C5—C41.369 (2)
C2—C31.3844 (18)C5—H50.9300
C2—C71.3994 (18)C23—C241.362 (2)
C2—C11.5305 (17)C23—H230.9300
C20—C251.3763 (18)C12—C111.375 (2)
C20—C211.3810 (18)C12—H120.9300
C20—C11.5383 (18)C15—C161.392 (2)
C13—C121.387 (2)C15—H150.9300
C13—C81.3933 (18)C24—H240.9300
C8—C91.3942 (19)C9—C101.372 (2)
C8—C71.4665 (19)C9—H90.9300
C14—C151.3760 (19)C19—C181.375 (2)
C14—C191.385 (2)C19—H190.9300
C14—C11.5244 (17)C4—H40.9300
C7—C61.3961 (19)C10—C111.369 (2)
C6—C51.371 (2)C10—H100.9300
C6—H60.9300C11—H110.9300
C25—C241.387 (2)C18—C171.363 (3)
C25—H250.9300C18—H180.9300
C3—C41.3796 (19)C16—C171.368 (3)
C3—H30.9300C16—H160.9300
C21—C221.375 (2)C17—H170.9300
C21—H210.9300
O1—N1—C13119.72 (11)C21—C22—H22119.8
O1—N1—C1119.05 (10)C4—C5—C6119.76 (14)
C13—N1—C1117.73 (11)C4—C5—H5120.1
C3—C2—C7119.14 (13)C6—C5—H5120.1
C3—C2—C1121.50 (12)C24—C23—C22118.95 (15)
C7—C2—C1119.32 (12)C24—C23—H23120.5
C25—C20—C21117.79 (13)C22—C23—H23120.5
C25—C20—C1122.53 (12)C11—C12—C13119.18 (16)
C21—C20—C1119.68 (12)C11—C12—H12120.4
C12—C13—C8121.22 (14)C13—C12—H12120.4
C12—C13—N1120.37 (13)C14—C15—C16120.49 (16)
C8—C13—N1118.42 (13)C14—C15—H15119.8
C13—C8—C9117.42 (14)C16—C15—H15119.8
C13—C8—C7119.23 (12)C23—C24—C25121.02 (15)
C9—C8—C7123.33 (14)C23—C24—H24119.5
C15—C14—C19118.45 (14)C25—C24—H24119.5
C15—C14—C1121.29 (13)C10—C9—C8121.41 (16)
C19—C14—C1120.02 (13)C10—C9—H9119.3
N1—C1—C14109.01 (10)C8—C9—H9119.3
N1—C1—C2107.22 (10)C18—C19—C14120.63 (17)
C14—C1—C2110.28 (11)C18—C19—H19119.7
N1—C1—C20105.34 (10)C14—C19—H19119.7
C14—C1—C20112.28 (10)C5—C4—C3120.32 (15)
C2—C1—C20112.42 (10)C5—C4—H4119.8
C6—C7—C2118.75 (13)C3—C4—H4119.8
C6—C7—C8122.32 (13)C11—C10—C9119.86 (17)
C2—C7—C8118.88 (12)C11—C10—H10120.1
C5—C6—C7121.16 (14)C9—C10—H10120.1
C5—C6—H6119.4C10—C11—C12120.78 (17)
C7—C6—H6119.4C10—C11—H11119.6
C20—C25—C24120.47 (14)C12—C11—H11119.6
C20—C25—H25119.8C17—C18—C19120.67 (18)
C24—C25—H25119.8C17—C18—H18119.7
C4—C3—C2120.80 (14)C19—C18—H18119.7
C4—C3—H3119.6C17—C16—C15120.05 (18)
C2—C3—H3119.6C17—C16—H16120.0
C22—C21—C20121.45 (14)C15—C16—H16120.0
C22—C21—H21119.3C18—C17—C16119.70 (17)
C20—C21—H21119.3C18—C17—H17120.2
C23—C22—C21120.30 (15)C16—C17—H17120.2
C23—C22—H22119.8
D—H···AD—HH···AD···AD—H···A
C21—H21···O10.932.423.044 (2)124
C24—H24···Cg1i0.933.273.864 (3)136
C6—H6···Cg2ii0.933.163.932 (4)142
C10—H10···Cg3iii0.932.973.839 (4)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C21—H21⋯O10.932.423.044 (2)124
C24—H24⋯Cg1i0.933.273.864 (3)136
C6—H6⋯Cg2ii0.933.163.932 (4)142
C10—H10⋯Cg3iii0.932.973.839 (4)154

Symmetry codes: (i) ; (ii) ; (iii) . Cg1, Cg2 and Cg3 are the centroids of the C2–C7, C14–C19 and C20–C25 aromatic rings, respectively.

  6 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Increasing the persistency of stable free-radicals: synthesis and characterization of a nitroxide based [1]rotaxane.

Authors:  Paola Franchi; Michela Fanì; Elisabetta Mezzina; Marco Lucarini
Journal:  Org Lett       Date:  2008-04-16       Impact factor: 6.005

4.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

5.  Simulation of multiple isotropic spin-trap EPR spectra.

Authors:  D R Duling
Journal:  J Magn Reson B       Date:  1994-06

6.  Stimulation by nitroxides of catalase-like activity of hemeproteins. Kinetics and mechanism.

Authors:  M C Krishna; A Samuni; J Taira; S Goldstein; J B Mitchell; A Russo
Journal:  J Biol Chem       Date:  1996-10-18       Impact factor: 5.157

  6 in total

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