Literature DB >> 21583793

Imidazolium trans-bis-(imino-diacetato-κO,N,O')cobaltate(III).

Xiao-Li Gao1, Li-Ping Lu, Miao-Li Zhu.   

Abstract

In the title compound, (C(3)H(5)N(2))[Co(C(4)H(5)NO(4))(2)], the cation and anion are located on a twofold rotation axis and inversion center, respectively. Inter-molecular N-H⋯O hydrogen bonds link the cations and anions into layers parallel to the ab plane. The crystal packing also exhibits weak C-H⋯O hydrogen bonds, including bifurcated hydrogen bonds, and C=O⋯π inter-actions.

Entities:  

Year:  2009        PMID: 21583793      PMCID: PMC2977607          DOI: 10.1107/S1600536809014342

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For hydrogen bonds in related compounds containing imidazolium, see: Allen (2002 ▶); Chattopadhyay et al. (1995 ▶); Gao et al. (2009 ▶); Hsu & Schlemper (1980 ▶); Rissanen & Pursiainen (2000 ▶). Bifurcated hydrogen bonds were discussed by Jeffrey et al. (1985 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

(C3H5N2)[Co(C4H5NO4)2] M = 390.20 Orthorhombic, a = 16.889 (3) Å b = 5.2906 (10) Å c = 16.901 (3) Å V = 1510.2 (5) Å3 Z = 4 Mo Kα radiation μ = 1.19 mm−1 T = 298 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2000 ▶) T min = 0.783, T max = 0.797 6218 measured reflections 1495 independent reflections 1299 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.079 S = 1.08 1495 reflections 111 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.27 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL/PC. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809014342/cv2551sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809014342/cv2551Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C3H5N2)[Co(C4H5NO4)2]F(000) = 800
Mr = 390.20Dx = 1.716 Mg m3
Orthorhombic, PccaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2a 2acCell parameters from 2958 reflections
a = 16.889 (3) Åθ = 2.4–27.0°
b = 5.2906 (10) ŵ = 1.19 mm1
c = 16.901 (3) ÅT = 298 K
V = 1510.2 (5) Å3Block, red
Z = 40.20 × 0.20 × 0.20 mm
Bruker SMART CCD area-detector diffractometer1495 independent reflections
Radiation source: fine-focus sealed tube1299 reflections with I > 2σ(I)
graphiteRint = 0.025
ω scansθmax = 26.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 2000)h = −19→20
Tmin = 0.783, Tmax = 0.797k = −6→4
6218 measured reflectionsl = −18→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.079H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0405P)2 + 0.6086P] where P = (Fo2 + 2Fc2)/3
1495 reflections(Δ/σ)max < 0.001
111 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.00001.00000.00000.02108 (14)
O1−0.06498 (8)1.0888 (2)0.08656 (8)0.0305 (3)
O2−0.10143 (10)0.9556 (3)0.20572 (10)0.0502 (5)
O30.07296 (7)1.2495 (2)0.03073 (9)0.0306 (3)
O40.17666 (11)1.3151 (3)0.10704 (14)0.0775 (7)
N10.05329 (8)0.7739 (3)0.07205 (9)0.0240 (3)
H10.06440.64400.05210.029*
C1−0.06105 (12)0.9354 (4)0.14545 (12)0.0319 (4)
C2−0.00355 (11)0.7182 (4)0.13637 (12)0.0315 (5)
H2A0.02490.69260.18560.038*
H2B−0.03240.56440.12420.038*
C30.12727 (11)0.8972 (4)0.09931 (13)0.0327 (4)
H3A0.17240.81610.07440.039*
H3B0.13240.87640.15610.039*
C40.12754 (12)1.1751 (4)0.07933 (13)0.0369 (5)
N20.20741 (11)0.3528 (4)0.31139 (13)0.0526 (5)
H20.17490.23890.29520.063*
C50.25000.50000.2661 (2)0.0461 (9)
H50.25000.50000.21100.055*
C60.22287 (19)0.4090 (8)0.38741 (18)0.0811 (11)
H60.19990.33460.43170.097*
U11U22U33U12U13U23
Co10.0249 (2)0.0181 (2)0.0202 (2)0.00274 (13)−0.00159 (13)−0.00175 (12)
O10.0359 (7)0.0297 (7)0.0259 (7)0.0101 (6)0.0047 (6)−0.0001 (6)
O20.0550 (10)0.0629 (11)0.0325 (9)0.0263 (8)0.0165 (8)0.0112 (8)
O30.0323 (7)0.0210 (6)0.0385 (8)−0.0005 (5)−0.0086 (6)−0.0013 (6)
O40.0655 (12)0.0340 (9)0.1330 (19)−0.0079 (9)−0.0602 (12)−0.0013 (10)
N10.0288 (8)0.0187 (7)0.0246 (8)0.0051 (6)−0.0019 (6)−0.0030 (6)
C10.0334 (10)0.0351 (10)0.0271 (11)0.0056 (9)0.0021 (9)0.0002 (8)
C20.0376 (11)0.0297 (10)0.0273 (11)0.0068 (8)0.0025 (8)0.0064 (8)
C30.0301 (10)0.0306 (10)0.0374 (11)0.0032 (8)−0.0084 (9)−0.0001 (9)
C40.0345 (10)0.0269 (10)0.0492 (13)0.0013 (8)−0.0115 (9)−0.0061 (9)
N20.0418 (11)0.0547 (13)0.0613 (14)−0.0206 (10)−0.0043 (10)−0.0035 (10)
C50.0403 (19)0.057 (2)0.041 (2)−0.0004 (15)0.0000.000
C60.074 (2)0.122 (3)0.0467 (18)−0.048 (2)0.0007 (15)0.0132 (18)
Co1—O3i1.8790 (12)C1—C21.512 (3)
Co1—O31.8790 (12)C2—H2A0.9700
Co1—O11.8882 (13)C2—H2B0.9700
Co1—O1i1.8882 (13)C3—C41.508 (3)
Co1—N1i1.9299 (14)C3—H3A0.9700
Co1—N11.9299 (14)C3—H3B0.9700
O1—C11.286 (2)N2—C51.308 (3)
O2—C11.230 (2)N2—C61.344 (4)
O3—C41.296 (2)N2—H20.8599
O4—C41.207 (3)C5—N2ii1.308 (3)
N1—C21.480 (2)C5—H50.9300
N1—C31.483 (2)C6—C6ii1.329 (6)
N1—H10.7879C6—H60.9300
O3i—Co1—O3180.00 (9)O1—C1—C2115.72 (17)
O3i—Co1—O190.44 (6)N1—C2—C1109.88 (16)
O3—Co1—O189.56 (6)N1—C2—H2A109.7
O3i—Co1—O1i89.56 (6)C1—C2—H2A109.7
O3—Co1—O1i90.44 (6)N1—C2—H2B109.7
O1—Co1—O1i180.0C1—C2—H2B109.7
O3i—Co1—N1i87.43 (6)H2A—C2—H2B108.2
O3—Co1—N1i92.57 (6)N1—C3—C4111.22 (15)
O1—Co1—N1i93.65 (6)N1—C3—H3A109.4
O1i—Co1—N1i86.35 (6)C4—C3—H3A109.4
O3i—Co1—N192.57 (6)N1—C3—H3B109.4
O3—Co1—N187.43 (6)C4—C3—H3B109.4
O1—Co1—N186.35 (6)H3A—C3—H3B108.0
O1i—Co1—N193.65 (6)O4—C4—O3123.3 (2)
N1i—Co1—N1180.00 (7)O4—C4—C3120.91 (19)
C1—O1—Co1114.38 (12)O3—C4—C3115.83 (16)
C4—O3—Co1115.36 (12)C5—N2—C6108.8 (2)
C2—N1—C3113.95 (15)C5—N2—H2125.6
C2—N1—Co1106.52 (11)C6—N2—H2125.6
C3—N1—Co1108.42 (11)N2ii—C5—N2108.3 (3)
C2—N1—H1107.2N2ii—C5—H5125.9
C3—N1—H1108.4N2—C5—H5125.9
Co1—N1—H1112.5C6ii—C6—N2107.09 (15)
O2—C1—O1123.87 (19)C6ii—C6—H6126.5
O2—C1—C2120.40 (18)N2—C6—H6126.5
O3i—Co1—O1—C177.41 (15)O1i—Co1—N1—C380.29 (12)
O3—Co1—O1—C1−102.59 (15)Co1—O1—C1—O2−176.80 (17)
N1i—Co1—O1—C1164.87 (14)Co1—O1—C1—C22.0 (2)
N1—Co1—O1—C1−15.13 (14)C3—N1—C2—C192.47 (19)
O1—Co1—O3—C490.08 (15)Co1—N1—C2—C1−27.03 (19)
O1i—Co1—O3—C4−89.92 (15)O2—C1—C2—N1−163.64 (19)
N1i—Co1—O3—C4−176.29 (15)O1—C1—C2—N117.5 (3)
N1—Co1—O3—C43.71 (15)C2—N1—C3—C4−104.50 (19)
O3i—Co1—N1—C2−66.96 (12)Co1—N1—C3—C413.92 (19)
O3—Co1—N1—C2113.04 (12)Co1—O3—C4—O4−176.8 (2)
O1—Co1—N1—C223.32 (12)Co1—O3—C4—C33.9 (2)
O1i—Co1—N1—C2−156.68 (12)N1—C3—C4—O4168.6 (2)
O3i—Co1—N1—C3170.01 (12)N1—C3—C4—O3−12.2 (3)
O3—Co1—N1—C3−9.99 (12)C6—N2—C5—N2ii0.4 (2)
O1—Co1—N1—C3−99.71 (12)C5—N2—C6—C6ii−1.2 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1···O3iii0.792.122.880 (2)161
N2—H2···O2iv0.861.952.775 (3)162
C3—H3B···O2v0.972.433.338 (3)156
C5—H5···O4iii0.932.363.117 (4)138
C5—H5···O4vi0.932.363.117 (4)138
C1—O2···Cg1vii1.230 (2)3.54 (1)3.953 (2).
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the imidazolium ring.

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O3i0.792.122.880 (2)161
N2—H2⋯O2ii0.861.952.775 (3)162
C3—H3B⋯O2iii0.972.433.338 (3)156
C5—H5⋯O4i0.932.363.117 (4)138
C5—H5⋯O4iv0.932.363.117 (4)138
C1—O2⋯Cg1v1.23 (1)3.54 (1)3.953 (2)0 ?

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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