Literature DB >> 21583581

Adamantane-1-thio-amide.

Maryam Zahid, M Khawar Rauf, Michael Bolte, Shahid Hameed.   

Abstract

The title compound, C(11)H(17)NS, is an important inter-mediate for the synthesis of biologically active adamantlythia-zolo-oxadiazo-les. The n class="Chemical">adamantyl residue is disordered about a twofold rotation axis over two sites with site-occupation factors of 0.817 (3) and 0.183 (3). The crystal structure is stabilized by inter-molecular N-H⋯S hydrogen-bonding inter-actions.

Entities:  

Year:  2009        PMID: 21583581      PMCID: PMC2977118          DOI: 10.1107/S1600536809027470

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Adamantane derivatives include well known drugs such as n class="Chemical">Rimantadine, Memantine, Adapalene and Adatanserin, see: Krasnikov et al. (2004 ▶). For their biological activity, see: Singh et al. (2007 ▶); Wennekes et al. (2007 ▶); Inaba et al. (2007 ▶); Kolocouris et al. (2007 ▶). Thio­amides are not only widely used as fungicides (Klimesova et al., 1999 ▶) and herbicides (Bahadir et al., 1979 ▶) but are also valuable inter­mediates in the synthesis of heterocyclic compounds (Jagodzinski, 2003 ▶). For the synthesis of the title compound, see: Kaboudin & Elhamifar (2006 ▶).

Experimental

Crystal data

C11H17NS M = 195.32 Monoclinic, a = 24.255 (2) Å b = 7.9879 (5) Å c = 11.2928 (9) Å β = 100.859 (7)° V = 2148.8 (3) Å3 Z = 8 Mo Kα radiation μ = 0.26 mm−1 T = 173 K 0.39 × 0.26 × 0.25 mm

Data collection

Stoe IPDS-II two-circle diffractometer Absorption correction: multi-scan (MULABS; Spek, 2009 ▶; Blessing, 1995 ▶) T min = 0.907, T max = 0.939 7423 measured reflections 2002 independent reflections 1703 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.103 S = 1.07 2002 reflections 163 parameters 35 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.30 e Å−3 Data collection: X-AREA (Stoe & Cie, 2001 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL-Plus (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809027470/hg2536sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809027470/hg2536Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H17NSF(000) = 848
Mr = 195.32Dx = 1.208 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 7109 reflections
a = 24.255 (2) Åθ = 3.5–25.9°
b = 7.9879 (5) ŵ = 0.26 mm1
c = 11.2928 (9) ÅT = 173 K
β = 100.859 (7)°Block, colourless
V = 2148.8 (3) Å30.39 × 0.26 × 0.25 mm
Z = 8
Stoe IPDS-II two-circle diffractometer2002 independent reflections
Radiation source: fine-focus sealed tube1703 reflections with I > 2σ(I)
graphiteRint = 0.040
ω scansθmax = 25.5°, θmin = 3.4°
Absorption correction: multi-scan (MULABS; Spek, 2009; Blessing, 1995)h = −29→29
Tmin = 0.907, Tmax = 0.939k = −9→8
7423 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.0572P)2 + 0.6628P] where P = (Fo2 + 2Fc2)/3
2002 reflections(Δ/σ)max < 0.001
163 parametersΔρmax = 0.20 e Å3
35 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
S10.21599 (2)0.61925 (7)0.64064 (3)0.0548 (2)
N10.20667 (6)0.55153 (18)0.41220 (11)0.0355 (3)
H1A0.1949 (7)0.495 (2)0.3461 (12)0.041 (5)*
H1B0.2299 (7)0.6339 (18)0.4094 (17)0.044 (5)*
C10.19018 (6)0.51441 (19)0.51351 (12)0.0307 (3)
C20.14709 (6)0.37457 (18)0.51046 (12)0.0280 (3)
C30.09531 (7)0.4503 (2)0.55352 (17)0.0346 (5)0.817 (2)
H3A0.10710.49950.63480.041*0.817 (2)
H3B0.07890.54060.49780.041*0.817 (2)
C40.05109 (9)0.3143 (4)0.5574 (2)0.0449 (6)0.817 (2)
H40.01790.36400.58550.054*0.817 (2)
C50.03278 (11)0.2407 (4)0.4326 (2)0.0535 (7)0.817 (2)
H5A0.00400.15350.43460.064*0.817 (2)
H5B0.01590.32940.37600.064*0.817 (2)
C60.08243 (15)0.1650 (4)0.3893 (3)0.0553 (10)0.817 (2)
H60.06970.11720.30680.066*0.817 (2)
C70.12688 (9)0.3016 (3)0.38385 (17)0.0424 (5)0.817 (2)
H7A0.15910.25290.35340.051*0.817 (2)
H7B0.11040.39160.32790.051*0.817 (2)
C80.17150 (8)0.2349 (3)0.59767 (19)0.0401 (5)0.817 (2)
H8A0.18420.28210.67930.048*0.817 (2)
H8B0.20440.18450.57090.048*0.817 (2)
C90.07646 (14)0.1784 (3)0.6434 (2)0.0466 (6)0.817 (2)
H9A0.04790.09130.64790.056*0.817 (2)
H9B0.08840.22630.72510.056*0.817 (2)
C100.10857 (13)0.0264 (3)0.4743 (3)0.0591 (7)0.817 (2)
H10A0.1415−0.02100.44600.071*0.817 (2)
H10B0.0809−0.06450.47560.071*0.817 (2)
C110.12686 (11)0.0991 (3)0.6021 (2)0.0493 (6)0.817 (2)
H110.14290.00840.65940.059*0.817 (2)
C3'0.0918 (3)0.4290 (11)0.4335 (8)0.037 (2)*0.183 (2)
H3'10.09800.46100.35230.045*0.183 (2)
H3'20.07740.52840.47030.045*0.183 (2)
C4'0.0475 (5)0.2869 (14)0.4214 (10)0.046 (3)*0.183 (2)
H4'0.01090.32380.37210.055*0.183 (2)
C5'0.0714 (5)0.1404 (17)0.3637 (12)0.040 (4)*0.183 (2)
H5'10.04290.05030.34890.048*0.183 (2)
H5'20.07940.17580.28460.048*0.183 (2)
C6'0.1241 (4)0.0722 (14)0.4391 (9)0.043 (3)*0.183 (2)
H6'0.1372−0.02830.39940.052*0.183 (2)
C7'0.1683 (3)0.2123 (10)0.4505 (8)0.039 (2)*0.183 (2)
H7'10.17570.24080.36960.046*0.183 (2)
H7'20.20390.17270.50060.046*0.183 (2)
C8'0.1384 (3)0.3213 (10)0.6373 (7)0.0338 (19)*0.183 (2)
H8'10.12440.41790.67780.041*0.183 (2)
H8'20.17490.28650.68620.041*0.183 (2)
C9'0.0414 (5)0.2430 (18)0.5496 (11)0.057 (4)*0.183 (2)
H9'10.01120.15850.54600.068*0.183 (2)
H9'20.02950.34450.58850.068*0.183 (2)
C10'0.1166 (5)0.0295 (15)0.5663 (11)0.045 (3)*0.183 (2)
H10C0.0897−0.06450.56260.055*0.183 (2)
H10D0.1530−0.00840.61360.055*0.183 (2)
C11'0.0957 (5)0.1737 (16)0.6295 (11)0.041 (4)*0.183 (2)
H11'0.08920.14080.71120.049*0.183 (2)
U11U22U33U12U13U23
S10.0758 (4)0.0683 (4)0.0212 (2)−0.0451 (3)0.01175 (19)−0.00661 (18)
N10.0424 (7)0.0430 (8)0.0228 (6)−0.0139 (6)0.0104 (5)−0.0023 (6)
C10.0332 (7)0.0362 (8)0.0227 (7)−0.0052 (6)0.0053 (5)0.0032 (6)
C20.0324 (7)0.0308 (8)0.0207 (6)−0.0046 (6)0.0048 (5)0.0004 (5)
C30.0337 (9)0.0358 (10)0.0338 (10)−0.0021 (8)0.0052 (7)−0.0008 (8)
C40.0373 (11)0.0496 (16)0.0490 (13)−0.0057 (11)0.0111 (9)−0.0014 (11)
C50.0488 (15)0.0577 (16)0.0497 (15)−0.0226 (13)−0.0013 (11)0.0048 (12)
C60.078 (2)0.0540 (17)0.0329 (14)−0.0292 (15)0.0086 (13)−0.0115 (12)
C70.0573 (12)0.0448 (12)0.0262 (9)−0.0168 (9)0.0111 (8)−0.0075 (8)
C80.0404 (11)0.0374 (11)0.0406 (11)0.0012 (8)0.0025 (8)0.0096 (9)
C90.0510 (16)0.0478 (15)0.0425 (13)−0.0167 (12)0.0124 (12)0.0020 (10)
C100.0797 (18)0.0336 (13)0.0666 (19)−0.0123 (12)0.0206 (15)−0.0110 (12)
C110.0638 (15)0.0329 (12)0.0483 (13)−0.0030 (11)0.0032 (11)0.0106 (11)
S1—C11.6780 (14)C9—H9B0.9900
N1—C11.3149 (19)C10—C111.542 (4)
N1—H1A0.874 (9)C10—H10A0.9900
N1—H1B0.870 (9)C10—H10B0.9900
C1—C21.5257 (19)C11—H111.0000
C2—C3'1.518 (7)C3'—C4'1.550 (12)
C2—C81.532 (2)C3'—H3'10.9900
C2—C71.536 (2)C3'—H3'20.9900
C2—C8'1.546 (8)C4'—C5'1.507 (14)
C2—C31.552 (2)C4'—C9'1.524 (14)
C2—C7'1.592 (8)C4'—H4'1.0000
C3—C41.533 (3)C5'—C6'1.498 (13)
C3—H3A0.9900C5'—H5'10.9900
C3—H3B0.9900C5'—H5'20.9900
C4—C91.509 (4)C6'—C10'1.521 (13)
C4—C51.515 (3)C6'—C7'1.538 (12)
C4—H41.0000C6'—H6'1.0000
C5—C61.509 (5)C7'—H7'10.9900
C5—H5A0.9900C7'—H7'20.9900
C5—H5B0.9900C8'—C11'1.561 (12)
C6—C101.523 (4)C8'—H8'10.9900
C6—C71.543 (4)C8'—H8'20.9900
C6—H61.0000C9'—C11'1.553 (14)
C7—H7A0.9900C9'—H9'10.9900
C7—H7B0.9900C9'—H9'20.9900
C8—C111.540 (3)C10'—C11'1.492 (13)
C8—H8A0.9900C10'—H10C0.9900
C8—H8B0.9900C10'—H10D0.9900
C9—C111.526 (4)C11'—H11'1.0000
C9—H9A0.9900
C1—N1—H1A121.5 (13)H9A—C9—H9B108.1
C1—N1—H1B120.4 (13)C6—C10—C11109.2 (2)
H1A—N1—H1B118.0 (18)C6—C10—H10A109.8
N1—C1—C2117.69 (13)C11—C10—H10A109.8
N1—C1—S1120.42 (11)C6—C10—H10B109.8
C2—C1—S1121.89 (11)C11—C10—H10B109.8
C3'—C2—C1109.3 (3)H10A—C10—H10B108.3
C3'—C2—C8140.3 (3)C9—C11—C8109.1 (2)
C1—C2—C8109.80 (12)C9—C11—C10109.7 (2)
C3'—C2—C758.9 (4)C8—C11—C10108.4 (2)
C1—C2—C7113.32 (13)C9—C11—H11109.9
C8—C2—C7109.82 (15)C8—C11—H11109.9
C3'—C2—C8'110.5 (4)C10—C11—H11109.9
C1—C2—C8'113.1 (3)C2—C3'—C4'111.3 (7)
C8—C2—C8'46.1 (3)C2—C3'—H3'1109.4
C7—C2—C8'133.0 (3)C4'—C3'—H3'1109.4
C3'—C2—C352.3 (4)C2—C3'—H3'2109.4
C1—C2—C3107.40 (13)C4'—C3'—H3'2109.4
C8—C2—C3108.66 (14)H3'1—C3'—H3'2108.0
C7—C2—C3107.70 (14)C5'—C4'—C9'110.3 (10)
C8'—C2—C363.8 (3)C5'—C4'—C3'106.9 (9)
C3'—C2—C7'108.1 (5)C9'—C4'—C3'106.0 (9)
C1—C2—C7'109.3 (3)C5'—C4'—H4'111.2
C8—C2—C7'64.1 (3)C9'—C4'—H4'111.2
C7—C2—C7'50.8 (3)C3'—C4'—H4'111.2
C8'—C2—C7'106.3 (5)C6'—C5'—C4'113.1 (10)
C3—C2—C7'142.7 (3)C6'—C5'—H5'1109.0
C4—C3—C2110.17 (16)C4'—C5'—H5'1109.0
C4—C3—H3A109.6C6'—C5'—H5'2109.0
C2—C3—H3A109.6C4'—C5'—H5'2109.0
C4—C3—H3B109.6H5'1—C5'—H5'2107.8
C2—C3—H3B109.6C5'—C6'—C10'112.2 (10)
H3A—C3—H3B108.1C5'—C6'—C7'106.9 (9)
C9—C4—C5109.4 (2)C10'—C6'—C7'106.8 (8)
C9—C4—C3109.02 (19)C5'—C6'—H6'110.3
C5—C4—C3109.4 (2)C10'—C6'—H6'110.3
C9—C4—H4109.7C7'—C6'—H6'110.3
C5—C4—H4109.7C6'—C7'—C2110.6 (6)
C3—C4—H4109.7C6'—C7'—H7'1109.5
C6—C5—C4110.2 (2)C2—C7'—H7'1109.5
C6—C5—H5A109.6C6'—C7'—H7'2109.5
C4—C5—H5A109.6C2—C7'—H7'2109.5
C6—C5—H5B109.6H7'1—C7'—H7'2108.1
C4—C5—H5B109.6C2—C8'—C11'111.1 (6)
H5A—C5—H5B108.1C2—C8'—H8'1109.4
C5—C6—C10110.5 (3)C11'—C8'—H8'1109.4
C5—C6—C7109.6 (2)C2—C8'—H8'2109.4
C10—C6—C7109.2 (3)C11'—C8'—H8'2109.4
C5—C6—H6109.2H8'1—C8'—H8'2108.0
C10—C6—H6109.2C4'—C9'—C11'114.2 (10)
C7—C6—H6109.2C4'—C9'—H9'1108.7
C2—C7—C6109.51 (17)C11'—C9'—H9'1108.7
C2—C7—H7A109.8C4'—C9'—H9'2108.7
C6—C7—H7A109.8C11'—C9'—H9'2108.7
C2—C7—H7B109.8H9'1—C9'—H9'2107.6
C6—C7—H7B109.8C11'—C10'—C6'112.9 (9)
H7A—C7—H7B108.2C11'—C10'—H10C109.0
C2—C8—C11110.19 (15)C6'—C10'—H10C109.0
C2—C8—H8A109.6C11'—C10'—H10D109.0
C11—C8—H8A109.6C6'—C10'—H10D109.0
C2—C8—H8B109.6H10C—C10'—H10D107.8
C11—C8—H8B109.6C10'—C11'—C9'108.9 (10)
H8A—C8—H8B108.1C10'—C11'—C8'109.2 (10)
C4—C9—C11110.8 (2)C9'—C11'—C8'104.2 (9)
C4—C9—H9A109.5C10'—C11'—H11'111.4
C11—C9—H9A109.5C9'—C11'—H11'111.4
C4—C9—H9B109.5C8'—C11'—H11'111.4
C11—C9—H9B109.5
N1—C1—C2—C3'−66.3 (4)C4—C9—C11—C860.1 (3)
S1—C1—C2—C3'113.5 (4)C4—C9—C11—C10−58.4 (3)
N1—C1—C2—C8120.45 (17)C2—C8—C11—C9−59.3 (2)
S1—C1—C2—C8−59.78 (17)C2—C8—C11—C1060.1 (2)
N1—C1—C2—C7−2.7 (2)C6—C10—C11—C957.2 (3)
S1—C1—C2—C7177.02 (13)C6—C10—C11—C8−61.8 (3)
N1—C1—C2—C8'170.1 (4)C1—C2—C3'—C4'176.7 (6)
S1—C1—C2—C8'−10.1 (4)C8—C2—C3'—C4'−13.3 (10)
N1—C1—C2—C3−121.57 (16)C7—C2—C3'—C4'70.5 (7)
S1—C1—C2—C358.20 (16)C8'—C2—C3'—C4'−58.2 (8)
N1—C1—C2—C7'51.9 (4)C3—C2—C3'—C4'−85.9 (7)
S1—C1—C2—C7'−128.3 (3)C7'—C2—C3'—C4'57.8 (8)
C3'—C2—C3—C480.9 (4)C2—C3'—C4'—C5'−59.7 (10)
C1—C2—C3—C4−177.77 (14)C2—C3'—C4'—C9'57.9 (10)
C8—C2—C3—C4−59.06 (18)C9'—C4'—C5'—C6'−51.8 (15)
C7—C2—C3—C459.85 (19)C3'—C4'—C5'—C6'63.0 (13)
C8'—C2—C3—C4−70.1 (4)C4'—C5'—C6'—C10'53.5 (15)
C7'—C2—C3—C412.4 (6)C4'—C5'—C6'—C7'−63.2 (13)
C2—C3—C4—C959.8 (2)C5'—C6'—C7'—C258.7 (10)
C2—C3—C4—C5−59.8 (2)C10'—C6'—C7'—C2−61.6 (9)
C9—C4—C5—C6−59.6 (3)C3'—C2—C7'—C6'−57.6 (8)
C3—C4—C5—C659.8 (3)C1—C2—C7'—C6'−176.6 (6)
C4—C5—C6—C1060.0 (3)C8—C2—C7'—C6'80.2 (6)
C4—C5—C6—C7−60.3 (3)C7—C2—C7'—C6'−71.8 (6)
C3'—C2—C7—C6−79.3 (4)C8'—C2—C7'—C6'61.0 (7)
C1—C2—C7—C6−178.50 (19)C3—C2—C7'—C6'−6.9 (10)
C8—C2—C7—C658.3 (2)C3'—C2—C8'—C11'59.2 (8)
C8'—C2—C7—C610.5 (5)C1—C2—C8'—C11'−177.9 (6)
C3—C2—C7—C6−59.9 (2)C8—C2—C8'—C11'−82.1 (7)
C7'—C2—C7—C685.0 (4)C7—C2—C8'—C11'−6.8 (9)
C5—C6—C7—C261.0 (3)C3—C2—C8'—C11'83.4 (7)
C10—C6—C7—C2−60.2 (3)C7'—C2—C8'—C11'−57.9 (8)
C3'—C2—C8—C115.9 (6)C5'—C4'—C9'—C11'52.5 (15)
C1—C2—C8—C11175.91 (18)C3'—C4'—C9'—C11'−62.8 (13)
C7—C2—C8—C11−58.9 (2)C5'—C6'—C10'—C11'−55.3 (13)
C8'—C2—C8—C1172.4 (4)C7'—C6'—C10'—C11'61.5 (11)
C3—C2—C8—C1158.7 (2)C6'—C10'—C11'—C9'53.7 (13)
C7'—C2—C8—C11−81.6 (4)C6'—C10'—C11'—C8'−59.5 (12)
C5—C4—C9—C1159.2 (3)C4'—C9'—C11'—C10'−53.6 (14)
C3—C4—C9—C11−60.5 (3)C4'—C9'—C11'—C8'62.9 (13)
C5—C6—C10—C11−58.5 (3)C2—C8'—C11'—C10'58.0 (10)
C7—C6—C10—C1162.1 (3)C2—C8'—C11'—C9'−58.2 (10)
D—H···AD—HH···AD···AD—H···A
N1—H1A···S1i0.87 (1)2.63 (1)3.4027 (14)148 (2)
N1—H1B···S1ii0.87 (1)2.49 (1)3.3485 (14)168 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯S1i0.874 (9)2.631 (13)3.4027 (14)147.9 (16)
N1—H1B⋯S1ii0.870 (9)2.492 (10)3.3485 (14)168.1 (17)

Symmetry codes: (i) ; (ii) .

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