| Literature DB >> 21583638 |
De-Cai Wang1, Jing Bai, Wei Xu, Tao Gai, Hua-Quan Liu.
Abstract
The title compound, C(11)H(11)ClN(2)O(4), is an important inter-mediate for the preparation of platinum anti-cancer drugs. The dioxolane ring adopts a twist conformation with an equatorially attached chloro-phenyl substituent. In the crystal structure, mol-ecules are linked into a two-dimensional network parallel to (001) by N-H⋯O and C-H⋯O hydrogen bonds.Entities:
Year: 2009 PMID: 21583638 PMCID: PMC2977328 DOI: 10.1107/S1600536809027494
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H11ClN2O4 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 25 reflections |
| θ = 9–13° | |
| µ = 0.34 mm−1 | |
| β = 93.15 (3)° | Block, colourless |
| 0.20 × 0.20 × 0.10 mm | |
| Enraf–Nonius CAD-4 diffractometer | 1694 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.3°, θmin = 1.5° |
| ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 2248 measured reflections | 3 standard reflections every 200 reflections |
| 2113 independent reflections | intensity decay: 1% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 2113 reflections | Δρmax = 0.20 e Å−3 |
| 179 parameters | Δρmin = −0.26 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 916 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.07 (14) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.35368 (14) | −0.0236 (4) | −0.21514 (8) | 0.0925 (5) | |
| O1 | 0.2854 (2) | 0.2859 (5) | 0.26692 (18) | 0.0475 (6) | |
| O2 | 0.0917 (2) | 0.0071 (5) | 0.24181 (16) | 0.0461 (6) | |
| O3 | 0.3515 (3) | 0.0218 (6) | 0.51614 (17) | 0.0568 (7) | |
| O4 | −0.0323 (3) | 0.4727 (5) | 0.3827 (2) | 0.0657 (8) | |
| N1 | 0.4522 (4) | −0.0804 (9) | 0.3700 (3) | 0.0597 (10) | |
| H1A | 0.516 (4) | −0.168 (8) | 0.397 (3) | 0.038 (10)* | |
| H1B | 0.451 (4) | −0.069 (10) | 0.305 (3) | 0.064 (13)* | |
| N2 | −0.1472 (4) | 0.0634 (7) | 0.3925 (3) | 0.0458 (7) | |
| H2A | −0.230 (4) | 0.139 (7) | 0.403 (2) | 0.034 (9)* | |
| H2B | −0.140 (5) | −0.105 (12) | 0.399 (3) | 0.071 (15)* | |
| C1 | 0.2948 (4) | 0.0470 (10) | −0.0955 (3) | 0.0573 (10) | |
| C2 | 0.3508 (5) | −0.1037 (10) | −0.0134 (3) | 0.0675 (12) | |
| H2 | 0.4179 | −0.2455 | −0.0224 | 0.081* | |
| C3 | 0.3072 (4) | −0.0438 (10) | 0.0813 (3) | 0.0618 (10) | |
| H3 | 0.3440 | −0.1476 | 0.1363 | 0.074* | |
| C4 | 0.2085 (4) | 0.1701 (7) | 0.0964 (3) | 0.0467 (9) | |
| C5 | 0.1527 (4) | 0.3126 (9) | 0.0133 (3) | 0.0614 (11) | |
| H5 | 0.0852 | 0.4541 | 0.0216 | 0.074* | |
| C6 | 0.1949 (5) | 0.2500 (11) | −0.0830 (3) | 0.0701 (12) | |
| H6 | 0.1549 | 0.3468 | −0.1387 | 0.084* | |
| C7 | 0.1632 (4) | 0.2384 (7) | 0.1998 (3) | 0.0471 (8) | |
| H7 | 0.1002 | 0.4038 | 0.1976 | 0.057* | |
| C8 | 0.2436 (3) | 0.2201 (7) | 0.3666 (2) | 0.0392 (7) | |
| H8 | 0.2264 | 0.3935 | 0.4039 | 0.047* | |
| C9 | 0.1005 (3) | 0.0548 (7) | 0.3490 (2) | 0.0378 (7) | |
| H9 | 0.1064 | −0.1248 | 0.3852 | 0.045* | |
| C10 | −0.0327 (3) | 0.2166 (7) | 0.3777 (3) | 0.0395 (8) | |
| C11 | 0.3560 (3) | 0.0449 (8) | 0.4236 (2) | 0.0423 (8) |
| Cl1 | 0.1056 (9) | 0.1139 (10) | 0.0597 (6) | −0.0231 (10) | 0.0197 (6) | −0.0196 (7) |
| O1 | 0.0522 (13) | 0.0425 (14) | 0.0473 (13) | −0.0157 (11) | −0.0015 (11) | 0.0055 (11) |
| O2 | 0.0474 (12) | 0.0375 (13) | 0.0539 (13) | −0.0122 (12) | 0.0066 (10) | −0.0116 (12) |
| O3 | 0.0565 (14) | 0.0719 (19) | 0.0423 (13) | −0.0098 (15) | 0.0051 (11) | 0.0030 (14) |
| O4 | 0.0582 (15) | 0.0206 (12) | 0.120 (2) | 0.0031 (12) | 0.0207 (14) | −0.0055 (15) |
| N1 | 0.055 (2) | 0.074 (3) | 0.050 (2) | 0.0199 (19) | −0.0040 (17) | −0.0013 (18) |
| N2 | 0.0402 (17) | 0.0289 (17) | 0.069 (2) | 0.0016 (14) | 0.0126 (14) | 0.0046 (14) |
| C1 | 0.057 (2) | 0.064 (3) | 0.051 (2) | −0.019 (2) | 0.0029 (17) | −0.008 (2) |
| C2 | 0.071 (3) | 0.065 (3) | 0.066 (3) | 0.011 (2) | −0.003 (2) | −0.019 (2) |
| C3 | 0.078 (3) | 0.058 (2) | 0.048 (2) | 0.012 (2) | −0.0093 (18) | −0.003 (2) |
| C4 | 0.049 (2) | 0.0377 (19) | 0.053 (2) | −0.0036 (16) | −0.0039 (17) | −0.0016 (16) |
| C5 | 0.057 (2) | 0.061 (3) | 0.066 (3) | 0.009 (2) | 0.0015 (19) | 0.012 (2) |
| C6 | 0.073 (3) | 0.082 (3) | 0.055 (2) | −0.005 (3) | −0.006 (2) | 0.016 (2) |
| C7 | 0.049 (2) | 0.0352 (18) | 0.057 (2) | 0.0005 (17) | −0.0044 (17) | 0.0031 (16) |
| C8 | 0.0428 (18) | 0.0303 (17) | 0.0450 (18) | −0.0061 (15) | 0.0073 (15) | −0.0031 (14) |
| C9 | 0.0388 (16) | 0.0245 (15) | 0.0500 (19) | −0.0048 (14) | 0.0021 (14) | −0.0002 (13) |
| C10 | 0.0395 (17) | 0.0312 (19) | 0.0479 (19) | −0.0016 (15) | 0.0023 (15) | 0.0005 (15) |
| C11 | 0.0343 (16) | 0.045 (2) | 0.0475 (19) | −0.0100 (16) | 0.0032 (14) | −0.0074 (17) |
| Cl1—C1 | 1.738 (4) | C2—C3 | 1.370 (5) |
| O1—C7 | 1.420 (4) | C2—H2 | 0.93 |
| O1—C8 | 1.431 (4) | C3—C4 | 1.391 (5) |
| O2—C7 | 1.415 (4) | C3—H3 | 0.93 |
| O2—C9 | 1.436 (4) | C4—C5 | 1.370 (5) |
| O3—C11 | 1.233 (4) | C4—C7 | 1.490 (5) |
| O4—C10 | 1.221 (4) | C5—C6 | 1.387 (6) |
| N1—C11 | 1.313 (5) | C5—H5 | 0.93 |
| N1—H1A | 0.79 (4) | C6—H6 | 0.93 |
| N1—H1B | 0.86 (4) | C7—H7 | 0.98 |
| N2—C10 | 1.312 (5) | C8—C11 | 1.506 (5) |
| N2—H2A | 0.86 (3) | C8—C9 | 1.550 (4) |
| N2—H2B | 0.81 (6) | C8—H8 | 0.98 |
| C1—C6 | 1.355 (6) | C9—C10 | 1.522 (4) |
| C1—C2 | 1.379 (6) | C9—H9 | 0.98 |
| C7—O1—C8 | 107.2 (2) | C5—C6—H6 | 120.2 |
| C7—O2—C9 | 105.3 (2) | O2—C7—O1 | 104.7 (3) |
| C11—N1—H1A | 120 (3) | O2—C7—C4 | 110.7 (3) |
| C11—N1—H1B | 123 (3) | O1—C7—C4 | 110.8 (3) |
| H1A—N1—H1B | 117 (4) | O2—C7—H7 | 110.2 |
| C10—N2—H2A | 122 (2) | O1—C7—H7 | 110.2 |
| C10—N2—H2B | 121 (3) | C4—C7—H7 | 110.2 |
| H2A—N2—H2B | 117 (4) | O1—C8—C11 | 111.6 (3) |
| C6—C1—C2 | 120.4 (4) | O1—C8—C9 | 104.2 (2) |
| C6—C1—Cl1 | 120.0 (3) | C11—C8—C9 | 111.0 (3) |
| C2—C1—Cl1 | 119.6 (3) | O1—C8—H8 | 109.9 |
| C3—C2—C1 | 119.7 (4) | C11—C8—H8 | 109.9 |
| C3—C2—H2 | 120.1 | C9—C8—H8 | 109.9 |
| C1—C2—H2 | 120.1 | O2—C9—C10 | 108.9 (2) |
| C2—C3—C4 | 121.0 (4) | O2—C9—C8 | 103.3 (2) |
| C2—C3—H3 | 119.5 | C10—C9—C8 | 114.0 (3) |
| C4—C3—H3 | 119.5 | O2—C9—H9 | 110.1 |
| C5—C4—C3 | 118.0 (4) | C10—C9—H9 | 110.1 |
| C5—C4—C7 | 121.2 (3) | C8—C9—H9 | 110.1 |
| C3—C4—C7 | 120.9 (3) | O4—C10—N2 | 123.2 (3) |
| C4—C5—C6 | 121.3 (4) | O4—C10—C9 | 121.2 (3) |
| C4—C5—H5 | 119.4 | N2—C10—C9 | 115.5 (3) |
| C6—C5—H5 | 119.4 | O3—C11—N1 | 123.9 (3) |
| C1—C6—C5 | 119.7 (4) | O3—C11—C8 | 119.2 (3) |
| C1—C6—H6 | 120.2 | N1—C11—C8 | 116.9 (3) |
| C6—C1—C2—C3 | −1.3 (6) | C3—C4—C7—O1 | 52.9 (5) |
| Cl1—C1—C2—C3 | 178.4 (3) | C7—O1—C8—C11 | 134.7 (3) |
| C1—C2—C3—C4 | −0.9 (7) | C7—O1—C8—C9 | 14.8 (3) |
| C2—C3—C4—C5 | 2.1 (6) | C7—O2—C9—C10 | 91.5 (3) |
| C2—C3—C4—C7 | −178.9 (4) | C7—O2—C9—C8 | −30.0 (3) |
| C3—C4—C5—C6 | −1.2 (6) | O1—C8—C9—O2 | 9.3 (3) |
| C7—C4—C5—C6 | 179.8 (4) | C11—C8—C9—O2 | −111.0 (3) |
| C2—C1—C6—C5 | 2.2 (6) | O1—C8—C9—C10 | −108.7 (3) |
| Cl1—C1—C6—C5 | −177.5 (3) | C11—C8—C9—C10 | 130.9 (3) |
| C4—C5—C6—C1 | −1.0 (7) | O2—C9—C10—O4 | −93.1 (4) |
| C9—O2—C7—O1 | 40.4 (3) | C8—C9—C10—O4 | 21.7 (5) |
| C9—O2—C7—C4 | 159.7 (3) | O2—C9—C10—N2 | 84.4 (4) |
| C8—O1—C7—O2 | −34.2 (3) | C8—C9—C10—N2 | −160.8 (3) |
| C8—O1—C7—C4 | −153.5 (3) | O1—C8—C11—O3 | 164.5 (3) |
| C5—C4—C7—O2 | 116.2 (4) | C9—C8—C11—O3 | −79.7 (4) |
| C3—C4—C7—O2 | −62.8 (4) | O1—C8—C11—N1 | −17.0 (4) |
| C5—C4—C7—O1 | −128.1 (4) | C9—C8—C11—N1 | 98.8 (4) |
| H··· | ||||
| N1—H1A···O3i | 0.79 (4) | 2.20 (4) | 2.979 (5) | 166 (4) |
| N2—H2A···O3ii | 0.87 (4) | 2.42 (3) | 3.173 (5) | 145 (3) |
| N2—H2B···O4iii | 0.81 (6) | 2.26 (6) | 3.012 (4) | 155 (4) |
| C9—H9···O4iii | 0.98 | 2.31 | 3.075 (4) | 135 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.79 (4) | 2.20 (4) | 2.979 (5) | 166 (4) |
| N2—H2 | 0.87 (4) | 2.42 (3) | 3.173 (5) | 145 (3) |
| N2—H2 | 0.81 (6) | 2.26 (6) | 3.012 (4) | 155 (4) |
| C9—H9⋯O4iii | 0.98 | 2.31 | 3.075 (4) | 135 |
Symmetry codes: (i) ; (ii) ; (iii) .