| Literature DB >> 21583644 |
Abstract
In the title compound, C(10)H(9)BrN(4), the dihedral angle between the benzene and pyrazine rings is 61.34 (5)°. Inter-molecular N-H⋯N hydrogen bonds and N-H⋯π inter-actions assemble the mol-ecules into a three-dimensional network structure.Entities:
Year: 2009 PMID: 21583644 PMCID: PMC2977195 DOI: 10.1107/S1600536809028554
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H9BrN4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2474 reflections |
| θ = 2.6–27.6° | |
| µ = 3.85 mm−1 | |
| β = 91.307 (2)° | Block, colorless |
| 0.15 × 0.12 × 0.10 mm | |
| Bruker SMART APEX diffractometer | 1871 independent reflections |
| Radiation source: fine-focus sealed tube | 1555 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 5494 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.002 | |
| 1871 reflections | Δρmax = 0.33 e Å−3 |
| 140 parameters | Δρmin = −0.33 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0241 (11) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | −0.05901 (4) | 0.351301 (18) | 1.09071 (3) | 0.05020 (14) | |
| N1 | 0.1466 (3) | 0.39455 (14) | 0.4791 (2) | 0.0455 (5) | |
| H1A | 0.1000 | 0.4388 | 0.4334 | 0.046 (8)* | |
| H1B | 0.2400 | 0.3676 | 0.4472 | 0.075 (11)* | |
| N2 | −0.0254 (3) | 0.43567 (13) | 0.6710 (2) | 0.0404 (5) | |
| N3 | 0.1484 (2) | 0.31467 (12) | 0.84959 (19) | 0.0319 (4) | |
| N4 | 0.3193 (3) | 0.27272 (13) | 0.6497 (2) | 0.0420 (5) | |
| H4 | 0.2980 | 0.2595 | 0.5591 | 0.063 (9)* | |
| C1 | 0.1017 (3) | 0.38587 (14) | 0.6195 (2) | 0.0317 (5) | |
| C2 | 0.1899 (3) | 0.32331 (14) | 0.7117 (2) | 0.0302 (5) | |
| C3 | 0.0152 (3) | 0.36556 (15) | 0.8955 (2) | 0.0343 (5) | |
| C4 | −0.0699 (3) | 0.42447 (16) | 0.8104 (3) | 0.0423 (6) | |
| H4A | −0.1608 | 0.4579 | 0.8488 | 0.051* | |
| C5 | 0.4259 (3) | 0.21097 (15) | 0.7267 (2) | 0.0365 (6) | |
| C6 | 0.4269 (4) | 0.12553 (16) | 0.6809 (3) | 0.0446 (6) | |
| H6 | 0.3565 | 0.1084 | 0.6014 | 0.054* | |
| C7 | 0.5329 (4) | 0.06590 (19) | 0.7538 (3) | 0.0564 (8) | |
| H7 | 0.5338 | 0.0084 | 0.7229 | 0.068* | |
| C8 | 0.6367 (4) | 0.0902 (2) | 0.8710 (3) | 0.0613 (8) | |
| H8 | 0.7056 | 0.0491 | 0.9209 | 0.074* | |
| C9 | 0.6390 (4) | 0.1748 (2) | 0.9145 (3) | 0.0589 (8) | |
| H9 | 0.7108 | 0.1916 | 0.9934 | 0.071* | |
| C10 | 0.5348 (3) | 0.23602 (18) | 0.8419 (3) | 0.0468 (6) | |
| H10 | 0.5383 | 0.2938 | 0.8709 | 0.056* |
| Br1 | 0.0541 (2) | 0.0615 (2) | 0.03565 (17) | 0.00683 (14) | 0.01461 (11) | 0.00123 (12) |
| N1 | 0.0648 (15) | 0.0406 (12) | 0.0314 (11) | 0.0182 (11) | 0.0047 (10) | 0.0082 (9) |
| N2 | 0.0466 (13) | 0.0353 (11) | 0.0392 (12) | 0.0102 (9) | 0.0014 (9) | 0.0047 (9) |
| N3 | 0.0345 (11) | 0.0327 (10) | 0.0288 (10) | 0.0035 (8) | 0.0036 (8) | 0.0018 (8) |
| N4 | 0.0504 (13) | 0.0451 (12) | 0.0310 (11) | 0.0194 (10) | 0.0094 (9) | 0.0070 (9) |
| C1 | 0.0369 (13) | 0.0262 (11) | 0.0320 (12) | 0.0014 (10) | −0.0003 (10) | −0.0008 (9) |
| C2 | 0.0330 (13) | 0.0265 (11) | 0.0312 (12) | 0.0008 (9) | 0.0013 (10) | 0.0001 (9) |
| C3 | 0.0375 (13) | 0.0359 (13) | 0.0297 (12) | −0.0004 (10) | 0.0048 (10) | −0.0004 (10) |
| C4 | 0.0433 (15) | 0.0400 (14) | 0.0440 (15) | 0.0124 (11) | 0.0085 (11) | 0.0005 (11) |
| C5 | 0.0339 (13) | 0.0404 (14) | 0.0356 (12) | 0.0084 (10) | 0.0107 (10) | 0.0087 (11) |
| C6 | 0.0408 (15) | 0.0416 (15) | 0.0516 (16) | 0.0068 (11) | 0.0040 (12) | 0.0028 (12) |
| C7 | 0.0502 (17) | 0.0404 (15) | 0.079 (2) | 0.0149 (13) | 0.0099 (15) | 0.0084 (14) |
| C8 | 0.0492 (18) | 0.069 (2) | 0.066 (2) | 0.0229 (15) | 0.0049 (15) | 0.0211 (16) |
| C9 | 0.0419 (16) | 0.084 (2) | 0.0504 (17) | 0.0121 (15) | −0.0041 (13) | 0.0015 (15) |
| C10 | 0.0438 (15) | 0.0478 (15) | 0.0489 (15) | 0.0067 (12) | 0.0064 (12) | −0.0016 (13) |
| Br1—C3 | 1.906 (2) | C4—H4A | 0.9300 |
| N1—C1 | 1.349 (3) | C5—C10 | 1.378 (4) |
| N1—H1A | 0.8699 | C5—C6 | 1.382 (3) |
| N1—H1B | 0.8700 | C6—C7 | 1.378 (4) |
| N2—C1 | 1.319 (3) | C6—H6 | 0.9300 |
| N2—C4 | 1.344 (3) | C7—C8 | 1.368 (4) |
| N3—C2 | 1.320 (3) | C7—H7 | 0.9300 |
| N3—C3 | 1.344 (3) | C8—C9 | 1.364 (4) |
| N4—C2 | 1.377 (3) | C8—H8 | 0.9300 |
| N4—C5 | 1.420 (3) | C9—C10 | 1.385 (4) |
| N4—H4 | 0.8700 | C9—H9 | 0.9300 |
| C1—C2 | 1.436 (3) | C10—H10 | 0.9300 |
| C3—C4 | 1.349 (3) | ||
| C1—N1—H1A | 115.8 | C3—C4—H4A | 119.4 |
| C1—N1—H1B | 119.8 | C10—C5—C6 | 119.6 (2) |
| H1A—N1—H1B | 121.8 | C10—C5—N4 | 120.8 (2) |
| C1—N2—C4 | 117.7 (2) | C6—C5—N4 | 119.5 (2) |
| C2—N3—C3 | 115.85 (19) | C7—C6—C5 | 119.5 (3) |
| C2—N4—C5 | 124.36 (19) | C7—C6—H6 | 120.2 |
| C2—N4—H4 | 114.5 | C5—C6—H6 | 120.2 |
| C5—N4—H4 | 114.3 | C8—C7—C6 | 120.8 (3) |
| N2—C1—N1 | 119.0 (2) | C8—C7—H7 | 119.6 |
| N2—C1—C2 | 120.2 (2) | C6—C7—H7 | 119.6 |
| N1—C1—C2 | 120.8 (2) | C9—C8—C7 | 119.7 (3) |
| N3—C2—N4 | 121.6 (2) | C9—C8—H8 | 120.1 |
| N3—C2—C1 | 121.5 (2) | C7—C8—H8 | 120.1 |
| N4—C2—C1 | 116.92 (19) | C8—C9—C10 | 120.4 (3) |
| N3—C3—C4 | 123.6 (2) | C8—C9—H9 | 119.8 |
| N3—C3—Br1 | 117.62 (16) | C10—C9—H9 | 119.8 |
| C4—C3—Br1 | 118.81 (18) | C5—C10—C9 | 119.8 (3) |
| N2—C4—C3 | 121.2 (2) | C5—C10—H10 | 120.1 |
| N2—C4—H4A | 119.4 | C9—C10—H10 | 120.1 |
| C4—N2—C1—N1 | 178.7 (2) | N3—C3—C4—N2 | 0.3 (4) |
| C4—N2—C1—C2 | −1.1 (3) | Br1—C3—C4—N2 | −178.49 (19) |
| C3—N3—C2—N4 | −177.5 (2) | C2—N4—C5—C10 | −59.7 (3) |
| C3—N3—C2—C1 | 2.3 (3) | C2—N4—C5—C6 | 123.5 (3) |
| C5—N4—C2—N3 | −3.5 (4) | C10—C5—C6—C7 | 1.9 (4) |
| C5—N4—C2—C1 | 176.6 (2) | N4—C5—C6—C7 | 178.8 (2) |
| N2—C1—C2—N3 | −0.9 (3) | C5—C6—C7—C8 | 0.1 (4) |
| N1—C1—C2—N3 | 179.4 (2) | C6—C7—C8—C9 | −1.6 (5) |
| N2—C1—C2—N4 | 179.0 (2) | C7—C8—C9—C10 | 0.9 (5) |
| N1—C1—C2—N4 | −0.8 (3) | C6—C5—C10—C9 | −2.6 (4) |
| C2—N3—C3—C4 | −2.1 (3) | N4—C5—C10—C9 | −179.4 (2) |
| C2—N3—C3—Br1 | 176.66 (16) | C8—C9—C10—C5 | 1.2 (4) |
| C1—N2—C4—C3 | 1.3 (4) |
| H··· | ||||
| N1—H1B···Cg1i | 0.86 | 2.63 | 3.436 (3) | 157 |
| N1—H1A···N2ii | 0.86 | 2.22 | 3.084 (3) | 169 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.63 | 3.436 (3) | 157 |
| N1—H1 | 0.86 | 2.22 | 3.084 (3) | 169 |
Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the C5–C10 ring.