Literature DB >> 21583748

{6,6'-Diethoxy-2,2'-[4,5-dimethyl-o-phenylenebis(nitrilomethylidyne)]di-phenolato}nickel(II) dihydrate.

Hadi Kargar, Reza Kia, Arezoo Jamshidvand, Hoong-Kun Fun.   

Abstract

In the title complex, [Ni(C(26)H(26)N(2)O(4))]·2H(2)O, the Ni(II) ion, lying on a twofold crystallographic rotation axis, has a square-planar geometry, being coordinated by the N(2)O(2) unit of the tetra-dentate Schiff base ligand. The asymmetric unit of the title compound comprises one-half of the complex mol-ecule and one of the water mol-ecules of crystallization. The water H atoms form bifurcated O-H⋯(O,O) hydrogen bonds with the O atoms of the phenolato and eth-oxy groups with R(1) (2)(5) and R(1) (2)(6) ring motifs. The dihedral angle between the central benzene ring and the two outer benzene rings are 4.07 (11) and 3.99 (12)°. The dihedral angle between the two O-Ni-N coordination planes is only 0.77 (11)°. In the crystal structure, the mol-ecules are linked together into extended chains along the c axis by inter-molecular O-H⋯O and C-H⋯O inter-actions. An inter-esting feature of the crystal structure is a short inter-molecular CC [3.355 (3) Å] contact, which is shorter than the sum of the van der Waals radii. The crystal structure may be further stabilized by inter-molecular π-π inter-actions [centroid-centroid distances in the range 3.5758 (13)-3.6337 (13) Å].

Entities:  

Year:  2009        PMID: 21583748      PMCID: PMC2977562          DOI: 10.1107/S1600536809012641

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see Allen et al. (1987 ▶). For related structures see, for example: Clark et al. (1968 ▶, 1969 ▶, 1970 ▶). For the applications and bioactivity of Schiff base complexes see, for example: Elmali et al. (2000 ▶); Blower (1998 ▶); Granovski et al. (1993 ▶); Li & Chang, (1991 ▶); Shahrokhian et al. (2000 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

[Ni(C26H26N2O4)]·2H2O M = 525.23 Orthorhombic, a = 12.8706 (4) Å b = 16.1130 (4) Å c = 11.8546 (3) Å V = 2458.45 (12) Å3 Z = 4 Mo Kα radiation μ = 0.83 mm−1 T = 294 K 0.30 × 0.16 × 0.08 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.790, T max = 0.935 16330 measured reflections 3517 independent reflections 2007 reflections with I > 2σI) R int = 0.065

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.122 S = 1.01 3517 reflections 161 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.51 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809012641/cs2114sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809012641/cs2114Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C26H26N2O4)]·2H2OF(000) = 1104
Mr = 525.23Dx = 1.419 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 2497 reflections
a = 12.8706 (4) Åθ = 2.7–22.3°
b = 16.1130 (4) ŵ = 0.83 mm1
c = 11.8546 (3) ÅT = 294 K
V = 2458.45 (12) Å3Block, red
Z = 40.30 × 0.16 × 0.08 mm
Bruker APEXII CCD area-detector diffractometer3517 independent reflections
Radiation source: fine-focus sealed tube2007 reflections with I > 2σ(I)
graphiteRint = 0.065
φ and ω scansθmax = 29.8°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −17→17
Tmin = 0.790, Tmax = 0.935k = −22→22
16330 measured reflectionsl = −16→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0543P)2 + 0.1108P] where P = (Fo2 + 2Fc2)/3
3517 reflections(Δ/σ)max < 0.001
161 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.51 e Å3
xyzUiso*/Ueq
Ni10.5000−0.00935 (2)0.25000.04044 (15)
O10.44372 (13)0.07589 (9)0.33400 (13)0.0501 (4)
O20.38481 (16)0.21443 (10)0.42373 (15)0.0716 (6)
N10.44336 (14)−0.09376 (10)0.33719 (15)0.0398 (4)
C10.38667 (17)0.06930 (14)0.4246 (2)0.0441 (5)
C20.3505 (2)0.14350 (15)0.4772 (2)0.0524 (6)
C30.2894 (2)0.14174 (16)0.5706 (2)0.0605 (7)
H3A0.26590.19120.60200.073*
C40.2614 (2)0.06548 (19)0.6203 (2)0.0660 (8)
H4A0.21930.06460.68410.079*
C50.2961 (2)−0.00668 (16)0.5746 (2)0.0566 (7)
H5A0.2790−0.05680.60880.068*
C60.35820 (19)−0.00679 (13)0.4755 (2)0.0451 (6)
C70.39054 (17)−0.08387 (14)0.42982 (19)0.0441 (5)
H7A0.3725−0.13150.46950.053*
C80.46786 (17)−0.17483 (13)0.29740 (18)0.0412 (5)
C90.43332 (19)−0.24982 (14)0.3410 (2)0.0498 (6)
H9A0.3879−0.24970.40200.060*
C100.4649 (2)−0.32468 (14)0.2957 (2)0.0519 (6)
C110.3545 (2)0.29234 (15)0.4698 (3)0.0759 (9)
H11A0.37830.29740.54710.091*
H11B0.27940.29790.46870.091*
C120.4041 (3)0.35795 (18)0.3968 (3)0.1078 (13)
H12A0.38240.41190.42190.162*
H12B0.38320.35000.31980.162*
H12C0.47830.35370.40220.162*
C130.4247 (3)−0.40558 (15)0.3438 (2)0.0791 (10)
H13A0.3822−0.39430.40860.119*
H13B0.4823−0.43990.36560.119*
H13C0.3841−0.43380.28770.119*
O1W0.38489 (17)0.20940 (12)0.15851 (16)0.0853 (6)
H1W10.37250.19550.22390.128*
H2W10.44750.20180.16480.128*
U11U22U33U12U13U23
Ni10.0477 (2)0.0286 (2)0.0450 (3)0.0000.00116 (19)0.000
O10.0667 (11)0.0307 (8)0.0530 (10)0.0029 (8)0.0057 (9)−0.0006 (7)
O20.1017 (15)0.0353 (9)0.0778 (13)0.0146 (9)0.0068 (11)−0.0068 (9)
N10.0447 (11)0.0313 (9)0.0434 (11)0.0007 (8)0.0005 (9)−0.0028 (8)
C10.0453 (13)0.0388 (12)0.0481 (14)0.0059 (10)−0.0064 (11)−0.0071 (11)
C20.0561 (15)0.0429 (14)0.0582 (16)0.0118 (12)−0.0078 (12)−0.0123 (12)
C30.0610 (17)0.0553 (16)0.0651 (18)0.0144 (13)−0.0023 (14)−0.0211 (14)
C40.0646 (17)0.0690 (19)0.0643 (18)0.0047 (14)0.0141 (14)−0.0177 (15)
C50.0582 (16)0.0584 (16)0.0533 (17)−0.0020 (12)0.0091 (13)−0.0069 (12)
C60.0447 (13)0.0418 (13)0.0487 (15)0.0012 (10)−0.0008 (10)−0.0074 (11)
C70.0470 (13)0.0392 (12)0.0461 (14)−0.0042 (10)0.0000 (11)−0.0020 (10)
C80.0496 (13)0.0312 (11)0.0429 (13)0.0000 (9)−0.0010 (10)−0.0010 (9)
C90.0603 (15)0.0384 (12)0.0507 (14)0.0005 (11)0.0115 (12)0.0003 (11)
C100.0660 (16)0.0321 (12)0.0576 (15)−0.0057 (10)0.0056 (12)0.0027 (10)
C110.079 (2)0.0387 (15)0.111 (2)0.0179 (14)−0.0129 (18)−0.0251 (16)
C120.161 (4)0.0409 (17)0.122 (3)0.016 (2)−0.011 (3)−0.0029 (18)
C130.111 (3)0.0372 (15)0.089 (2)−0.0093 (15)0.0313 (19)0.0036 (14)
O1W0.1029 (16)0.0723 (14)0.0809 (14)0.0234 (12)−0.0218 (12)0.0009 (11)
Ni1—O1i1.8447 (15)C7—H7A0.9300
Ni1—O11.8447 (15)C8—C91.387 (3)
Ni1—N11.8573 (17)C8—C8i1.396 (4)
Ni1—N1i1.8573 (17)C9—C101.381 (3)
O1—C11.306 (3)C9—H9A0.9300
O2—C21.380 (3)C10—C10i1.410 (5)
O2—C111.423 (3)C10—C131.514 (3)
N1—C71.301 (3)C11—C121.508 (4)
N1—C81.424 (2)C11—H11A0.9700
C1—C61.415 (3)C11—H11B0.9700
C1—C21.427 (3)C12—H12A0.9600
C2—C31.358 (3)C12—H12B0.9600
C3—C41.410 (4)C12—H12C0.9600
C3—H3A0.9300C13—H13A0.9600
C4—C51.358 (3)C13—H13B0.9600
C4—H4A0.9300C13—H13C0.9600
C5—C61.421 (3)O1W—H1W10.8226
C5—H5A0.9300O1W—H2W10.8179
C6—C71.417 (3)
O1i—Ni1—O183.75 (10)N1—C7—H7A117.2
O1i—Ni1—N1178.81 (7)C6—C7—H7A117.2
O1—Ni1—N195.21 (7)C9—C8—C8i119.32 (13)
O1i—Ni1—N1i95.21 (7)C9—C8—N1127.2 (2)
O1—Ni1—N1i178.81 (7)C8i—C8—N1113.45 (11)
N1—Ni1—N1i85.84 (11)C10—C9—C8121.4 (2)
C1—O1—Ni1127.19 (14)C10—C9—H9A119.3
C2—O2—C11117.8 (2)C8—C9—H9A119.3
C7—N1—C8120.49 (18)C9—C10—C10i119.14 (14)
C7—N1—Ni1125.80 (15)C9—C10—C13120.3 (2)
C8—N1—Ni1113.61 (14)C10i—C10—C13120.54 (14)
O1—C1—C6124.54 (19)O2—C11—C12106.4 (2)
O1—C1—C2118.4 (2)O2—C11—H11A110.5
C6—C1—C2117.1 (2)C12—C11—H11A110.5
C3—C2—O2125.3 (2)O2—C11—H11B110.5
C3—C2—C1121.8 (2)C12—C11—H11B110.5
O2—C2—C1112.9 (2)H11A—C11—H11B108.6
C2—C3—C4120.5 (2)C11—C12—H12A109.5
C2—C3—H3A119.8C11—C12—H12B109.5
C4—C3—H3A119.8H12A—C12—H12B109.5
C5—C4—C3119.7 (3)C11—C12—H12C109.5
C5—C4—H4A120.2H12A—C12—H12C109.5
C3—C4—H4A120.2H12B—C12—H12C109.5
C4—C5—C6121.1 (2)C10—C13—H13A109.5
C4—C5—H5A119.5C10—C13—H13B109.5
C6—C5—H5A119.5H13A—C13—H13B109.5
C1—C6—C7121.4 (2)C10—C13—H13C109.5
C1—C6—C5119.8 (2)H13A—C13—H13C109.5
C7—C6—C5118.8 (2)H13B—C13—H13C109.5
N1—C7—C6125.7 (2)H1W1—O1W—H2W193.7
O1i—Ni1—O1—C1−177.9 (2)C2—C1—C6—C7−179.8 (2)
O1—Ni1—N1—C7−4.77 (19)O1—C1—C6—C5179.7 (2)
N1i—Ni1—N1—C7175.8 (2)C2—C1—C6—C50.0 (3)
O1—Ni1—N1—C8178.82 (14)C4—C5—C6—C11.5 (4)
N1i—Ni1—N1—C8−0.62 (11)C4—C5—C6—C7−178.6 (2)
Ni1—O1—C1—C60.5 (3)C8—N1—C7—C6−177.5 (2)
Ni1—O1—C1—C2−179.89 (15)Ni1—N1—C7—C66.3 (3)
C11—O2—C2—C30.2 (4)C1—C6—C7—N1−3.4 (4)
C11—O2—C2—C1−179.2 (2)C5—C6—C7—N1176.7 (2)
O1—C1—C2—C3178.9 (2)C7—N1—C8—C96.6 (4)
C6—C1—C2—C3−1.4 (3)Ni1—N1—C8—C9−176.77 (19)
O1—C1—C2—O2−1.6 (3)C7—N1—C8—C8i−174.9 (2)
C6—C1—C2—O2178.1 (2)Ni1—N1—C8—C8i1.8 (3)
O2—C2—C3—C4−178.1 (2)C8i—C8—C9—C103.0 (4)
C1—C2—C3—C41.3 (4)N1—C8—C9—C10−178.6 (2)
C2—C3—C4—C50.3 (4)C8—C9—C10—C10i1.0 (5)
C3—C4—C5—C6−1.7 (4)C8—C9—C10—C13−179.1 (2)
O1—C1—C6—C7−0.2 (4)C2—O2—C11—C12178.9 (2)
D—H···AD—HH···AD···AD—H···A
O1W—H1W1···O10.822.503.087 (2)129
O1W—H1W1···O20.822.393.145 (3)152
O1W—H2W1···O1i0.822.473.083 (3)133
O1W—H2W1···O2i0.822.413.121 (3)146
C7—H7A···O1Wii0.932.573.383 (3)146
Table 1

Selected bond lengths (Å)

Ni1—O11.8447 (15)
Ni1—N11.8573 (17)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W1⋯O10.822.503.087 (2)129
O1W—H1W1⋯O20.822.393.145 (3)152
O1W—H2W1⋯O1i0.822.473.083 (3)133
O1W—H2W1⋯O2i0.822.413.121 (3)146
C7—H7A⋯O1Wii0.932.573.383 (3)146

Symmetry codes: (i) ; (ii) .

  4 in total

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Authors: 
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3.  Salicylate-selective electrodes based on AI(III) and Sn(IV) salophens

Authors: 
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4.  Structure validation in chemical crystallography.

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  4 in total
  1 in total

1.  {4,4'-Dibromo-6,6'-dimeth-oxy-2,2'-[1,2-phenyl-enebis(nitrilo-methanylyl-idene)]-κO,N,N',O}nickel(II).

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-10
  1 in total

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