Literature DB >> 21583857

Imidazolium 3-nitro-benzoate.

Guang-Yang Hou1, Li-Na Zhou, Qiu-Xiang Yin, Wei-Yi Su, Hui-Lin Mao.   

Abstract

In the title compound, C(3)H(5)N(2) (+)·C(7)H(4)NO(4) (-), the benzene ring forms a dihedral angle of 40.60 (5)° with the imidizolium ring. The nitro-benzoate anion is approximately planar: the benzene ring makes dihedral angles of 3.8 (3) and 3.2 (1)° with the nitro and carboxyl-ate groups, respectively. In the crystal structure, the cations and anions are linked by inter-molecular N-H⋯O hydrogen bonds, forming a zigzag chain along the b axis.

Entities:  

Year:  2009        PMID: 21583857      PMCID: PMC2977721          DOI: 10.1107/S1600536809013142

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the physical and biological properties of imidazoles, see: Bunnage & Owen (2008 ▶); Ganellin & Fkyerat (1996 ▶); Weinreb (2007 ▶). For related structures of salts of imidazole with carboxylic acid derivatives, see: Mcdonald & Dorrestein (2001 ▶).

Experimental

Crystal data

C3H5N2 +·C7H4NO4 M = 235.20 Monoclinic, a = 12.209 (2) Å b = 12.081 (2) Å c = 7.3216 (15) Å β = 106.38 (3)° V = 1036.1 (3) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 298 K 0.38 × 0.21 × 0.13 mm

Data collection

Rigaku R-AXIS RAPID IP area-detector diffractometer Absorption correction: multi-scan (; Higashi, 1995 ▶) T min = 0.956, T max = 0.984 10057 measured reflections 2369 independent reflections 1571 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.108 S = 1.02 2369 reflections 163 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.17 e Å−3 Data collection: RAPID-AUTO (Rigaku/MSC, 2004 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809013142/is2403sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809013142/is2403Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C3H5N2+·C7H4NO4F(000) = 488
Mr = 235.20Dx = 1.508 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6213 reflections
a = 12.209 (2) Åθ = 3.4–27.5°
b = 12.081 (2) ŵ = 0.12 mm1
c = 7.3216 (15) ÅT = 298 K
β = 106.38 (3)°Block, colourless
V = 1036.1 (3) Å30.38 × 0.21 × 0.13 mm
Z = 4
Rigaku R-AXIS RAPID IP area-detector diffractometer2369 independent reflections
Radiation source: rotating anode1571 reflections with I > 2σ(I)
graphiteRint = 0.051
ω scansθmax = 27.5°, θmin = 3.4°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −15→14
Tmin = 0.956, Tmax = 0.984k = −15→15
10057 measured reflectionsl = −9→9
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.108w = 1/[σ2(Fo2) + (0.0443P)2 + 0.1735P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2369 reflectionsΔρmax = 0.20 e Å3
163 parametersΔρmin = −0.17 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.019 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.25763 (13)0.52628 (15)0.1825 (3)0.0382 (4)
C20.35926 (13)0.45955 (14)0.1673 (2)0.0337 (4)
C30.34637 (15)0.36098 (15)0.0674 (3)0.0409 (4)
H3A0.27330.33480.00820.049*
C40.44008 (17)0.30055 (16)0.0538 (3)0.0470 (5)
H4A0.42940.2345−0.01420.056*
C50.54890 (16)0.33750 (16)0.1401 (3)0.0463 (5)
H5A0.61250.29710.13320.056*
C60.56048 (14)0.43670 (15)0.2374 (2)0.0373 (4)
C70.46907 (13)0.49843 (14)0.2524 (2)0.0352 (4)
H7A0.48040.56520.31830.042*
C80.05956 (14)0.80035 (16)0.3479 (3)0.0417 (4)
H80.10480.86240.34900.050*
C90.00096 (16)0.63117 (17)0.3339 (3)0.0509 (5)
H9−0.00090.55450.32270.061*
C10−0.08242 (16)0.69552 (17)0.3607 (3)0.0485 (5)
H10−0.15280.67210.37190.058*
N10.67578 (12)0.48134 (15)0.3229 (2)0.0460 (4)
H10.160 (2)0.670 (2)0.304 (3)0.084 (8)*
H2−0.0847 (18)0.865 (2)0.384 (3)0.066 (6)*
N2−0.04454 (13)0.80152 (14)0.3686 (2)0.0432 (4)
N30.08885 (12)0.69827 (13)0.3259 (2)0.0423 (4)
O10.16009 (9)0.48714 (11)0.1101 (2)0.0507 (4)
O20.27753 (10)0.61707 (11)0.2665 (2)0.0510 (4)
O30.68555 (10)0.56865 (13)0.4101 (2)0.0574 (4)
O40.75732 (11)0.42975 (14)0.3012 (2)0.0721 (5)
U11U22U33U12U13U23
C10.0339 (8)0.0330 (10)0.0495 (11)−0.0009 (7)0.0148 (8)0.0051 (8)
C20.0350 (8)0.0296 (9)0.0380 (9)0.0006 (7)0.0129 (7)0.0043 (7)
C30.0442 (9)0.0352 (10)0.0444 (10)−0.0038 (8)0.0143 (8)0.0009 (8)
C40.0624 (12)0.0311 (10)0.0527 (11)0.0026 (8)0.0246 (10)−0.0023 (9)
C50.0506 (11)0.0402 (11)0.0548 (12)0.0155 (8)0.0256 (9)0.0076 (9)
C60.0340 (8)0.0392 (10)0.0406 (10)0.0064 (7)0.0139 (7)0.0082 (8)
C70.0363 (8)0.0310 (9)0.0411 (9)0.0023 (7)0.0157 (8)0.0010 (7)
N10.0340 (8)0.0561 (11)0.0499 (10)0.0087 (7)0.0152 (7)0.0108 (8)
O10.0309 (6)0.0412 (8)0.0769 (10)−0.0044 (5)0.0100 (6)−0.0008 (7)
O20.0354 (6)0.0370 (8)0.0836 (10)−0.0003 (5)0.0215 (7)−0.0128 (7)
O30.0398 (7)0.0578 (10)0.0742 (10)−0.0063 (6)0.0154 (7)−0.0032 (8)
O40.0378 (7)0.0952 (14)0.0870 (12)0.0218 (8)0.0234 (8)−0.0012 (10)
C80.0346 (9)0.0400 (11)0.0514 (11)−0.0031 (7)0.0137 (8)−0.0015 (9)
C90.0518 (11)0.0373 (11)0.0667 (13)−0.0075 (9)0.0221 (10)−0.0067 (10)
C100.0375 (9)0.0534 (13)0.0583 (12)−0.0082 (8)0.0194 (9)−0.0060 (10)
N20.0373 (8)0.0435 (10)0.0500 (9)0.0054 (7)0.0144 (7)−0.0031 (7)
N30.0352 (8)0.0413 (9)0.0523 (9)0.0039 (7)0.0153 (7)−0.0048 (7)
C8—N31.307 (2)C2—C31.383 (2)
C8—N21.322 (2)C2—C71.391 (2)
C8—H80.9300C3—C41.384 (3)
C9—C101.339 (3)C3—H3A0.9300
C9—N31.359 (2)C4—C51.375 (3)
C9—H90.9300C4—H4A0.9300
C10—N21.357 (2)C5—C61.381 (2)
C10—H100.9300C5—H5A0.9300
N2—H20.94 (2)C6—C71.372 (2)
N3—H10.99 (2)C6—N11.472 (2)
C1—O21.247 (2)C7—H7A0.9300
C1—O11.252 (2)N1—O31.221 (2)
C1—C21.510 (2)N1—O41.2223 (19)
N3—C8—N2109.25 (16)C7—C2—C1119.68 (15)
N3—C8—H8125.4C2—C3—C4121.27 (17)
N2—C8—H8125.4C2—C3—H3A119.4
C10—C9—N3107.59 (17)C4—C3—H3A119.4
C10—C9—H9126.2C5—C4—C3120.45 (18)
N3—C9—H9126.2C5—C4—H4A119.8
C9—C10—N2106.85 (16)C3—C4—H4A119.8
C9—C10—H10126.6C4—C5—C6117.64 (16)
N2—C10—H10126.6C4—C5—H5A121.2
C8—N2—C10108.20 (16)C6—C5—H5A121.2
C8—N2—H2125.1 (14)C7—C6—C5123.07 (17)
C10—N2—H2126.7 (14)C7—C6—N1117.95 (16)
C8—N3—C9108.11 (15)C5—C6—N1118.93 (15)
C8—N3—H1128.8 (14)C6—C7—C2118.93 (16)
C9—N3—H1123.1 (14)C6—C7—H7A120.5
O2—C1—O1124.82 (16)C2—C7—H7A120.5
O2—C1—C2117.12 (14)O3—N1—O4123.05 (17)
O1—C1—C2118.06 (16)O3—N1—C6118.65 (14)
C3—C2—C7118.62 (15)O4—N1—C6118.29 (17)
C3—C2—C1121.69 (15)
N3—C9—C10—N20.1 (2)C3—C4—C5—C6−0.8 (3)
N3—C8—N2—C100.5 (2)C4—C5—C6—C70.5 (3)
C9—C10—N2—C8−0.4 (2)C4—C5—C6—N1−176.88 (16)
N2—C8—N3—C9−0.4 (2)C5—C6—C7—C20.5 (3)
C10—C9—N3—C80.2 (2)N1—C6—C7—C2177.96 (14)
O2—C1—C2—C3−176.11 (16)C3—C2—C7—C6−1.3 (2)
O1—C1—C2—C33.7 (3)C1—C2—C7—C6179.92 (15)
O2—C1—C2—C72.6 (2)C7—C6—N1—O33.0 (2)
O1—C1—C2—C7−177.59 (16)C5—C6—N1—O3−179.45 (16)
C7—C2—C3—C41.0 (3)C7—C6—N1—O4−176.07 (16)
C1—C2—C3—C4179.79 (16)C5—C6—N1—O41.5 (2)
C2—C3—C4—C50.0 (3)
D—H···AD—HH···AD···AD—H···A
N3—H1···O20.99 (2)1.66 (2)2.6502 (18)177 (2)
N2—H2···O1i0.94 (2)1.74 (2)2.677 (2)175 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H1⋯O20.99 (2)1.66 (2)2.6502 (18)177 (2)
N2—H2⋯O1i0.94 (2)1.74 (2)2.677 (2)175 (2)

Symmetry code: (i) .

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