Literature DB >> 21583544

N,N,N,N-Tetra-ethyl-6-{2-[(E)-1-(4-nitro-phen-yl)ethyl-idene]hydrazino}-1,3,5-triazine-2,4-diamine.

Xiao-Ru Pan, Fang-Fang Jian.   

Abstract

The title compound, C(19)H(28)N(8)O(2), was prepared by the reaction of N(2),N(2),N(4),N(4)-tetra-ethyl-6-hydrazino-1,3,5-triazine-2,4-diamine and 1-(4-nitro-phen-yl)ethanone in ethanol at room temperature. The mol-ecular conformation is stabilized by intra-molecular C-H⋯N hydrogen-bonding inter-actions. There are also inter-molecular N-H⋯O hydrogen bonds, and C-H⋯π and π-π inter-actions, which help to stabilize the crystal structure. The centroid-centroid distance is 3.6172 (10) Å between adjacent benzene and 1,3,5-triazine rings.

Entities:  

Year:  2009        PMID: 21583544      PMCID: PMC2977253          DOI: 10.1107/S1600536809025677

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the antimicrobial and anticancer applications of Schiff bases, see: Tarafder et al. (2000 ▶); Deschamps et al. (2003 ▶). For the ability of Schiff bases to form intramolecular hydrogen bonds by electron coupling between acid–base centers, see: Rozwadowski et al. (1999 ▶). For a related structure, see: Jian et al. (2006 ▶).

Experimental

Crystal data

C19H28N8O2 M = 400.49 Monoclinic, a = 12.333 (3) Å b = 9.5286 (19) Å c = 17.407 (4) Å β = 92.12 (3)° V = 2044.3 (7) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.22 × 0.18 × 0.10 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: none 19318 measured reflections 4667 independent reflections 4054 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.104 S = 1.05 4667 reflections 278 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.35 e Å−3 Δρmin = −0.24 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809025677/at2835sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809025677/at2835Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H28N8O2F(000) = 856
Mr = 400.49Dx = 1.301 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4667 reflections
a = 12.333 (3) Åθ = 3.2–27.5°
b = 9.5286 (19) ŵ = 0.09 mm1
c = 17.407 (4) ÅT = 293 K
β = 92.12 (3)°Block, yellow
V = 2044.3 (7) Å30.22 × 0.18 × 0.10 mm
Z = 4
Bruker SMART CCD area-detector diffractometer4054 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.018
graphiteθmax = 27.5°, θmin = 3.2°
φ and ω scansh = −16→15
19318 measured reflectionsk = −12→12
4667 independent reflectionsl = −22→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.104H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0544P)2 + 0.6629P] where P = (Fo2 + 2Fc2)/3
4667 reflections(Δ/σ)max = 0.001
278 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N60.86798 (7)0.13524 (9)0.14238 (5)0.01620 (18)
O20.61084 (7)−0.21575 (10)−0.26492 (5)0.0282 (2)
O10.71950 (7)−0.38030 (9)−0.29988 (5)0.02543 (19)
N30.97484 (7)−0.06303 (10)0.12715 (5)0.01717 (19)
N50.91414 (7)0.28722 (9)0.24899 (5)0.01601 (19)
N41.01161 (7)0.07162 (9)0.23260 (5)0.01529 (18)
N71.05089 (7)0.22043 (9)0.33480 (5)0.01625 (19)
N20.91687 (7)−0.09648 (9)0.06200 (5)0.01611 (19)
C190.75621 (8)−0.27251 (11)−0.18232 (6)0.0168 (2)
N10.69125 (7)−0.29130 (10)−0.25356 (5)0.0200 (2)
N80.77480 (7)0.34066 (10)0.16191 (5)0.01862 (19)
C150.79067 (8)−0.14525 (11)−0.06617 (6)0.0180 (2)
H15A0.7718−0.0751−0.03200.022*
C110.94887 (8)0.05417 (11)0.16864 (6)0.0146 (2)
C160.88343 (8)−0.22754 (11)−0.04984 (6)0.0148 (2)
C170.90831 (8)−0.33498 (11)−0.10124 (6)0.0168 (2)
H17A0.9682−0.3920−0.09050.020*
C100.99015 (8)0.19185 (11)0.27004 (6)0.0145 (2)
C180.84541 (8)−0.35806 (11)−0.16793 (6)0.0175 (2)
H18A0.8628−0.4291−0.20200.021*
C120.95244 (8)−0.19665 (11)0.01989 (6)0.0151 (2)
C140.72719 (8)−0.16701 (12)−0.13212 (6)0.0188 (2)
H14A0.6662−0.1120−0.14270.023*
C90.85476 (8)0.25133 (11)0.18551 (6)0.0154 (2)
C21.13661 (8)0.12427 (11)0.36176 (6)0.0168 (2)
H2B1.19370.17800.38790.020*
H2C1.16760.07930.31760.020*
C131.05659 (10)−0.27421 (13)0.03706 (7)0.0226 (2)
C31.02715 (9)0.34442 (12)0.38092 (6)0.0200 (2)
H3D1.01630.42410.34680.024*
H3E1.08960.36460.41460.024*
C60.69842 (9)0.30243 (12)0.09900 (6)0.0217 (2)
H6B0.73670.25110.06020.026*
H6C0.66920.38720.07540.026*
C70.75666 (9)0.47314 (12)0.20190 (7)0.0212 (2)
H7A0.77530.46150.25620.025*
H7B0.68040.49750.19700.025*
C40.92728 (10)0.32834 (14)0.42962 (7)0.0270 (3)
H4B0.91650.41300.45820.040*
H4C0.93800.25120.46460.040*
H4D0.86460.31070.39670.040*
C50.60582 (10)0.21306 (14)0.12663 (8)0.0320 (3)
H5B0.55770.19010.08390.048*
H5C0.56680.26420.16430.048*
H5D0.63440.12830.14920.048*
C80.82384 (11)0.59180 (13)0.16992 (8)0.0321 (3)
H8A0.80990.67670.19760.048*
H8B0.80450.60500.11650.048*
H8C0.89950.56870.17550.048*
C11.09742 (10)0.01179 (12)0.41592 (7)0.0244 (2)
H1A1.1571−0.04780.43140.037*
H1B1.0420−0.04330.39010.037*
H1C1.06840.05530.46050.037*
H13A1.0787 (13)−0.3377 (19)−0.0021 (10)0.043 (5)*
H13B1.0561 (14)−0.325 (2)0.0845 (11)0.050 (5)*
H13C1.1172 (14)−0.2076 (19)0.0445 (10)0.046 (5)*
H3A1.0310 (12)−0.1104 (16)0.1438 (8)0.027 (4)*
U11U22U33U12U13U23
N60.0158 (4)0.0174 (4)0.0152 (4)0.0012 (3)−0.0017 (3)−0.0008 (3)
O20.0243 (4)0.0356 (5)0.0240 (4)0.0003 (3)−0.0093 (3)0.0004 (4)
O10.0308 (4)0.0284 (4)0.0169 (4)−0.0089 (3)−0.0008 (3)−0.0064 (3)
N30.0177 (4)0.0185 (4)0.0148 (4)0.0038 (3)−0.0056 (3)−0.0029 (3)
N50.0152 (4)0.0170 (4)0.0157 (4)0.0002 (3)−0.0001 (3)−0.0017 (3)
N40.0152 (4)0.0170 (4)0.0135 (4)0.0000 (3)−0.0011 (3)−0.0009 (3)
N70.0160 (4)0.0182 (4)0.0143 (4)0.0002 (3)−0.0022 (3)−0.0035 (3)
N20.0176 (4)0.0173 (4)0.0132 (4)−0.0008 (3)−0.0031 (3)−0.0010 (3)
C190.0178 (5)0.0198 (5)0.0125 (5)−0.0063 (4)−0.0017 (4)0.0007 (4)
N10.0208 (4)0.0233 (5)0.0156 (4)−0.0085 (4)−0.0025 (3)0.0010 (4)
N80.0173 (4)0.0187 (4)0.0196 (4)0.0037 (3)−0.0027 (3)−0.0018 (4)
C150.0192 (5)0.0177 (5)0.0171 (5)0.0014 (4)−0.0011 (4)−0.0035 (4)
C110.0145 (4)0.0161 (5)0.0133 (5)−0.0014 (4)0.0004 (4)0.0002 (4)
C160.0161 (5)0.0149 (5)0.0132 (5)−0.0017 (4)0.0000 (4)0.0010 (4)
C170.0166 (5)0.0161 (5)0.0179 (5)0.0003 (4)0.0008 (4)−0.0003 (4)
C100.0131 (4)0.0173 (5)0.0132 (5)−0.0028 (4)0.0017 (4)0.0003 (4)
C180.0199 (5)0.0166 (5)0.0162 (5)−0.0033 (4)0.0024 (4)−0.0037 (4)
C120.0164 (5)0.0154 (5)0.0134 (5)0.0000 (4)−0.0007 (4)0.0009 (4)
C140.0173 (5)0.0198 (5)0.0190 (5)0.0008 (4)−0.0025 (4)0.0005 (4)
C90.0141 (5)0.0170 (5)0.0150 (5)−0.0009 (4)0.0016 (4)0.0013 (4)
C20.0148 (5)0.0203 (5)0.0150 (5)−0.0008 (4)−0.0027 (4)−0.0009 (4)
C130.0232 (6)0.0256 (6)0.0185 (5)0.0084 (4)−0.0052 (4)−0.0043 (4)
C30.0209 (5)0.0204 (5)0.0184 (5)−0.0010 (4)−0.0028 (4)−0.0064 (4)
C60.0205 (5)0.0249 (6)0.0192 (5)0.0062 (4)−0.0054 (4)−0.0004 (4)
C70.0197 (5)0.0202 (5)0.0237 (5)0.0062 (4)0.0011 (4)−0.0026 (4)
C40.0279 (6)0.0320 (6)0.0213 (6)0.0027 (5)0.0039 (5)−0.0068 (5)
C50.0251 (6)0.0302 (7)0.0398 (7)−0.0021 (5)−0.0131 (5)0.0053 (5)
C80.0366 (7)0.0212 (6)0.0388 (7)0.0008 (5)0.0071 (6)−0.0016 (5)
C10.0276 (6)0.0234 (6)0.0223 (5)−0.0002 (4)0.0028 (4)0.0026 (4)
N6—C111.3294 (13)C12—C131.5023 (14)
N6—C91.3502 (14)C14—H14A0.9300
O2—N11.2354 (13)C2—C11.5182 (15)
O1—N11.2295 (13)C2—H2B0.9700
N3—N21.3562 (12)C2—H2C0.9700
N3—C111.3742 (14)C13—H13A0.958 (18)
N3—H3A0.868 (15)C13—H13B0.96 (2)
N5—C101.3466 (13)C13—H13C0.986 (18)
N5—C91.3470 (14)C3—C41.5285 (17)
N4—C111.3426 (13)C3—H3D0.9700
N4—C101.3490 (14)C3—H3E0.9700
N7—C101.3578 (13)C6—C51.5170 (18)
N7—C21.4632 (13)C6—H6B0.9700
N7—C31.4641 (13)C6—H6C0.9700
N2—C121.2902 (14)C7—C81.5195 (17)
C19—C181.3846 (15)C7—H7A0.9700
C19—C141.3876 (15)C7—H7B0.9700
C19—N11.4623 (13)C4—H4B0.9600
N8—C91.3549 (13)C4—H4C0.9600
N8—C71.4628 (14)C4—H4D0.9600
N8—C61.4639 (14)C5—H5B0.9600
C15—C141.3811 (15)C5—H5C0.9600
C15—C161.4072 (14)C5—H5D0.9600
C15—H15A0.9300C8—H8A0.9600
C16—C171.4011 (14)C8—H8B0.9600
C16—C121.4860 (14)C8—H8C0.9600
C17—C181.3897 (15)C1—H1A0.9600
C17—H17A0.9300C1—H1B0.9600
C18—H18A0.9300C1—H1C0.9600
C11—N6—C9112.92 (9)C1—C2—H2C108.9
N2—N3—C11120.30 (9)H2B—C2—H2C107.7
N2—N3—H3A123.2 (10)C12—C13—H13A115.6 (10)
C11—N3—H3A116.5 (10)C12—C13—H13B112.8 (11)
C10—N5—C9113.82 (9)H13A—C13—H13B108.0 (15)
C11—N4—C10112.86 (9)C12—C13—H13C110.4 (10)
C10—N7—C2120.71 (9)H13A—C13—H13C105.4 (14)
C10—N7—C3120.12 (9)H13B—C13—H13C103.7 (15)
C2—N7—C3119.08 (8)N7—C3—C4113.88 (9)
C12—N2—N3117.98 (9)N7—C3—H3D108.8
C18—C19—C14122.29 (9)C4—C3—H3D108.8
C18—C19—N1119.22 (10)N7—C3—H3E108.8
C14—C19—N1118.47 (10)C4—C3—H3E108.8
O1—N1—O2122.83 (9)H3D—C3—H3E107.7
O1—N1—C19118.75 (9)N8—C6—C5111.95 (10)
O2—N1—C19118.42 (9)N8—C6—H6B109.2
C9—N8—C7121.34 (9)C5—C6—H6B109.2
C9—N8—C6120.77 (9)N8—C6—H6C109.2
C7—N8—C6117.73 (9)C5—C6—H6C109.2
C14—C15—C16121.06 (10)H6B—C6—H6C107.9
C14—C15—H15A119.5N8—C7—C8111.88 (9)
C16—C15—H15A119.5N8—C7—H7A109.2
N6—C11—N4127.98 (10)C8—C7—H7A109.2
N6—C11—N3118.56 (9)N8—C7—H7B109.2
N4—C11—N3113.46 (9)C8—C7—H7B109.2
C17—C16—C15118.28 (9)H7A—C7—H7B107.9
C17—C16—C12122.27 (9)C3—C4—H4B109.5
C15—C16—C12119.44 (9)C3—C4—H4C109.5
C18—C17—C16121.36 (10)H4B—C4—H4C109.5
C18—C17—H17A119.3C3—C4—H4D109.5
C16—C17—H17A119.3H4B—C4—H4D109.5
N5—C10—N4126.06 (9)H4C—C4—H4D109.5
N5—C10—N7116.60 (9)C6—C5—H5B109.5
N4—C10—N7117.34 (9)C6—C5—H5C109.5
C19—C18—C17118.25 (10)H5B—C5—H5C109.5
C19—C18—H18A120.9C6—C5—H5D109.5
C17—C18—H18A120.9H5B—C5—H5D109.5
N2—C12—C16114.46 (9)H5C—C5—H5D109.5
N2—C12—C13123.85 (9)C7—C8—H8A109.5
C16—C12—C13121.66 (9)C7—C8—H8B109.5
C15—C14—C19118.74 (10)H8A—C8—H8B109.5
C15—C14—H14A120.6C7—C8—H8C109.5
C19—C14—H14A120.6H8A—C8—H8C109.5
N5—C9—N6126.22 (9)H8B—C8—H8C109.5
N5—C9—N8117.19 (9)C2—C1—H1A109.5
N6—C9—N8116.59 (9)C2—C1—H1B109.5
N7—C2—C1113.49 (9)H1A—C1—H1B109.5
N7—C2—H2B108.9C2—C1—H1C109.5
C1—C2—H2B108.9H1A—C1—H1C109.5
N7—C2—H2C108.9H1B—C1—H1C109.5
D—H···AD—HH···AD···AD—H···A
N3—H3A···O1i0.868 (15)2.491 (15)3.2751 (15)150.7 (13)
N3—H3A···O2i0.868 (15)2.474 (15)3.2486 (15)149.0 (13)
C2—H2C···N40.972.382.7252 (15)100
C7—H7A···N50.972.392.7322 (16)100
C15—H15A···N20.932.392.7128 (15)100
C1—H1A···Cg2ii0.962.913.7486 (16)147
C7—H7B···Cg1iii0.972.713.3835 (15)127
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯O1i0.868 (15)2.491 (15)3.2751 (15)150.7 (13)
N3—H3A⋯O2i0.868 (15)2.474 (15)3.2486 (15)149.0 (13)
C2—H2C⋯N40.972.382.7252 (15)100
C7—H7A⋯N50.972.392.7322 (16)100
C15—H15A⋯N20.932.392.7128 (15)100
C1—H1ACg2ii0.962.913.7486 (16)147
C7—H7BCg1iii0.972.713.3835 (15)127

Symmetry codes: (i) ; (ii) ; (iii) . Cg1 and Cg2 are centroids of the N4–N6/ C9–C11 and C14–C19 rings, respectively.

  2 in total

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Patrick Deschamps; Prasad P Kulkarni; Bibudhendra Sarkar
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  2 in total

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