Literature DB >> 21583502

2-Benzyl-1,3-diphenyl-2,3-dihydro-1H-naphtho[1,2-e][1,3]oxazine.

Yuan Zhang1, Yong Hua Li.   

Abstract

In the title compound, C(31)H(25)NO, the oxazine ring adopts a half-chair conformation. The dihedral angles between the phenyl rings and the naphthyl ring system are 70.89 (8), 37.34 (10) and 9.42 (10)°. The crystal structure is stabilized by an aromatic π-π stacking inter-action, with a centroid-centroid distance of 3.879 (3) Å.

Entities:  

Year:  2009        PMID: 21583502      PMCID: PMC2977269          DOI: 10.1107/S1600536809025811

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and crystal structures of oxazines, see: Alfonsov et al. (2007 ▶); Li et al. (2008 ▶). For pharmaceutical applications of oxazines, see: Peglion et al. (1997 ▶); Xu et al. (2004 ▶).

Experimental

Crystal data

C31H25NO M = 427.52 Monoclinic, a = 9.0605 (18) Å b = 23.475 (5) Å c = 10.634 (2) Å β = 97.53 (3)° V = 2242.2 (8) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.984, T max = 0.985 18548 measured reflections 4392 independent reflections 2913 reflections with I > 2σ(I) R int = 0.078

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.118 S = 1.00 4392 reflections 299 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.20 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL/PC. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809025811/rz2345sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809025811/rz2345Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C31H25NOF(000) = 904
Mr = 427.52Dx = 1.266 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4392 reflections
a = 9.0605 (18) Åθ = 2.0–26.0°
b = 23.475 (5) ŵ = 0.08 mm1
c = 10.634 (2) ÅT = 293 K
β = 97.53 (3)°Block, colourless
V = 2242.2 (8) Å30.20 × 0.20 × 0.20 mm
Z = 4
Rigaku SCXmini diffractometer4392 independent reflections
Radiation source: fine-focus sealed tube2913 reflections with I > 2σ(I)
graphiteRint = 0.078
CCD_Profile_fitting scansθmax = 26.0°, θmin = 3.2°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −11→11
Tmin = 0.984, Tmax = 0.985k = −28→28
18548 measured reflectionsl = −13→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.058H-atom parameters constrained
wR(F2) = 0.118w = 1/[σ2(Fo2) + (0.0185P)2 + 1.004P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
4392 reflectionsΔρmax = 0.16 e Å3
299 parametersΔρmin = −0.20 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0082 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.56752 (15)0.05364 (6)0.18725 (13)0.0433 (4)
C250.6744 (2)0.09254 (9)0.25499 (19)0.0357 (5)
H25A0.69400.12270.19570.043*
C260.8189 (2)0.06072 (9)0.29206 (19)0.0368 (5)
N10.61811 (18)0.11912 (7)0.36044 (15)0.0339 (4)
C10.3834 (2)0.12590 (8)0.21580 (19)0.0355 (5)
C90.2345 (2)0.14567 (9)0.18089 (19)0.0381 (5)
C110.4930 (2)0.15723 (8)0.31138 (19)0.0354 (5)
H11A0.44050.16720.38320.043*
C20.4255 (2)0.07585 (9)0.16309 (19)0.0381 (5)
C30.3247 (2)0.04280 (10)0.0810 (2)0.0446 (6)
H3A0.35530.00860.04890.054*
C120.5533 (2)0.21233 (8)0.2623 (2)0.0365 (5)
C80.1826 (2)0.19750 (9)0.2272 (2)0.0479 (6)
H8A0.24590.21900.28460.058*
C100.1337 (2)0.11330 (10)0.0960 (2)0.0415 (5)
C200.7137 (2)0.13377 (9)0.6347 (2)0.0444 (6)
H20A0.78140.14530.58110.053*
C190.5928 (2)0.10047 (8)0.58716 (18)0.0342 (5)
C5−0.0124 (2)0.13407 (11)0.0593 (2)0.0521 (6)
H5A−0.07900.11290.00390.062*
C310.8413 (2)0.00538 (9)0.2547 (2)0.0453 (6)
H31A0.7636−0.01470.20890.054*
C40.1826 (2)0.06123 (10)0.0491 (2)0.0463 (6)
H4A0.11630.0392−0.00460.056*
C281.0728 (3)0.06368 (11)0.3912 (2)0.0540 (6)
H28A1.15060.08340.43780.065*
C270.9361 (2)0.08953 (10)0.3615 (2)0.0444 (6)
H27A0.92230.12660.38830.053*
C180.5762 (2)0.07786 (8)0.45383 (19)0.0383 (5)
H18A0.63750.04410.45180.046*
H18B0.47340.06660.42940.046*
C220.6355 (3)0.13384 (11)0.8404 (2)0.0562 (7)
H22A0.64950.14520.92490.067*
C170.5268 (2)0.22873 (10)0.1367 (2)0.0468 (6)
H17A0.46950.20550.07850.056*
C70.0414 (3)0.21641 (10)0.1892 (2)0.0556 (7)
H7A0.00990.25080.22020.067*
C291.0949 (3)0.00892 (11)0.3522 (2)0.0567 (7)
H29A1.1876−0.00830.37120.068*
C240.4939 (2)0.08446 (9)0.6690 (2)0.0451 (6)
H24A0.41150.06240.63900.054*
C230.5154 (3)0.10079 (11)0.7951 (2)0.0559 (7)
H23A0.44830.08930.84930.067*
C300.9789 (3)−0.02034 (11)0.2850 (2)0.0554 (6)
H30A0.9930−0.05770.25980.067*
C6−0.0562 (3)0.18458 (11)0.1040 (2)0.0579 (7)
H6A−0.15170.19810.07780.069*
C130.6384 (3)0.24804 (10)0.3467 (2)0.0526 (6)
H13A0.65720.23790.43190.063*
C210.7349 (3)0.15011 (10)0.7604 (2)0.0516 (6)
H21A0.81690.17220.79100.062*
C160.5843 (3)0.27926 (11)0.0957 (3)0.0605 (7)
H16A0.56580.28970.01080.073*
C140.6956 (3)0.29827 (11)0.3065 (3)0.0687 (8)
H14A0.75260.32170.36440.082*
C150.6686 (3)0.31363 (11)0.1813 (3)0.0690 (8)
H15A0.70750.34750.15420.083*
U11U22U33U12U13U23
O10.0346 (8)0.0491 (9)0.0444 (9)0.0029 (7)−0.0015 (7)−0.0122 (7)
C250.0343 (12)0.0402 (12)0.0318 (12)−0.0006 (9)0.0013 (10)0.0008 (9)
C260.0339 (12)0.0455 (13)0.0312 (12)0.0038 (9)0.0049 (9)0.0031 (10)
N10.0352 (10)0.0362 (10)0.0301 (10)0.0026 (7)0.0036 (8)0.0017 (7)
C10.0319 (12)0.0409 (12)0.0338 (12)−0.0016 (9)0.0043 (9)−0.0002 (9)
C90.0306 (12)0.0461 (13)0.0376 (12)−0.0002 (9)0.0049 (10)0.0052 (10)
C110.0329 (12)0.0384 (12)0.0349 (12)0.0037 (9)0.0042 (10)−0.0016 (9)
C20.0316 (12)0.0482 (13)0.0336 (12)0.0016 (10)0.0010 (10)−0.0002 (10)
C30.0443 (14)0.0490 (14)0.0397 (13)−0.0019 (10)0.0024 (11)−0.0081 (10)
C120.0321 (12)0.0360 (11)0.0416 (13)0.0047 (9)0.0055 (10)−0.0007 (10)
C80.0348 (13)0.0492 (14)0.0592 (16)0.0011 (10)0.0040 (11)0.0008 (12)
C100.0321 (12)0.0559 (14)0.0362 (13)−0.0023 (10)0.0033 (10)0.0064 (10)
C200.0430 (14)0.0494 (14)0.0402 (13)−0.0030 (10)0.0026 (11)0.0015 (11)
C190.0358 (12)0.0346 (11)0.0318 (12)0.0047 (9)0.0028 (10)0.0020 (9)
C50.0346 (13)0.0691 (17)0.0504 (15)−0.0039 (12)−0.0023 (11)0.0095 (13)
C310.0417 (13)0.0490 (14)0.0453 (14)0.0050 (10)0.0063 (11)−0.0025 (11)
C40.0402 (14)0.0597 (15)0.0374 (13)−0.0096 (11)−0.0015 (11)−0.0062 (11)
C280.0372 (14)0.0750 (18)0.0477 (15)0.0006 (12)−0.0022 (11)0.0039 (13)
C270.0371 (13)0.0496 (14)0.0456 (14)0.0006 (10)0.0016 (11)−0.0013 (11)
C180.0405 (12)0.0369 (12)0.0365 (12)−0.0019 (9)0.0015 (10)0.0018 (9)
C220.0662 (18)0.0647 (17)0.0356 (14)0.0103 (13)−0.0016 (13)−0.0081 (12)
C170.0411 (14)0.0502 (14)0.0482 (15)0.0033 (11)0.0026 (11)0.0053 (11)
C70.0411 (14)0.0532 (15)0.0726 (18)0.0067 (11)0.0084 (13)0.0016 (13)
C290.0434 (15)0.0744 (18)0.0518 (16)0.0189 (13)0.0039 (13)0.0139 (14)
C240.0407 (13)0.0502 (14)0.0449 (14)−0.0008 (10)0.0073 (11)0.0007 (11)
C230.0603 (17)0.0700 (17)0.0393 (15)0.0053 (13)0.0133 (13)0.0032 (12)
C300.0577 (16)0.0529 (15)0.0556 (16)0.0176 (12)0.0071 (13)0.0022 (12)
C60.0342 (13)0.0682 (17)0.0700 (18)0.0065 (12)0.0023 (13)0.0140 (14)
C130.0593 (16)0.0478 (14)0.0493 (15)−0.0060 (12)0.0017 (12)−0.0028 (11)
C210.0534 (15)0.0517 (15)0.0460 (15)−0.0009 (11)−0.0074 (12)−0.0062 (12)
C160.0573 (17)0.0621 (17)0.0625 (18)0.0062 (13)0.0096 (14)0.0234 (14)
C140.074 (2)0.0496 (16)0.081 (2)−0.0176 (14)0.0049 (16)−0.0066 (15)
C150.0667 (19)0.0464 (16)0.095 (2)−0.0081 (13)0.0134 (17)0.0165 (15)
O1—C21.381 (2)C31—C301.385 (3)
O1—C251.452 (2)C31—H31A0.9300
C25—N11.434 (2)C4—H4A0.9300
C25—C261.514 (3)C28—C291.373 (3)
C25—H25A0.9800C28—C271.379 (3)
C26—C311.381 (3)C28—H28A0.9300
C26—C271.387 (3)C27—H27A0.9300
N1—C181.472 (2)C18—H18A0.9700
N1—C111.484 (2)C18—H18B0.9700
C1—C21.377 (3)C22—C231.371 (3)
C1—C91.429 (3)C22—C211.372 (3)
C1—C111.515 (3)C22—H22A0.9300
C9—C81.416 (3)C17—C161.388 (3)
C9—C101.418 (3)C17—H17A0.9300
C11—C121.523 (3)C7—C61.396 (3)
C11—H11A0.9800C7—H7A0.9300
C2—C31.411 (3)C29—C301.375 (3)
C3—C41.358 (3)C29—H29A0.9300
C3—H3A0.9300C24—C231.383 (3)
C12—C171.381 (3)C24—H24A0.9300
C12—C131.386 (3)C23—H23A0.9300
C8—C71.364 (3)C30—H30A0.9300
C8—H8A0.9300C6—H6A0.9300
C10—C41.413 (3)C13—C141.378 (3)
C10—C51.417 (3)C13—H13A0.9300
C20—C211.379 (3)C21—H21A0.9300
C20—C191.386 (3)C16—C151.371 (4)
C20—H20A0.9300C16—H16A0.9300
C19—C241.381 (3)C14—C151.370 (4)
C19—C181.503 (3)C14—H14A0.9300
C5—C61.356 (3)C15—H15A0.9300
C5—H5A0.9300
C2—O1—C25113.55 (15)C3—C4—H4A119.4
N1—C25—O1112.28 (16)C10—C4—H4A119.4
N1—C25—C26113.27 (16)C29—C28—C27120.3 (2)
O1—C25—C26108.46 (16)C29—C28—H28A119.8
N1—C25—H25A107.5C27—C28—H28A119.8
O1—C25—H25A107.5C28—C27—C26120.6 (2)
C26—C25—H25A107.5C28—C27—H27A119.7
C31—C26—C27118.7 (2)C26—C27—H27A119.7
C31—C26—C25122.93 (19)N1—C18—C19113.65 (16)
C27—C26—C25118.26 (19)N1—C18—H18A108.8
C25—N1—C18113.00 (16)C19—C18—H18A108.8
C25—N1—C11108.72 (15)N1—C18—H18B108.8
C18—N1—C11112.38 (15)C19—C18—H18B108.8
C2—C1—C9118.28 (19)H18A—C18—H18B107.7
C2—C1—C11119.68 (18)C23—C22—C21119.7 (2)
C9—C1—C11122.01 (18)C23—C22—H22A120.2
C8—C9—C10117.80 (19)C21—C22—H22A120.2
C8—C9—C1122.3 (2)C12—C17—C16121.1 (2)
C10—C9—C1119.92 (19)C12—C17—H17A119.5
N1—C11—C1110.28 (16)C16—C17—H17A119.5
N1—C11—C12109.90 (16)C8—C7—C6120.5 (2)
C1—C11—C12114.56 (17)C8—C7—H7A119.7
N1—C11—H11A107.3C6—C7—H7A119.7
C1—C11—H11A107.3C28—C29—C30119.5 (2)
C12—C11—H11A107.3C28—C29—H29A120.2
O1—C2—C1123.19 (18)C30—C29—H29A120.2
O1—C2—C3114.81 (18)C19—C24—C23121.0 (2)
C1—C2—C3122.00 (19)C19—C24—H24A119.5
C4—C3—C2119.7 (2)C23—C24—H24A119.5
C4—C3—H3A120.2C22—C23—C24120.1 (2)
C2—C3—H3A120.2C22—C23—H23A120.0
C17—C12—C13118.0 (2)C24—C23—H23A120.0
C17—C12—C11122.93 (19)C29—C30—C31120.4 (2)
C13—C12—C11119.07 (19)C29—C30—H30A119.8
C7—C8—C9121.2 (2)C31—C30—H30A119.8
C7—C8—H8A119.4C5—C6—C7120.4 (2)
C9—C8—H8A119.4C5—C6—H6A119.8
C4—C10—C5121.7 (2)C7—C6—H6A119.8
C4—C10—C9118.9 (2)C14—C13—C12121.1 (2)
C5—C10—C9119.4 (2)C14—C13—H13A119.5
C21—C20—C19120.9 (2)C12—C13—H13A119.5
C21—C20—H20A119.6C22—C21—C20120.3 (2)
C19—C20—H20A119.6C22—C21—H21A119.9
C24—C19—C20118.1 (2)C20—C21—H21A119.9
C24—C19—C18120.37 (19)C15—C16—C17119.6 (2)
C20—C19—C18121.34 (19)C15—C16—H16A120.2
C6—C5—C10120.7 (2)C17—C16—H16A120.2
C6—C5—H5A119.7C15—C14—C13120.0 (3)
C10—C5—H5A119.7C15—C14—H14A120.0
C26—C31—C30120.3 (2)C13—C14—H14A120.0
C26—C31—H31A119.8C14—C15—C16120.2 (2)
C30—C31—H31A119.8C14—C15—H15A119.9
C3—C4—C10121.2 (2)C16—C15—H15A119.9
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-Butyl-1,3-diphenyl-2,3-dihydro-1H-naphtho[1,2-e][1,3]oxazine.

Authors:  Yong Hua Li; Min Min Zhao; Yuan Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-20
  2 in total
  1 in total

1.  8-Bromo-1,3-diphenyl-2,3-dihydro-1H-naphtho-[1,2-e][1,3]oxazine.

Authors:  Jerry P Jasinski; Albert E Pek; A N Mayekar; H S Yathirajan; B Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-17
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.