Literature DB >> 21583635

5-Fluoro-3-methyl-sulfinyl-2-phenyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(15)H(11)FO(2)S, the O atom and the methyl group of the methyl-sulfinyl substituent lie on opposite sides of the plane of the benzofuran fragment. The 2-phenyl ring is rotated out of the benzofuran plane, making a dihedral angle of 32.1 (2)°. The crystal structure is stabilized by aromatic π-π inter-actions between the benzene rings of neighbouring mol-ecules [centroid-centroid distance = 3.690 (5) Å]. In addition, the crystal structure exhibits inter-molecular C-H⋯O and C-H⋯F inter-actions.

Entities:  

Year:  2009        PMID: 21583635      PMCID: PMC2977333          DOI: 10.1107/S1600536809028189

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 5-halo-3-methyl­sulfinyl-2-phenyl-1-benzofuran derivatives, see: Choi et al. (2007a ▶,b ▶). For the biological and pharmacological activity of benzofuran compounds, see: Howlett et al. (1999 ▶); Ward (1997 ▶).

Experimental

Crystal data

C15H11FO2S M = 274.30 Monoclinic, a = 8.507 (4) Å b = 16.655 (7) Å c = 9.553 (4) Å β = 113.732 (5)° V = 1239.1 (9) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 273 K 0.20 × 0.10 × 0.10 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: none 8954 measured reflections 2251 independent reflections 1478 reflections with I > 2σ(I) R int = 0.133

Refinement

R[F 2 > 2σ(F 2)] = 0.061 wR(F 2) = 0.157 S = 1.07 2251 reflections 173 parameters H-atom parameters constrained Δρmax = 0.64 e Å−3 Δρmin = −0.34 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809028189/er2071sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809028189/er2071Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H11FO2SF(000) = 568
Mr = 274.30Dx = 1.470 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2317 reflections
a = 8.507 (4) Åθ = 2.5–26.7°
b = 16.655 (7) ŵ = 0.27 mm1
c = 9.553 (4) ÅT = 273 K
β = 113.732 (5)°Block, colourless
V = 1239.1 (9) Å30.20 × 0.10 × 0.10 mm
Z = 4
Bruker SMART CCD diffractometer1478 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.133
graphiteθmax = 25.5°, θmin = 2.5°
Detector resolution: 10.0 pixels mm-1h = −10→10
φ and ω scansk = −20→20
8954 measured reflectionsl = −11→11
2251 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.061Hydrogen site location: difference Fourier map
wR(F2) = 0.157H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0649P)2 + 1.1956P] where P = (Fo2 + 2Fc2)/3
2251 reflections(Δ/σ)max < 0.001
173 parametersΔρmax = 0.64 e Å3
0 restraintsΔρmin = −0.34 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.68313 (13)0.69115 (6)0.59163 (12)0.0254 (3)
F1.1429 (3)0.43327 (15)0.9193 (3)0.0410 (7)
O10.6667 (3)0.49692 (15)0.3511 (3)0.0239 (6)
O20.8646 (4)0.71756 (17)0.6700 (4)0.0382 (8)
C10.6897 (5)0.5933 (2)0.5247 (4)0.0195 (8)
C20.8108 (5)0.5306 (2)0.6026 (4)0.0212 (8)
C30.9321 (5)0.5180 (2)0.7509 (5)0.0255 (9)
H30.94900.55480.82890.031*
C41.0255 (5)0.4483 (3)0.7757 (5)0.0280 (9)
C51.0078 (5)0.3919 (2)0.6625 (5)0.0292 (10)
H51.07540.34580.68640.035*
C60.8909 (5)0.4045 (2)0.5168 (5)0.0275 (9)
H60.87770.36820.43880.033*
C70.7926 (5)0.4737 (2)0.4896 (4)0.0224 (8)
C80.6087 (5)0.5703 (2)0.3762 (4)0.0207 (8)
C90.4741 (5)0.6076 (2)0.2420 (4)0.0209 (8)
C100.4709 (5)0.5957 (3)0.0963 (5)0.0303 (10)
H100.55420.56400.08380.036*
C110.3445 (6)0.6311 (3)−0.0293 (5)0.0371 (11)
H110.34380.6236−0.12600.044*
C120.2182 (5)0.6779 (3)−0.0119 (5)0.0339 (10)
H120.13290.7016−0.09660.041*
C130.2205 (5)0.6887 (2)0.1312 (5)0.0269 (9)
H130.13530.71960.14280.032*
C140.3464 (5)0.6547 (2)0.2579 (5)0.0238 (9)
H140.34670.66310.35420.029*
C150.6122 (6)0.6672 (3)0.7391 (5)0.0403 (12)
H15A0.69210.63080.81040.060*
H15B0.50090.64260.69470.060*
H15C0.60550.71550.79140.060*
U11U22U33U12U13U23
S0.0240 (5)0.0220 (5)0.0278 (6)−0.0001 (4)0.0079 (4)−0.0029 (4)
F0.0295 (14)0.0525 (17)0.0367 (15)0.0104 (11)0.0086 (12)0.0157 (12)
O10.0211 (14)0.0263 (15)0.0259 (15)0.0005 (11)0.0112 (12)−0.0010 (11)
O20.0293 (17)0.0332 (17)0.048 (2)−0.0098 (13)0.0108 (15)−0.0085 (14)
C10.0155 (18)0.0189 (19)0.023 (2)0.0004 (14)0.0071 (16)0.0009 (15)
C20.0142 (19)0.026 (2)0.026 (2)−0.0018 (15)0.0110 (17)0.0027 (15)
C30.020 (2)0.031 (2)0.027 (2)−0.0018 (16)0.0115 (18)0.0017 (16)
C40.016 (2)0.040 (2)0.028 (2)0.0038 (17)0.0091 (18)0.0123 (18)
C50.027 (2)0.031 (2)0.039 (3)0.0073 (17)0.022 (2)0.0095 (18)
C60.028 (2)0.025 (2)0.036 (2)0.0015 (17)0.0193 (19)−0.0002 (17)
C70.020 (2)0.026 (2)0.026 (2)−0.0025 (15)0.0139 (18)0.0039 (16)
C80.021 (2)0.0170 (19)0.028 (2)0.0004 (15)0.0135 (17)0.0001 (15)
C90.0177 (19)0.023 (2)0.022 (2)−0.0030 (15)0.0075 (16)0.0018 (15)
C100.026 (2)0.040 (2)0.026 (2)0.0028 (18)0.0120 (19)−0.0037 (18)
C110.035 (3)0.053 (3)0.025 (2)0.000 (2)0.014 (2)0.000 (2)
C120.026 (2)0.037 (3)0.034 (3)−0.0002 (18)0.007 (2)0.0096 (18)
C130.016 (2)0.032 (2)0.034 (2)0.0027 (16)0.0114 (18)0.0044 (18)
C140.017 (2)0.029 (2)0.026 (2)−0.0027 (16)0.0107 (18)−0.0009 (16)
C150.047 (3)0.043 (3)0.044 (3)0.003 (2)0.033 (2)−0.008 (2)
S—O21.486 (3)C6—H60.9300
S—C11.760 (4)C8—C91.470 (5)
S—C151.786 (5)C9—C101.395 (5)
F—C41.357 (4)C9—C141.397 (5)
O1—C81.375 (4)C10—C111.380 (6)
O1—C71.381 (5)C10—H100.9300
C1—C81.358 (5)C11—C121.390 (6)
C1—C21.446 (5)C11—H110.9300
C2—C31.392 (5)C12—C131.372 (6)
C2—C71.398 (5)C12—H120.9300
C3—C41.373 (6)C13—C141.374 (5)
C3—H30.9300C13—H130.9300
C4—C51.393 (6)C14—H140.9300
C5—C61.363 (6)C15—H15A0.9600
C5—H50.9300C15—H15B0.9600
C6—C71.385 (5)C15—H15C0.9600
O2—S—C1106.19 (17)C1—C8—C9133.0 (3)
O2—S—C15106.3 (2)O1—C8—C9115.6 (3)
C1—S—C1598.6 (2)C10—C9—C14119.0 (4)
C8—O1—C7106.0 (3)C10—C9—C8120.4 (3)
C8—C1—C2106.9 (3)C14—C9—C8120.6 (3)
C8—C1—S124.3 (3)C11—C10—C9120.2 (4)
C2—C1—S127.0 (3)C11—C10—H10119.9
C3—C2—C7119.4 (4)C9—C10—H10119.9
C3—C2—C1135.7 (4)C10—C11—C12120.3 (4)
C7—C2—C1104.9 (3)C10—C11—H11119.8
C4—C3—C2116.3 (4)C12—C11—H11119.8
C4—C3—H3121.9C13—C12—C11119.4 (4)
C2—C3—H3121.9C13—C12—H12120.3
F—C4—C3118.0 (4)C11—C12—H12120.3
F—C4—C5117.8 (4)C12—C13—C14121.1 (4)
C3—C4—C5124.2 (4)C12—C13—H13119.5
C6—C5—C4119.7 (4)C14—C13—H13119.5
C6—C5—H5120.2C13—C14—C9120.0 (4)
C4—C5—H5120.2C13—C14—H14120.0
C5—C6—C7117.2 (4)C9—C14—H14120.0
C5—C6—H6121.4S—C15—H15A109.5
C7—C6—H6121.4S—C15—H15B109.5
O1—C7—C6126.1 (4)H15A—C15—H15B109.5
O1—C7—C2110.6 (3)S—C15—H15C109.5
C6—C7—C2123.3 (4)H15A—C15—H15C109.5
C1—C8—O1111.5 (3)H15B—C15—H15C109.5
O2—S—C1—C8−123.7 (3)C3—C2—C7—C6−0.5 (6)
C15—S—C1—C8126.4 (4)C1—C2—C7—C6177.9 (3)
O2—S—C1—C239.2 (4)C2—C1—C8—O10.4 (4)
C15—S—C1—C2−70.7 (4)S—C1—C8—O1166.2 (3)
C8—C1—C2—C3178.7 (4)C2—C1—C8—C9179.9 (4)
S—C1—C2—C313.4 (6)S—C1—C8—C9−14.3 (6)
C8—C1—C2—C70.6 (4)C7—O1—C8—C1−1.3 (4)
S—C1—C2—C7−164.6 (3)C7—O1—C8—C9179.1 (3)
C7—C2—C3—C4−0.8 (5)C1—C8—C9—C10147.8 (4)
C1—C2—C3—C4−178.6 (4)O1—C8—C9—C10−32.7 (5)
C2—C3—C4—F−178.9 (3)C1—C8—C9—C14−32.9 (6)
C2—C3—C4—C51.3 (6)O1—C8—C9—C14146.6 (3)
F—C4—C5—C6179.8 (3)C14—C9—C10—C110.8 (6)
C3—C4—C5—C6−0.4 (6)C8—C9—C10—C11−179.8 (4)
C4—C5—C6—C7−1.0 (6)C9—C10—C11—C12−0.8 (7)
C8—O1—C7—C6−177.6 (4)C10—C11—C12—C130.1 (7)
C8—O1—C7—C21.7 (4)C11—C12—C13—C140.6 (6)
C5—C6—C7—O1−179.3 (3)C12—C13—C14—C9−0.6 (6)
C5—C6—C7—C21.4 (6)C10—C9—C14—C13−0.1 (6)
C3—C2—C7—O1−179.9 (3)C8—C9—C14—C13−179.5 (3)
C1—C2—C7—O1−1.5 (4)
D—H···AD—HH···AD···AD—H···A
C5—H5···O2i0.932.483.282 (5)145
C12—H12···O2ii0.932.483.371 (5)160
C13—H13···O2iii0.932.643.555 (5)170
C15—H15B···O1iv0.962.673.493 (6)144
C15—H15A···Fv0.962.623.509 (6)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯O2i0.932.483.282 (5)145
C12—H12⋯O2ii0.932.483.371 (5)160
C13—H13⋯O2iii0.932.643.555 (5)170
C15—H15B⋯O1iv0.962.673.493 (6)144
C15—H15A⋯Fv0.962.623.509 (6)155

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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