Literature DB >> 21583810

Bis(2,6-diamino-3,5-dibromo-pyridinium) hexa-bromidostannate(IV).

Rawhi H Al-Far, Salim F Haddad, Basem Fares Ali.   

Abstract

The asymmetric unit of the title compound, (C(5)H(6)Br(2)N(3))(2)[SnBr(6)], contains one cation and one half-anion in which the Sn atom is located on a crystallographic centre of inversion and is in a quasi-octa-hedral geometry. The crystal structure is assembled via hydrogen-bonding inter-actions of two kinds, N(pyridine/amine)-H⋯Br-Sn, along with C-Br⋯Br-Sn interactions [3.4925 (19) Å]. The cations are involved in π-π stacking, which adds an extra supra-molecularity as it presents a strong case of offset-face-to-face motifs [centroid-centroid distance = 3.577 (3) Å]. The inter-molecular hydrogen bonds, short Br⋯Br inter-actions and π-π stacking result in the formation of a three-dimensional supra-molecular architecture.

Entities:  

Year:  2009        PMID: 21583810      PMCID: PMC2977624          DOI: 10.1107/S1600536809015189

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to hybrid organic–inorganic compounds, see: Aruta et al. (2005 ▶); Hill (1998 ▶); Kagan et al. (1999 ▶); Knutson et al. (2005 ▶); Raptopoulou et al. (2002 ▶). For related structures, see: Al-Far & Ali (2007 ▶); Al-Far, Ali & Al-Sou’od (2007 ▶); Ali & Al-Far (2007 ▶); Ali et al. (2008 ▶); Ali, Al-Far & Ng (2007 ▶); Awwadi et al. (2007 ▶); Tudela & Khan (1991 ▶); Willey et al. (1998 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

(C5H6Br2N3)2[SnBr6] M = 1133.97 Monoclinic, a = 8.3696 (14) Å b = 16.720 (2) Å c = 9.5814 (15) Å β = 112.556 (12)° V = 1238.3 (3) Å3 Z = 2 Mo Kα radiation μ = 17.18 mm−1 T = 295 K 0.30 × 0.30 × 0.20 mm

Data collection

Bruker P4 diffractometer Absorption correction: ψ scan (XSCANS; Bruker, 1996 ▶) T min = 0.007, T max = 0.035 2825 measured reflections 2162 independent reflections 1437 reflections with I > 2σ(I) R int = 0.078 3 standard reflections every 97 reflections intensity decay: 0.01%

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.146 S = 1.00 2162 reflections 124 parameters H-atom parameters constrained Δρmax = 0.97 e Å−3 Δρmin = −1.63 e Å−3 Data collection: XSCANS (Bruker, 1996 ▶); cell refinement: XSCANS; data reduction: SHELXTL (Sheldrick, 2008 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809015189/hk2669sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809015189/hk2669Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C5H6Br2N3)2[SnBr6]F(000) = 1028
Mr = 1133.97Dx = 3.042 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 29 reflections
a = 8.3696 (14) Åθ = 5.7–12.5°
b = 16.720 (2) ŵ = 17.18 mm1
c = 9.5814 (15) ÅT = 295 K
β = 112.556 (12)°Parallelepiped, yellow
V = 1238.3 (3) Å30.30 × 0.30 × 0.20 mm
Z = 2
Bruker P4 diffractometer1437 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.078
graphiteθmax = 25.0°, θmin = 2.4°
ω scansh = −9→1
Absorption correction: ψ scan (XSCANS; Bruker, 1996)k = −19→1
Tmin = 0.008, Tmax = 0.035l = −10→11
2825 measured reflections3 standard reflections every 97 reflections
2162 independent reflections intensity decay: 0.01%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.146H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0766P)2] where P = (Fo2 + 2Fc2)/3
2162 reflections(Δ/σ)max < 0.001
124 parametersΔρmax = 0.97 e Å3
0 restraintsΔρmin = −1.62 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Sn11.00000.50000.50000.0284 (3)
Br11.06913 (19)0.61962 (8)0.68737 (17)0.0445 (4)
Br21.03622 (19)0.59582 (8)0.30353 (17)0.0447 (4)
Br30.66959 (17)0.53289 (8)0.39554 (18)0.0423 (4)
Br40.7063 (2)0.32003 (9)−0.12875 (19)0.0510 (5)
Br50.2397 (2)0.45315 (8)0.10813 (18)0.0483 (4)
N10.3496 (13)0.2261 (5)0.0181 (12)0.032 (3)
H10.31480.17890.02810.039*
N20.5374 (16)0.1644 (6)−0.0743 (13)0.047 (3)
H2A0.62000.1663−0.10660.056*
H2B0.49400.1190−0.06500.056*
N30.1518 (14)0.2743 (6)0.1119 (13)0.044 (3)
H3A0.12110.22590.11910.053*
H3B0.10290.31340.13860.053*
C10.4759 (17)0.2325 (7)−0.0381 (15)0.034 (3)
C20.5364 (17)0.3061 (7)−0.0492 (17)0.036 (3)
C30.4653 (17)0.3720 (8)−0.0099 (15)0.040 (4)
H30.50470.4227−0.02120.048*
C40.3354 (18)0.3649 (7)0.0466 (15)0.034 (3)
C50.2745 (17)0.2888 (8)0.0595 (15)0.039 (3)
U11U22U33U12U13U23
Sn10.0293 (7)0.0234 (6)0.0365 (8)0.0000 (5)0.0169 (6)−0.0002 (5)
Br10.0485 (9)0.0374 (7)0.0537 (10)−0.0074 (7)0.0264 (8)−0.0159 (7)
Br20.0494 (9)0.0430 (8)0.0499 (10)−0.0016 (7)0.0279 (8)0.0093 (7)
Br30.0271 (7)0.0319 (7)0.0677 (10)0.0009 (6)0.0180 (7)−0.0014 (7)
Br40.0472 (9)0.0493 (9)0.0706 (11)−0.0030 (8)0.0381 (9)−0.0045 (8)
Br50.0480 (9)0.0333 (7)0.0680 (11)0.0059 (7)0.0272 (9)−0.0091 (7)
N10.037 (6)0.018 (5)0.055 (8)−0.003 (5)0.032 (6)−0.002 (5)
N20.061 (9)0.029 (6)0.059 (8)0.003 (6)0.032 (7)−0.011 (6)
N30.042 (7)0.035 (6)0.069 (9)−0.014 (6)0.037 (7)−0.017 (6)
C10.035 (8)0.024 (6)0.042 (9)0.007 (6)0.012 (7)−0.002 (6)
C20.037 (8)0.016 (6)0.063 (9)0.004 (6)0.028 (7)0.001 (6)
C30.038 (9)0.032 (7)0.048 (9)−0.018 (7)0.015 (8)0.007 (6)
C40.049 (9)0.017 (6)0.034 (8)−0.002 (6)0.013 (7)−0.004 (5)
C50.032 (8)0.046 (8)0.030 (8)−0.003 (7)0.004 (6)−0.012 (6)
Sn1—Br12.6002 (13)N3—H3A0.8600
Sn1—Br1i2.6002 (13)N3—H3B0.8600
Sn1—Br22.5768 (14)C1—N11.362 (16)
Sn1—Br2i2.5768 (14)C1—N21.349 (15)
Sn1—Br32.6131 (14)C1—C21.350 (17)
Sn1—Br3i2.6131 (14)C2—Br41.868 (12)
N1—C51.357 (15)C2—C31.372 (18)
N1—H10.8600C3—C41.392 (18)
N2—H2A0.8600C3—H30.9300
N2—H2B0.8600C4—Br51.878 (12)
N3—C51.328 (16)C4—C51.394 (18)
Br1—Sn1—Br1i180.0H2A—N2—H2B120.0
Br1i—Sn1—Br388.56 (5)C5—N3—H3A120.0
Br1—Sn1—Br3i88.56 (5)C5—N3—H3B120.0
Br1—Sn1—Br391.44 (5)H3A—N3—H3B120.0
Br1i—Sn1—Br3i91.44 (5)N2—C1—C2123.9 (12)
Br2—Sn1—Br188.21 (5)N2—C1—N1117.8 (11)
Br2i—Sn1—Br1i88.21 (5)C2—C1—N1118.3 (10)
Br2i—Sn1—Br191.79 (5)C1—C2—Br4120.9 (9)
Br2—Sn1—Br1i91.79 (5)C1—C2—C3119.7 (11)
Br2i—Sn1—Br2180.0C3—C2—Br4119.3 (9)
Br2—Sn1—Br389.60 (5)C2—C3—C4121.6 (11)
Br2i—Sn1—Br3i89.61 (5)C2—C3—H3119.2
Br2i—Sn1—Br390.39 (5)C4—C3—H3119.2
Br2—Sn1—Br3i90.39 (5)C3—C4—Br5123.1 (9)
Br3i—Sn1—Br3180.0C3—C4—C5118.6 (11)
C1—N1—H1117.6C5—C4—Br5118.3 (10)
C5—N1—C1124.9 (10)N1—C5—C4116.9 (12)
C5—N1—H1117.6N3—C5—N1118.8 (12)
C1—N2—H2A120.0N3—C5—C4124.2 (12)
C1—N2—H2B120.0
N2—C1—N1—C5−179.9 (12)C2—C3—C4—C5−2(2)
C2—C1—N1—C52(2)C2—C3—C4—Br5177.8 (11)
N2—C1—C2—C3179.9 (14)C1—N1—C5—N3179.6 (13)
N1—C1—C2—C3−3(2)C1—N1—C5—C4−2(2)
N2—C1—C2—Br44(2)C3—C4—C5—N3179.8 (13)
N1—C1—C2—Br4−178.7 (10)Br5—C4—C5—N30.4 (19)
C1—C2—C3—C42(2)C3—C4—C5—N11.2 (19)
Br4—C2—C3—C4178.5 (11)Br5—C4—C5—N1−178.2 (9)
D—H···AD—HH···AD···AD—H···A
N1—H1···Br3ii0.862.543.354 (9)159
N2—H2B···Br3ii0.862.883.612 (12)144
N3—H3A···Br2ii0.862.793.608 (10)160
N3—H3B···Br1iii0.862.823.604 (10)153
Table 1

Selected geometric parameters (Å, °)

Sn1—Br12.6002 (13)
Sn1—Br22.5768 (14)
Sn1—Br32.6131 (14)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯Br3ii0.862.543.354 (9)159
N2—H2B⋯Br3ii0.862.883.612 (12)144
N3—H3A⋯Br2ii0.862.793.608 (10)160
N3—H3B⋯Br1iii0.862.823.604 (10)153

Symmetry codes: (ii) ; (iii) .

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