| Literature DB >> 21583667 |
G Aridoss, D Gayathri, D Velmurugan, M S Kim, Yeon Tae Jeong.
Abstract
In the title compound C(19)H(16)ClF(2)NO(2), the piperidone ring adopts a twist-boat conformation with the two out-of-plane atoms deviating by 0.544 (1) and 0.511 (1) Å from the plane through the remaining atoms in the ring. Sterically favoured non-H-atom C⋯O inter-molecular contacts are observed in the structure, within a 3.00 Å range. The crystal packing is stabilized by C-H⋯O and C-H⋯F hydrogen bonds and an inter-molecular π-π inter-action [centroid-centroid separation of 3.783 (1) Å]. Alternating C-H⋯O and C-H⋯F inter-molecular inter-actions generate chains running along the a axis, while a centrosymmetric R(2) (2)(16) ring involving C-H⋯O inter-actions is formed centred at (1/2, 1/2, 0).Entities:
Year: 2009 PMID: 21583667 PMCID: PMC2977122 DOI: 10.1107/S1600536809028529
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H16ClF2NO2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2558 reflections |
| θ = 2.0–28.1° | |
| µ = 0.27 mm−1 | |
| β = 100.629 (1)° | Block, colorless |
| 0.29 × 0.25 × 0.22 mm | |
| Bruker SMART APEX diffractometer | 3515 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 28.1°, θmin = 2.0° |
| ω scans | |
| 18143 measured reflections | |
| 3875 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3875 reflections | (Δ/σ)max < 0.001 |
| 226 parameters | Δρmax = 0.34 e Å−3 |
| 0 restraints | Δρmin = −0.35 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.19220 (11) | 0.60188 (15) | 0.12209 (7) | 0.0342 (3) | |
| H1 | 0.1633 | 0.4907 | 0.1291 | 0.041* | |
| C2 | 0.14537 (12) | 0.70807 (17) | 0.17787 (7) | 0.0391 (3) | |
| H2A | 0.0532 | 0.7101 | 0.1680 | 0.047* | |
| H2B | 0.1725 | 0.6601 | 0.2248 | 0.047* | |
| C3 | 0.19437 (12) | 0.87902 (16) | 0.17849 (6) | 0.0355 (3) | |
| C4 | 0.31441 (12) | 0.89729 (15) | 0.14859 (7) | 0.0366 (3) | |
| H4A | 0.3605 | 0.9917 | 0.1705 | 0.044* | |
| H4B | 0.2914 | 0.9184 | 0.0977 | 0.044* | |
| C5 | 0.40356 (11) | 0.74875 (14) | 0.15997 (6) | 0.0315 (2) | |
| H5 | 0.4393 | 0.7400 | 0.2111 | 0.038* | |
| C6 | 0.38663 (12) | 0.44552 (15) | 0.14846 (6) | 0.0342 (3) | |
| C7 | 0.52903 (13) | 0.44165 (16) | 0.17627 (8) | 0.0437 (3) | |
| H7A | 0.5478 | 0.4980 | 0.2218 | 0.052* | |
| H7B | 0.5722 | 0.4986 | 0.1430 | 0.052* | |
| C8 | 0.14016 (11) | 0.64593 (15) | 0.04440 (7) | 0.0359 (3) | |
| C9 | 0.18650 (13) | 0.56233 (18) | −0.00921 (8) | 0.0438 (3) | |
| H9 | 0.2497 | 0.4839 | 0.0024 | 0.053* | |
| C10 | 0.13769 (15) | 0.5973 (2) | −0.07922 (8) | 0.0497 (3) | |
| C11 | 0.04478 (16) | 0.7120 (2) | −0.09979 (8) | 0.0530 (4) | |
| H11 | 0.0147 | 0.7346 | −0.1478 | 0.064* | |
| C12 | −0.00203 (16) | 0.7923 (2) | −0.04692 (9) | 0.0548 (4) | |
| H12 | −0.0659 | 0.8695 | −0.0593 | 0.066* | |
| C13 | 0.04442 (14) | 0.76014 (18) | 0.02456 (8) | 0.0459 (3) | |
| H13 | 0.0112 | 0.8156 | 0.0596 | 0.055* | |
| C14 | 0.51171 (11) | 0.78384 (15) | 0.12008 (7) | 0.0330 (2) | |
| C15 | 0.62680 (12) | 0.84067 (18) | 0.15766 (8) | 0.0420 (3) | |
| H15 | 0.6415 | 0.8480 | 0.2072 | 0.050* | |
| C16 | 0.71890 (13) | 0.8861 (2) | 0.11948 (9) | 0.0528 (4) | |
| C17 | 0.70255 (15) | 0.8775 (2) | 0.04699 (10) | 0.0558 (4) | |
| H17 | 0.7667 | 0.9098 | 0.0231 | 0.067* | |
| C18 | 0.58841 (15) | 0.8196 (2) | 0.01009 (8) | 0.0507 (4) | |
| H18 | 0.5751 | 0.8119 | −0.0394 | 0.061* | |
| C19 | 0.49307 (14) | 0.77279 (17) | 0.04628 (7) | 0.0416 (3) | |
| H19 | 0.4163 | 0.7338 | 0.0209 | 0.050* | |
| N1 | 0.33311 (9) | 0.59708 (12) | 0.13708 (5) | 0.0316 (2) | |
| O1 | 0.14246 (10) | 0.99449 (13) | 0.20033 (6) | 0.0477 (2) | |
| O2 | 0.32477 (10) | 0.32101 (12) | 0.13649 (6) | 0.0467 (2) | |
| F1 | 0.18216 (12) | 0.51239 (17) | −0.13076 (6) | 0.0785 (3) | |
| F2 | 0.83117 (10) | 0.9428 (2) | 0.15588 (7) | 0.0907 (4) | |
| Cl1 | 0.58658 (4) | 0.24037 (5) | 0.18722 (3) | 0.06261 (15) |
| C1 | 0.0292 (5) | 0.0319 (6) | 0.0411 (6) | −0.0020 (4) | 0.0055 (5) | 0.0025 (5) |
| C2 | 0.0355 (6) | 0.0431 (7) | 0.0411 (6) | 0.0005 (5) | 0.0129 (5) | 0.0045 (5) |
| C3 | 0.0356 (6) | 0.0407 (7) | 0.0299 (5) | 0.0040 (5) | 0.0056 (4) | −0.0001 (5) |
| C4 | 0.0389 (6) | 0.0302 (6) | 0.0422 (6) | −0.0006 (5) | 0.0118 (5) | −0.0019 (5) |
| C5 | 0.0318 (6) | 0.0319 (6) | 0.0309 (5) | −0.0024 (4) | 0.0060 (4) | −0.0012 (4) |
| C6 | 0.0375 (6) | 0.0327 (6) | 0.0328 (5) | 0.0023 (5) | 0.0075 (5) | 0.0006 (4) |
| C7 | 0.0392 (7) | 0.0337 (6) | 0.0572 (8) | 0.0069 (5) | 0.0060 (6) | 0.0044 (6) |
| C8 | 0.0310 (6) | 0.0328 (6) | 0.0420 (6) | −0.0048 (5) | 0.0020 (5) | −0.0005 (5) |
| C9 | 0.0399 (7) | 0.0435 (7) | 0.0458 (7) | 0.0008 (5) | 0.0021 (5) | −0.0040 (6) |
| C10 | 0.0496 (8) | 0.0558 (9) | 0.0434 (7) | −0.0096 (7) | 0.0075 (6) | −0.0066 (6) |
| C11 | 0.0545 (8) | 0.0570 (9) | 0.0425 (7) | −0.0111 (7) | −0.0043 (6) | 0.0087 (7) |
| C12 | 0.0507 (8) | 0.0511 (8) | 0.0571 (9) | 0.0078 (7) | −0.0045 (7) | 0.0090 (7) |
| C13 | 0.0414 (7) | 0.0447 (8) | 0.0495 (8) | 0.0051 (6) | 0.0026 (6) | 0.0006 (6) |
| C14 | 0.0319 (6) | 0.0297 (5) | 0.0383 (6) | 0.0006 (4) | 0.0091 (5) | 0.0008 (4) |
| C15 | 0.0356 (6) | 0.0450 (7) | 0.0443 (7) | −0.0028 (5) | 0.0046 (5) | 0.0046 (6) |
| C16 | 0.0303 (6) | 0.0584 (9) | 0.0685 (10) | −0.0043 (6) | 0.0056 (6) | 0.0149 (7) |
| C17 | 0.0423 (8) | 0.0624 (10) | 0.0686 (10) | 0.0073 (7) | 0.0261 (7) | 0.0195 (8) |
| C18 | 0.0588 (9) | 0.0532 (9) | 0.0451 (7) | 0.0056 (7) | 0.0227 (7) | 0.0028 (6) |
| C19 | 0.0437 (7) | 0.0433 (7) | 0.0388 (6) | −0.0024 (5) | 0.0104 (5) | −0.0027 (5) |
| N1 | 0.0294 (5) | 0.0295 (5) | 0.0353 (5) | −0.0005 (4) | 0.0041 (4) | 0.0020 (4) |
| O1 | 0.0472 (5) | 0.0474 (6) | 0.0510 (6) | 0.0082 (4) | 0.0157 (4) | −0.0071 (4) |
| O2 | 0.0474 (5) | 0.0311 (5) | 0.0601 (6) | −0.0014 (4) | 0.0060 (4) | −0.0032 (4) |
| F1 | 0.0865 (8) | 0.0996 (9) | 0.0501 (6) | 0.0098 (7) | 0.0145 (5) | −0.0162 (6) |
| F2 | 0.0411 (5) | 0.1322 (12) | 0.0927 (8) | −0.0331 (6) | −0.0035 (5) | 0.0304 (8) |
| Cl1 | 0.0550 (2) | 0.0405 (2) | 0.0879 (3) | 0.01621 (16) | 0.0017 (2) | 0.00367 (18) |
| C1—N1 | 1.4827 (15) | C8—C9 | 1.3948 (19) |
| C1—C8 | 1.5251 (17) | C9—C10 | 1.370 (2) |
| C1—C2 | 1.5279 (18) | C9—H9 | 0.9300 |
| C1—H1 | 0.9800 | C10—F1 | 1.3590 (19) |
| C2—C3 | 1.4963 (19) | C10—C11 | 1.373 (2) |
| C2—H2A | 0.9700 | C11—C12 | 1.373 (3) |
| C2—H2B | 0.9700 | C11—H11 | 0.9300 |
| C3—O1 | 1.2099 (16) | C12—C13 | 1.386 (2) |
| C3—C4 | 1.5056 (17) | C12—H12 | 0.9300 |
| C4—C5 | 1.5379 (17) | C13—H13 | 0.9300 |
| C4—H4A | 0.9700 | C14—C19 | 1.3857 (18) |
| C4—H4B | 0.9700 | C14—C15 | 1.3861 (18) |
| C5—N1 | 1.4781 (15) | C15—C16 | 1.380 (2) |
| C5—C14 | 1.5246 (16) | C15—H15 | 0.9300 |
| C5—H5 | 0.9800 | C16—F2 | 1.3542 (18) |
| C6—O2 | 1.2154 (16) | C16—C17 | 1.361 (2) |
| C6—N1 | 1.3691 (15) | C17—C18 | 1.376 (2) |
| C6—C7 | 1.5187 (18) | C17—H17 | 0.9300 |
| C7—Cl1 | 1.7609 (14) | C18—C19 | 1.387 (2) |
| C7—H7A | 0.9700 | C18—H18 | 0.9300 |
| C7—H7B | 0.9700 | C19—H19 | 0.9300 |
| C8—C13 | 1.3883 (19) | ||
| N1—C1—C8 | 111.69 (10) | C9—C8—C1 | 118.56 (12) |
| N1—C1—C2 | 109.49 (10) | C10—C9—C8 | 119.11 (14) |
| C8—C1—C2 | 115.56 (11) | C10—C9—H9 | 120.4 |
| N1—C1—H1 | 106.5 | C8—C9—H9 | 120.4 |
| C8—C1—H1 | 106.5 | F1—C10—C9 | 118.32 (15) |
| C2—C1—H1 | 106.5 | F1—C10—C11 | 118.48 (14) |
| C3—C2—C1 | 112.34 (10) | C9—C10—C11 | 123.19 (15) |
| C3—C2—H2A | 109.1 | C12—C11—C10 | 117.56 (14) |
| C1—C2—H2A | 109.1 | C12—C11—H11 | 121.2 |
| C3—C2—H2B | 109.1 | C10—C11—H11 | 121.2 |
| C1—C2—H2B | 109.1 | C11—C12—C13 | 121.06 (15) |
| H2A—C2—H2B | 107.9 | C11—C12—H12 | 119.5 |
| O1—C3—C2 | 123.62 (12) | C13—C12—H12 | 119.5 |
| O1—C3—C4 | 122.01 (12) | C12—C13—C8 | 120.59 (15) |
| C2—C3—C4 | 114.36 (10) | C12—C13—H13 | 119.7 |
| C3—C4—C5 | 114.73 (10) | C8—C13—H13 | 119.7 |
| C3—C4—H4A | 108.6 | C19—C14—C15 | 119.59 (12) |
| C5—C4—H4A | 108.6 | C19—C14—C5 | 120.83 (11) |
| C3—C4—H4B | 108.6 | C15—C14—C5 | 119.36 (11) |
| C5—C4—H4B | 108.6 | C16—C15—C14 | 118.16 (13) |
| H4A—C4—H4B | 107.6 | C16—C15—H15 | 120.9 |
| N1—C5—C14 | 113.88 (9) | C14—C15—H15 | 120.9 |
| N1—C5—C4 | 110.83 (10) | F2—C16—C17 | 118.22 (14) |
| C14—C5—C4 | 106.77 (9) | F2—C16—C15 | 118.41 (15) |
| N1—C5—H5 | 108.4 | C17—C16—C15 | 123.37 (14) |
| C14—C5—H5 | 108.4 | C16—C17—C18 | 118.13 (13) |
| C4—C5—H5 | 108.4 | C16—C17—H17 | 120.9 |
| O2—C6—N1 | 122.39 (11) | C18—C17—H17 | 120.9 |
| O2—C6—C7 | 121.65 (11) | C17—C18—C19 | 120.47 (14) |
| N1—C6—C7 | 115.96 (11) | C17—C18—H18 | 119.8 |
| C6—C7—Cl1 | 111.56 (10) | C19—C18—H18 | 119.8 |
| C6—C7—H7A | 109.3 | C14—C19—C18 | 120.29 (14) |
| Cl1—C7—H7A | 109.3 | C14—C19—H19 | 119.9 |
| C6—C7—H7B | 109.3 | C18—C19—H19 | 119.9 |
| Cl1—C7—H7B | 109.3 | C6—N1—C5 | 122.80 (10) |
| H7A—C7—H7B | 108.0 | C6—N1—C1 | 115.82 (10) |
| C13—C8—C9 | 118.47 (13) | C5—N1—C1 | 118.67 (9) |
| C13—C8—C1 | 122.89 (12) | ||
| N1—C1—C2—C3 | 59.23 (13) | C4—C5—C14—C19 | −75.31 (14) |
| C8—C1—C2—C3 | −67.92 (14) | N1—C5—C14—C15 | −138.10 (12) |
| C1—C2—C3—O1 | 156.26 (12) | C4—C5—C14—C15 | 99.24 (13) |
| C1—C2—C3—C4 | −23.06 (15) | C19—C14—C15—C16 | 0.6 (2) |
| O1—C3—C4—C5 | 149.28 (12) | C5—C14—C15—C16 | −173.98 (13) |
| C2—C3—C4—C5 | −31.38 (15) | C14—C15—C16—F2 | 179.52 (14) |
| C3—C4—C5—N1 | 50.02 (14) | C14—C15—C16—C17 | −0.2 (2) |
| C3—C4—C5—C14 | 174.56 (10) | F2—C16—C17—C18 | 179.94 (16) |
| O2—C6—C7—Cl1 | 0.30 (17) | C15—C16—C17—C18 | −0.4 (3) |
| N1—C6—C7—Cl1 | −179.00 (9) | C16—C17—C18—C19 | 0.4 (2) |
| N1—C1—C8—C13 | −134.11 (13) | C15—C14—C19—C18 | −0.6 (2) |
| C2—C1—C8—C13 | −8.06 (18) | C5—C14—C19—C18 | 173.95 (13) |
| N1—C1—C8—C9 | 49.02 (15) | C17—C18—C19—C14 | 0.0 (2) |
| C2—C1—C8—C9 | 175.06 (11) | O2—C6—N1—C5 | 171.94 (12) |
| C13—C8—C9—C10 | 1.0 (2) | C7—C6—N1—C5 | −8.77 (16) |
| C1—C8—C9—C10 | 178.01 (12) | O2—C6—N1—C1 | 10.87 (17) |
| C8—C9—C10—F1 | −178.72 (13) | C7—C6—N1—C1 | −169.84 (11) |
| C8—C9—C10—C11 | 0.3 (2) | C14—C5—N1—C6 | 66.79 (14) |
| F1—C10—C11—C12 | 177.74 (15) | C4—C5—N1—C6 | −172.80 (10) |
| C9—C10—C11—C12 | −1.2 (2) | C14—C5—N1—C1 | −132.65 (11) |
| C10—C11—C12—C13 | 1.0 (3) | C4—C5—N1—C1 | −12.24 (14) |
| C11—C12—C13—C8 | 0.3 (3) | C8—C1—N1—C6 | −109.19 (12) |
| C9—C8—C13—C12 | −1.3 (2) | C2—C1—N1—C6 | 121.50 (11) |
| C1—C8—C13—C12 | −178.13 (13) | C8—C1—N1—C5 | 88.92 (13) |
| N1—C5—C14—C19 | 47.35 (16) | C2—C1—N1—C5 | −40.39 (14) |
| H··· | ||||
| C2—H2B···O1i | 0.97 | 2.60 | 3.415 (2) | 142 |
| C7—H7A···F2ii | 0.97 | 2.49 | 3.270 (2) | 137 |
| C18—H18···O2iii | 0.93 | 2.55 | 3.308 (2) | 139 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C2—H2 | 0.97 | 2.60 | 3.415 (2) | 142 |
| C7—H7 | 0.97 | 2.49 | 3.270 (2) | 137 |
| C18—H18⋯O2iii | 0.93 | 2.55 | 3.308 (2) | 139 |
Symmetry codes: (i) ; (ii) ; (iii) .