Literature DB >> 21583850

4,4,5,5-Tetra-methyl-2-[4-(2-pyrid-yl)phen-yl]-3,4-dihydro-imidazole-1-oxyl-3-oxide.

Xiang-Yang Qin1, Ping-An Wang, Xiao-Li Sun.   

Abstract

In the title compound, C(18)H(20)N(3)O(2), the pyridine and phenyl rings are coplanar [dihedral angle = 3.5 (3)°]. The phenyl ring makes a dihedral angle of 29.6 (1)° with the imidazole ring. The crystal structure is stabilized by inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21583850      PMCID: PMC2977714          DOI: 10.1107/S1600536809013221

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the preparation of the title compound see: Ullman et al. (1974 ▶). For recent synthetic use of the title compound and its derivatives, see: Li et al. (2009 ▶); Xu et al. (2008 ▶); Masuda et al. (2009 ▶); Train et al. (2009 ▶).

Experimental

Crystal data

C18H20N3O2 M = 310.37 Monoclinic, a = 8.5150 (17) Å b = 22.286 (5) Å c = 9.1360 (18) Å β = 109.45 (3)° V = 1634.8 (6) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.983, T max = 0.983 12953 measured reflections 2819 independent reflections 1896 reflections with I > 2σ(I) R int = 0.063

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.146 S = 1.09 2819 reflections 212 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: Mercury (Macrae et al., 2006 ▶) and CAMERON (Watkin et al., 1996 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809013221/bt2927sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809013221/bt2927Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H20N3O2F(000) = 660
Mr = 310.37Dx = 1.261 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 8.5150 (17) ÅCell parameters from 2819 reflections
b = 22.286 (5) Åθ = 3.0–25.0°
c = 9.1360 (18) ŵ = 0.08 mm1
β = 109.45 (3)°T = 293 K
V = 1634.8 (6) Å3Block, blue
Z = 40.20 × 0.20 × 0.20 mm
Bruker SMART APEX CCD diffractometer2819 independent reflections
Radiation source: fine-focus sealed tube1896 reflections with I > 2σ(I)
graphiteRint = 0.063
Detector resolution: 0 pixels mm-1θmax = 25.0°, θmin = 3.0°
ω scansh = −10→10
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −26→26
Tmin = 0.983, Tmax = 0.983l = −10→10
12953 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.070Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.146H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0512P)2 + 0.5834P] where P = (Fo2 + 2Fc2)/3
2819 reflections(Δ/σ)max < 0.001
212 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.0559 (3)0.57868 (12)0.7773 (3)0.0406 (7)
C20.3900 (3)0.72221 (12)0.7712 (3)0.0370 (6)
C40.3958 (3)0.66754 (12)0.6990 (3)0.0432 (7)
H40.47310.66200.64830.052*
C50.5033 (3)0.77122 (11)0.7688 (3)0.0377 (6)
C60.2755 (3)0.72855 (12)0.8480 (3)0.0469 (7)
H60.26950.76460.89720.056*
C70.1736 (3)0.62798 (11)0.7782 (3)0.0365 (6)
C80.2889 (3)0.62182 (12)0.7019 (3)0.0440 (7)
H80.29390.58590.65160.053*
C90.1706 (3)0.68223 (12)0.8522 (3)0.0482 (8)
H90.09590.68730.90580.058*
C100.7488 (3)0.82333 (12)0.7781 (3)0.0422 (7)
C110.6108 (3)0.86972 (12)0.7722 (3)0.0412 (7)
C12−0.1592 (4)0.48645 (15)0.7597 (4)0.0699 (10)
H12−0.22670.45330.75610.084*
C130.8852 (4)0.81846 (14)0.9347 (4)0.0612 (9)
H13A0.83620.81201.01400.092*
H13B0.94900.85490.95580.092*
H13C0.95690.78540.93330.092*
C140.8263 (4)0.82919 (15)0.6510 (4)0.0671 (10)
H14A0.90770.79810.66280.101*
H14B0.87890.86770.65850.101*
H14C0.74110.82540.55140.101*
C15−0.0669 (5)0.58456 (16)0.8416 (5)0.0849 (13)
H15−0.07730.62010.89080.102*
C160.6523 (4)0.91381 (15)0.9054 (4)0.0726 (11)
H16A0.55760.93900.89450.109*
H16B0.74500.93820.90450.109*
H16C0.68080.89231.00170.109*
C180.5432 (4)0.90355 (16)0.6188 (4)0.0720 (10)
H18A0.51570.87550.53430.108*
H18B0.62620.93100.60940.108*
H18C0.44520.92540.61610.108*
C19−0.0414 (4)0.48541 (14)0.6919 (4)0.0678 (10)
H19−0.03510.45140.63520.081*
C20−0.1762 (6)0.53756 (18)0.8335 (6)0.1057 (16)
H20−0.25950.54100.87790.127*
N10.6539 (3)0.76539 (10)0.7555 (3)0.0437 (6)
N20.4734 (3)0.82976 (10)0.7821 (3)0.0455 (6)
N30.0669 (3)0.52930 (11)0.6995 (3)0.0597 (7)
O10.7257 (3)0.71598 (9)0.7424 (3)0.0689 (7)
O20.3395 (3)0.85231 (9)0.7914 (3)0.0739 (7)
U11U22U33U12U13U23
C10.0425 (16)0.0374 (17)0.0416 (17)0.0011 (12)0.0136 (14)0.0010 (13)
C20.0350 (15)0.0354 (16)0.0390 (16)0.0010 (12)0.0101 (13)0.0015 (12)
C40.0427 (16)0.0451 (18)0.0463 (18)−0.0018 (13)0.0209 (14)−0.0052 (13)
C50.0364 (15)0.0377 (17)0.0398 (17)0.0032 (12)0.0139 (13)−0.0007 (12)
C60.0516 (18)0.0376 (17)0.0558 (19)−0.0034 (14)0.0236 (16)−0.0099 (14)
C70.0369 (15)0.0352 (16)0.0352 (16)−0.0006 (11)0.0089 (13)0.0004 (12)
C80.0514 (18)0.0369 (16)0.0439 (18)−0.0014 (14)0.0162 (15)−0.0075 (13)
C90.0455 (17)0.0437 (18)0.063 (2)−0.0035 (13)0.0289 (16)−0.0064 (14)
C100.0409 (16)0.0403 (16)0.0478 (18)−0.0064 (12)0.0180 (14)−0.0031 (13)
C110.0434 (16)0.0317 (15)0.0478 (18)−0.0064 (12)0.0141 (14)−0.0004 (13)
C120.076 (2)0.049 (2)0.096 (3)−0.0207 (18)0.044 (2)−0.0010 (19)
C130.0499 (18)0.063 (2)0.063 (2)−0.0012 (15)0.0082 (17)0.0014 (17)
C140.086 (3)0.065 (2)0.068 (2)−0.0102 (18)0.049 (2)−0.0028 (17)
C150.117 (3)0.056 (2)0.119 (3)−0.034 (2)0.090 (3)−0.033 (2)
C160.059 (2)0.067 (2)0.089 (3)−0.0061 (17)0.021 (2)−0.036 (2)
C180.068 (2)0.067 (2)0.081 (3)0.0073 (18)0.025 (2)0.0286 (19)
C190.065 (2)0.0379 (19)0.106 (3)−0.0094 (16)0.036 (2)−0.0121 (18)
C200.138 (4)0.079 (3)0.147 (4)−0.049 (3)0.110 (4)−0.036 (3)
N10.0433 (14)0.0372 (14)0.0532 (16)−0.0005 (11)0.0194 (12)−0.0037 (11)
N20.0397 (14)0.0350 (14)0.0647 (17)0.0016 (11)0.0212 (12)0.0003 (11)
N30.0569 (17)0.0402 (16)0.090 (2)−0.0082 (12)0.0358 (15)−0.0159 (13)
O10.0569 (14)0.0418 (13)0.121 (2)0.0004 (10)0.0471 (14)−0.0134 (12)
O20.0542 (14)0.0416 (13)0.139 (2)0.0080 (11)0.0504 (14)0.0038 (12)
C1—N31.331 (3)C12—C191.343 (4)
C1—C151.365 (4)C12—C201.356 (5)
C1—C71.486 (4)C12—H120.9300
C2—C61.385 (3)C13—H13A0.9600
C2—C41.394 (4)C13—H13B0.9600
C2—C51.463 (4)C13—H13C0.9600
C4—C81.373 (4)C14—H14A0.9600
C4—H40.9300C14—H14B0.9600
C5—N11.334 (3)C14—H14C0.9600
C5—N21.343 (3)C15—C201.387 (5)
C6—C91.374 (4)C15—H150.9300
C6—H60.9300C16—H16A0.9600
C7—C81.388 (4)C16—H16B0.9600
C7—C91.389 (4)C16—H16C0.9600
C8—H80.9300C18—H18A0.9600
C9—H90.9300C18—H18B0.9600
C10—N11.501 (3)C18—H18C0.9600
C10—C131.517 (4)C19—N31.331 (4)
C10—C141.520 (4)C19—H190.9300
C10—C111.552 (4)C20—H200.9300
C11—N21.497 (3)N1—O11.284 (3)
C11—C161.512 (4)N2—O21.274 (3)
C11—C181.525 (4)
N3—C1—C15120.7 (3)C10—C13—H13B109.5
N3—C1—C7116.5 (2)H13A—C13—H13B109.5
C15—C1—C7122.6 (3)C10—C13—H13C109.5
C6—C2—C4118.1 (2)H13A—C13—H13C109.5
C6—C2—C5120.7 (2)H13B—C13—H13C109.5
C4—C2—C5121.2 (2)C10—C14—H14A109.5
C8—C4—C2120.8 (3)C10—C14—H14B109.5
C8—C4—H4119.6H14A—C14—H14B109.5
C2—C4—H4119.6C10—C14—H14C109.5
N1—C5—N2108.7 (2)H14A—C14—H14C109.5
N1—C5—C2126.0 (2)H14B—C14—H14C109.5
N2—C5—C2125.3 (2)C1—C15—C20120.1 (3)
C9—C6—C2120.8 (3)C1—C15—H15120.0
C9—C6—H6119.6C20—C15—H15120.0
C2—C6—H6119.6C11—C16—H16A109.5
C8—C7—C9117.5 (2)C11—C16—H16B109.5
C8—C7—C1120.9 (2)H16A—C16—H16B109.5
C9—C7—C1121.6 (2)C11—C16—H16C109.5
C4—C8—C7121.4 (2)H16A—C16—H16C109.5
C4—C8—H8119.3H16B—C16—H16C109.5
C7—C8—H8119.3C11—C18—H18A109.5
C6—C9—C7121.5 (3)C11—C18—H18B109.5
C6—C9—H9119.3H18A—C18—H18B109.5
C7—C9—H9119.3C11—C18—H18C109.5
N1—C10—C13106.1 (2)H18A—C18—H18C109.5
N1—C10—C14108.6 (2)H18B—C18—H18C109.5
C13—C10—C14109.6 (2)N3—C19—C12125.1 (3)
N1—C10—C11101.6 (2)N3—C19—H19117.5
C13—C10—C11114.5 (2)C12—C19—H19117.5
C14—C10—C11115.6 (2)C12—C20—C15118.7 (3)
N2—C11—C16108.4 (2)C12—C20—H20120.7
N2—C11—C18106.6 (2)C15—C20—H20120.7
C16—C11—C18109.5 (3)O1—N1—C5126.4 (2)
N2—C11—C10101.5 (2)O1—N1—C10120.0 (2)
C16—C11—C10115.7 (2)C5—N1—C10113.2 (2)
C18—C11—C10114.3 (2)O2—N2—C5126.2 (2)
C19—C12—C20117.6 (3)O2—N2—C11120.3 (2)
C19—C12—H12121.2C5—N2—C11113.4 (2)
C20—C12—H12121.2C19—N3—C1117.7 (3)
C10—C13—H13A109.5
C6—C2—C4—C81.1 (4)C7—C1—C15—C20178.2 (4)
C5—C2—C4—C8−180.0 (2)C20—C12—C19—N34.3 (6)
C6—C2—C5—N1152.3 (3)C19—C12—C20—C15−3.0 (7)
C4—C2—C5—N1−26.6 (4)C1—C15—C20—C12−0.7 (7)
C6—C2—C5—N2−26.5 (4)N2—C5—N1—O1179.1 (2)
C4—C2—C5—N2154.6 (3)C2—C5—N1—O10.1 (4)
C4—C2—C6—C9−0.1 (4)N2—C5—N1—C106.8 (3)
C5—C2—C6—C9−179.1 (3)C2—C5—N1—C10−172.3 (2)
N3—C1—C7—C8−0.4 (4)C13—C10—N1—O1−65.1 (3)
C15—C1—C7—C8−175.3 (3)C14—C10—N1—O152.6 (3)
N3—C1—C7—C9178.3 (3)C11—C10—N1—O1175.0 (2)
C15—C1—C7—C93.4 (4)C13—C10—N1—C5107.8 (3)
C2—C4—C8—C7−1.0 (4)C14—C10—N1—C5−134.5 (3)
C9—C7—C8—C4−0.2 (4)C11—C10—N1—C5−12.1 (3)
C1—C7—C8—C4178.5 (3)N1—C5—N2—O2177.4 (3)
C2—C6—C9—C7−1.0 (4)C2—C5—N2—O2−3.6 (4)
C8—C7—C9—C61.1 (4)N1—C5—N2—C112.2 (3)
C1—C7—C9—C6−177.5 (3)C2—C5—N2—C11−178.8 (2)
N1—C10—C11—N211.7 (2)C16—C11—N2—O252.8 (3)
C13—C10—C11—N2−102.1 (2)C18—C11—N2—O2−65.0 (3)
C14—C10—C11—N2129.1 (2)C10—C11—N2—O2175.1 (2)
N1—C10—C11—C16128.8 (3)C16—C11—N2—C5−131.6 (3)
C13—C10—C11—C1615.0 (4)C18—C11—N2—C5110.5 (3)
C14—C10—C11—C16−113.7 (3)C10—C11—N2—C5−9.4 (3)
N1—C10—C11—C18−102.6 (3)C12—C19—N3—C1−1.6 (5)
C13—C10—C11—C18143.6 (3)C15—C1—N3—C19−2.5 (5)
C14—C10—C11—C1814.8 (3)C7—C1—N3—C19−177.5 (3)
N3—C1—C15—C203.5 (6)
D—H···AD—HH···AD···AD—H···A
C12—H12···O2i0.932.433.322 (4)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C12—H12⋯O2i0.932.433.322 (4)161

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

  2 in total
  2 in total

1.  4,4,5,5-Tetra-methyl-2-(3,4,5-trimethoxy-phen-yl)imidazolidine-1-oxyl 3-oxide.

Authors:  Hai-Bo Wang; Lin-Lin Jing; Peng Gao; Xiao-Li Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-08

2.  2-(1H-Indol-3-yl)-4,4,5,5-tetra-methyl-imidazolidine-1-oxyl 3-oxide.

Authors:  Hai-Bo Wang; Lin-Lin Jing; Ru Jiang; Peng Liu; Xiao-Li Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-23
  2 in total

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