Literature DB >> 21583489

2-(2,4-Dichloro-phen-yl)-9-phenyl-2,3-di-hydro-thieno[3,2-b]quinoline.

K Balamurugan, D Narmadha, J Suresh, S Perumal, P L Nilantha Lakshman.   

Abstract

In the title compound, C(23)H(15)Cl(2)NS, the quinoline system is almost planar [r.m.s. deviation = 0.013 (2) Å]. The phenyl group is disordered over two positions with site occupancies of 0.55 and 0.45, and is oriented in a nearly perpendicular configuration to the quinoline ring [the dihedral angles between the quinoline ring and the major and minor disordered components of the phenyl ring are 81.8 (2) and 71.6 (2)°, respectively]. The dihydro-thiene ring adopts an envelope conformation. The dihedral angle between the chloro-phenyl ring and the quinoline system is 79.32 (1)°. In the crystal weak C-H⋯π inter-actions occur.

Entities:  

Year:  2009        PMID: 21583489      PMCID: PMC2977236          DOI: 10.1107/S1600536809025380

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of quinoline derivatives, see: Kalluraya & Sreenivasa (1998 ▶); Maguire et al. (1994 ▶); Doube et al. (1998 ▶). For ring puckering analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C23H15Cl2NS M = 408.32 Monoclinic, a = 11.8860 (5) Å b = 11.5040 (5) Å c = 14.0270 (6) Å β = 94.297 (9)° V = 1912.61 (14) Å3 Z = 4 Mo Kα radiation μ = 0.46 mm−1 T = 293 K 0.19 × 0.16 × 0.11 mm

Data collection

Nonius MACH-3 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.917, T max = 0.951 3917 measured reflections 3363 independent reflections 2577 reflections with I > 2σ(I) R int = 0.014 2 standard reflections frequency: 60 min intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.091 S = 1.02 3363 reflections 284 parameters 18 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1996 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809025380/at2782sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809025380/at2782Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C23H15Cl2NSF(000) = 840
Mr = 408.32Dx = 1.418 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71069 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 11.8860 (5) Åθ = 2–25°
b = 11.5040 (5) ŵ = 0.46 mm1
c = 14.0270 (6) ÅT = 293 K
β = 94.297 (9)°Block, colourless
V = 1912.61 (14) Å30.19 × 0.16 × 0.11 mm
Z = 4
Nonius MACH-3 diffractometer2577 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.014
graphiteθmax = 25.0°, θmin = 2.3°
ω–2θ scansh = 0→14
Absorption correction: ψ scan (North et al., 1968)k = −1→13
Tmin = 0.917, Tmax = 0.951l = −16→16
3917 measured reflections2 standard reflections every 60 min
3363 independent reflections intensity decay: none
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.091w = 1/[σ2(Fo2) + (0.0458P)2 + 0.5943P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
3363 reflectionsΔρmax = 0.20 e Å3
284 parametersΔρmin = −0.22 e Å3
18 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0047 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C20.11979 (16)0.26004 (19)0.25210 (14)0.0464 (5)
C30.14508 (15)0.30797 (18)0.34454 (13)0.0428 (4)
C40.21084 (15)0.41146 (17)0.35382 (12)0.0405 (4)
C50.24702 (14)0.45739 (17)0.27087 (12)0.0395 (4)
C60.21560 (15)0.40461 (18)0.18138 (12)0.0428 (4)
C70.05703 (19)0.1566 (2)0.24282 (17)0.0629 (6)
H70.04070.12470.18250.075*
C80.01978 (19)0.1025 (2)0.3209 (2)0.0701 (7)
H8−0.02190.03430.31340.084*
C90.04406 (18)0.1493 (2)0.41213 (18)0.0632 (6)
H90.01850.11170.46510.076*
C100.10473 (17)0.2492 (2)0.42434 (15)0.0521 (5)
H100.11990.27930.48550.063*
C170.25242 (17)0.4742 (2)0.09826 (14)0.0523 (5)
H17A0.19120.52350.07270.063*
H17B0.27350.42250.04790.063*
C180.35345 (17)0.54856 (19)0.13425 (13)0.0478 (5)
H180.35120.62130.09770.057*
C190.46829 (16)0.49449 (17)0.12880 (12)0.0446 (5)
C200.56613 (17)0.55995 (18)0.14608 (14)0.0472 (5)
C210.67332 (18)0.5143 (2)0.14224 (14)0.0528 (5)
H210.73690.56050.15490.063*
C220.68341 (19)0.3986 (2)0.11907 (14)0.0553 (5)
C230.5893 (2)0.3301 (2)0.10080 (15)0.0588 (6)
H230.59710.25230.08470.071*
C240.48327 (19)0.37731 (19)0.10646 (14)0.0524 (5)
H240.42020.33000.09510.063*
N10.15524 (13)0.31025 (16)0.17022 (11)0.0487 (4)
Cl10.55600 (5)0.70657 (5)0.17491 (5)0.0697 (2)
Cl20.81734 (6)0.33969 (7)0.11513 (6)0.0859 (3)
S10.32820 (5)0.58301 (5)0.26012 (4)0.05025 (17)
C110.23924 (16)0.46862 (18)0.44796 (13)0.0453 (5)
C140.2954 (3)0.5830 (3)0.61987 (18)0.0854 (9)
H140.312 (2)0.624 (3)0.678 (2)0.102*
C120.1794 (7)0.5609 (6)0.4804 (6)0.067 (2)0.55
H120.11760.58660.44150.080*0.55
C130.2032 (7)0.6189 (8)0.5661 (6)0.085 (3)0.55
H130.15810.67920.58540.102*0.55
C150.3566 (7)0.4863 (7)0.5933 (7)0.094 (3)0.55
H150.41630.45940.63400.112*0.55
C160.3298 (6)0.4293 (8)0.5068 (6)0.076 (3)0.55
H160.37220.36600.48900.091*0.55
C12'0.1533 (9)0.5268 (6)0.4904 (7)0.055 (2)0.45
H12'0.07940.52820.46370.066*0.45
C13'0.1868 (8)0.5831 (8)0.5765 (7)0.075 (3)0.45
H13'0.13190.62360.60680.090*0.45
C15'0.3783 (9)0.5283 (9)0.5745 (8)0.083 (3)0.45
H15'0.45270.52890.60040.099*0.45
C16'0.3486 (7)0.4717 (9)0.4887 (7)0.064 (3)0.45
H16'0.40480.43440.45740.077*0.45
U11U22U33U12U13U23
C20.0389 (10)0.0567 (12)0.0433 (10)−0.0048 (9)−0.0001 (8)0.0028 (9)
C30.0359 (9)0.0532 (12)0.0393 (10)0.0020 (9)0.0028 (7)0.0059 (9)
C40.0377 (9)0.0506 (11)0.0334 (9)0.0059 (9)0.0035 (7)0.0029 (8)
C50.0373 (9)0.0471 (10)0.0340 (9)0.0011 (8)0.0030 (7)0.0011 (8)
C60.0387 (9)0.0563 (12)0.0332 (9)−0.0003 (9)0.0017 (7)0.0014 (9)
C70.0544 (13)0.0730 (16)0.0599 (13)−0.0185 (12)−0.0042 (10)−0.0018 (12)
C80.0527 (13)0.0715 (16)0.0858 (18)−0.0230 (12)0.0033 (12)0.0093 (14)
C90.0502 (12)0.0736 (16)0.0670 (15)−0.0064 (12)0.0114 (11)0.0221 (12)
C100.0467 (11)0.0646 (13)0.0459 (11)0.0017 (10)0.0092 (9)0.0101 (10)
C170.0532 (11)0.0699 (14)0.0339 (9)−0.0036 (11)0.0038 (8)0.0064 (10)
C180.0537 (11)0.0552 (12)0.0353 (9)−0.0033 (10)0.0087 (8)0.0079 (9)
C190.0540 (11)0.0492 (11)0.0314 (9)−0.0030 (9)0.0089 (8)0.0074 (8)
C200.0554 (12)0.0465 (11)0.0410 (10)−0.0023 (9)0.0124 (9)0.0054 (8)
C210.0524 (12)0.0611 (14)0.0461 (11)−0.0019 (10)0.0118 (9)0.0094 (10)
C220.0631 (13)0.0604 (14)0.0443 (11)0.0125 (11)0.0168 (10)0.0137 (10)
C230.0842 (17)0.0479 (12)0.0456 (11)0.0063 (12)0.0138 (11)0.0070 (10)
C240.0649 (13)0.0514 (12)0.0416 (10)−0.0075 (10)0.0077 (9)0.0049 (9)
N10.0466 (9)0.0625 (11)0.0364 (8)−0.0067 (8)−0.0004 (7)−0.0022 (8)
Cl10.0660 (4)0.0495 (3)0.0953 (5)−0.0083 (3)0.0177 (3)−0.0065 (3)
Cl20.0773 (4)0.0853 (5)0.0990 (5)0.0299 (4)0.0315 (4)0.0238 (4)
S10.0578 (3)0.0512 (3)0.0430 (3)−0.0080 (2)0.0117 (2)−0.0035 (2)
C110.0528 (11)0.0530 (12)0.0303 (9)−0.0003 (10)0.0046 (8)0.0038 (9)
C140.132 (3)0.085 (2)0.0384 (13)−0.019 (2)0.0008 (16)−0.0091 (14)
C120.086 (5)0.047 (4)0.064 (4)0.013 (3)−0.018 (3)−0.007 (3)
C130.148 (7)0.041 (5)0.062 (5)0.015 (4)−0.022 (4)−0.009 (3)
C150.076 (5)0.158 (9)0.043 (4)0.005 (5)−0.016 (3)−0.007 (5)
C160.070 (4)0.112 (7)0.044 (3)0.031 (4)−0.003 (3)−0.009 (4)
C12'0.077 (5)0.048 (5)0.042 (3)0.002 (4)0.012 (3)0.000 (3)
C13'0.144 (8)0.033 (5)0.050 (4)0.024 (4)0.028 (5)0.001 (3)
C15'0.083 (5)0.113 (7)0.051 (6)−0.027 (5)−0.005 (4)−0.012 (5)
C16'0.060 (4)0.088 (7)0.044 (5)−0.007 (4)−0.001 (3)−0.010 (4)
C2—N11.379 (2)C21—C221.378 (3)
C2—C71.405 (3)C21—H210.9300
C2—C31.420 (3)C22—C231.376 (3)
C3—C101.421 (3)C22—Cl21.735 (2)
C3—C41.425 (3)C23—C241.380 (3)
C4—C51.376 (2)C23—H230.9300
C4—C111.491 (3)C24—H240.9300
C5—C61.419 (3)C11—C121.374 (7)
C5—S11.7505 (19)C11—C16'1.381 (8)
C6—N11.304 (2)C11—C161.383 (7)
C6—C171.506 (3)C11—C12'1.391 (8)
C7—C81.362 (3)C14—C131.348 (7)
C7—H70.9300C14—C15'1.366 (8)
C8—C91.399 (4)C14—C13'1.385 (8)
C8—H80.9300C14—C151.395 (7)
C9—C101.361 (3)C14—H140.95 (3)
C9—H90.9300C12—C131.385 (7)
C10—H100.9300C12—H120.9300
C17—C181.529 (3)C13—H130.9300
C17—H17A0.9700C15—C161.395 (7)
C17—H17B0.9700C15—H150.9300
C18—C191.507 (3)C16—H160.9300
C18—S11.8557 (19)C12'—C13'1.401 (8)
C18—H180.9800C12'—H12'0.9300
C19—C201.391 (3)C13'—H13'0.9300
C19—C241.398 (3)C15'—C16'1.391 (8)
C20—C211.383 (3)C15'—H15'0.9300
C20—Cl11.741 (2)C16'—H16'0.9300
N1—C2—C7118.08 (18)C22—C23—H23120.1
N1—C2—C3122.72 (18)C24—C23—H23120.1
C7—C2—C3119.20 (18)C23—C24—C19121.6 (2)
C2—C3—C10118.26 (19)C23—C24—H24119.2
C2—C3—C4119.01 (16)C19—C24—H24119.2
C10—C3—C4122.72 (18)C6—N1—C2116.63 (16)
C5—C4—C3116.60 (16)C5—S1—C1892.02 (9)
C5—C4—C11121.01 (18)C12—C11—C16'109.8 (7)
C3—C4—C11122.39 (16)C12—C11—C16117.0 (6)
C4—C5—C6120.37 (18)C16'—C11—C1625.1 (5)
C4—C5—S1126.81 (15)C12—C11—C12'21.9 (5)
C6—C5—S1112.78 (13)C16'—C11—C12'120.6 (7)
N1—C6—C5124.62 (17)C16—C11—C12'117.7 (6)
N1—C6—C17122.59 (17)C12—C11—C4123.0 (4)
C5—C6—C17112.65 (17)C16'—C11—C4121.4 (5)
C8—C7—C2121.0 (2)C16—C11—C4119.9 (4)
C8—C7—H7119.5C12'—C11—C4117.8 (5)
C2—C7—H7119.5C13—C14—C15'117.7 (7)
C7—C8—C9120.2 (2)C13—C14—C13'20.3 (6)
C7—C8—H8119.9C15'—C14—C13'118.5 (7)
C9—C8—H8119.9C13—C14—C15120.9 (6)
C10—C9—C8120.7 (2)C15'—C14—C1525.8 (6)
C10—C9—H9119.6C13'—C14—C15111.8 (6)
C8—C9—H9119.6C13—C14—H14116.3 (19)
C9—C10—C3120.6 (2)C15'—C14—H14120.9 (19)
C9—C10—H10119.7C13'—C14—H14120.5 (19)
C3—C10—H10119.7C15—C14—H14122.7 (19)
C6—C17—C18107.96 (16)C11—C12—C13125.6 (8)
C6—C17—H17A110.1C11—C12—H12117.2
C18—C17—H17A110.1C13—C12—H12117.2
C6—C17—H17B110.1C14—C13—C12116.3 (8)
C18—C17—H17B110.1C14—C13—H13121.9
H17A—C17—H17B108.4C12—C13—H13121.9
C19—C18—C17116.36 (18)C14—C15—C16121.2 (8)
C19—C18—S1110.37 (13)C14—C15—H15119.4
C17—C18—S1104.75 (12)C16—C15—H15119.4
C19—C18—H18108.4C11—C16—C15118.8 (8)
C17—C18—H18108.4C11—C16—H16120.6
S1—C18—H18108.4C15—C16—H16120.6
C20—C19—C24116.24 (19)C11—C12'—C13'114.9 (9)
C20—C19—C18121.07 (18)C11—C12'—H12'122.5
C24—C19—C18122.69 (18)C13'—C12'—H12'122.5
C21—C20—C19123.2 (2)C14—C13'—C12'124.9 (9)
C21—C20—Cl1117.18 (16)C14—C13'—H13'117.5
C19—C20—Cl1119.57 (16)C12'—C13'—H13'117.5
C22—C21—C20118.2 (2)C14—C15'—C16'118.3 (11)
C22—C21—H21120.9C14—C15'—H15'120.9
C20—C21—H21120.9C16'—C15'—H15'120.9
C23—C22—C21120.9 (2)C11—C16'—C15'122.7 (11)
C23—C22—Cl2120.38 (18)C11—C16'—H16'118.7
C21—C22—Cl2118.75 (19)C15'—C16'—H16'118.7
C22—C23—C24119.8 (2)
N1—C2—C3—C10−179.85 (18)C7—C2—N1—C6−178.41 (19)
C7—C2—C3—C10−0.5 (3)C3—C2—N1—C61.0 (3)
N1—C2—C3—C4−0.7 (3)C4—C5—S1—C18168.69 (17)
C7—C2—C3—C4178.65 (19)C6—C5—S1—C18−13.48 (15)
C2—C3—C4—C5−0.9 (3)C19—C18—S1—C5−99.75 (15)
C10—C3—C4—C5178.20 (17)C17—C18—S1—C526.24 (15)
C2—C3—C4—C11178.78 (17)C5—C4—C11—C1282.4 (4)
C10—C3—C4—C11−2.1 (3)C3—C4—C11—C12−97.3 (4)
C3—C4—C5—C62.2 (3)C5—C4—C11—C16'−68.1 (5)
C11—C4—C5—C6−177.50 (17)C3—C4—C11—C16'112.3 (5)
C3—C4—C5—S1179.84 (14)C5—C4—C11—C16−97.3 (5)
C11—C4—C5—S10.2 (3)C3—C4—C11—C1683.0 (5)
C4—C5—C6—N1−2.1 (3)C5—C4—C11—C12'107.1 (4)
S1—C5—C6—N1179.96 (16)C3—C4—C11—C12'−72.5 (4)
C4—C5—C6—C17173.78 (17)C16'—C11—C12—C13−25.1 (9)
S1—C5—C6—C17−4.2 (2)C16—C11—C12—C131.1 (9)
N1—C2—C7—C8179.8 (2)C12'—C11—C12—C1399 (2)
C3—C2—C7—C80.4 (3)C4—C11—C12—C13−178.6 (6)
C2—C7—C8—C9−0.2 (4)C15'—C14—C13—C1224.1 (10)
C7—C8—C9—C100.1 (4)C13'—C14—C13—C12−74 (2)
C8—C9—C10—C3−0.2 (3)C15—C14—C13—C12−5.3 (10)
C2—C3—C10—C90.4 (3)C11—C12—C13—C142.3 (11)
C4—C3—C10—C9−178.69 (19)C13—C14—C15—C165.1 (12)
N1—C6—C17—C18−159.49 (18)C15'—C14—C15—C16−85 (2)
C5—C6—C17—C1824.6 (2)C13'—C14—C15—C1625.4 (11)
C6—C17—C18—C1990.0 (2)C12—C11—C16—C15−1.5 (10)
C6—C17—C18—S1−32.2 (2)C16'—C11—C16—C1577 (2)
C17—C18—C19—C20170.37 (17)C12'—C11—C16—C15−26.2 (10)
S1—C18—C19—C20−70.5 (2)C4—C11—C16—C15178.2 (6)
C17—C18—C19—C24−9.6 (3)C14—C15—C16—C11−1.4 (12)
S1—C18—C19—C24109.51 (18)C12—C11—C12'—C13'−67 (2)
C24—C19—C20—C21−0.2 (3)C16'—C11—C12'—C13'−1.9 (9)
C18—C19—C20—C21179.80 (17)C16—C11—C12'—C13'26.7 (8)
C24—C19—C20—Cl1−179.75 (14)C4—C11—C12'—C13'−177.2 (5)
C18—C19—C20—Cl10.2 (2)C13—C14—C13'—C12'96 (3)
C19—C20—C21—C220.8 (3)C15'—C14—C13'—C12'2.8 (12)
Cl1—C20—C21—C22−179.67 (15)C15—C14—C13'—C12'−24.8 (10)
C20—C21—C22—C23−0.4 (3)C11—C12'—C13'—C14−0.6 (11)
C20—C21—C22—Cl2−179.36 (15)C13—C14—C15'—C16'−25.4 (12)
C21—C22—C23—C24−0.6 (3)C13'—C14—C15'—C16'−2.3 (12)
Cl2—C22—C23—C24178.41 (15)C15—C14—C15'—C16'78.8 (19)
C22—C23—C24—C191.2 (3)C12—C11—C16'—C15'23.5 (10)
C20—C19—C24—C23−0.8 (3)C16—C11—C16'—C15'−88 (2)
C18—C19—C24—C23179.23 (18)C12'—C11—C16'—C15'2.3 (11)
C5—C6—N1—C20.4 (3)C4—C11—C16'—C15'177.4 (7)
C17—C6—N1—C2−175.03 (18)C14—C15'—C16'—C11−0.1 (14)
D—H···AD—HH···AD···AD—H···A
C8—H8···Cg2i0.932.923.818 (2)162
C21—H21···Cg3ii0.932.713.636 (2)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C8—H8⋯Cg2i0.932.923.818 (2)162
C21—H21⋯Cg3ii0.932.713.636 (2)172

Symmetry codes: (i) ; (ii) . Cg2 and Cg3 are the centroids of the N1/C2–C6 and C2/C3/C7–C10 rings, respectively.

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A new series of PDGF receptor tyrosine kinase inhibitors: 3-substituted quinoline derivatives.

Authors:  M P Maguire; K R Sheets; K McVety; A P Spada; A Zilberstein
Journal:  J Med Chem       Date:  1994-07-08       Impact factor: 7.446

3.  Quinolines as potent 5-lipoxygenase inhibitors: synthesis and biological profile of L-746,530.

Authors:  D Dubé; M Blouin; C Brideau; C C Chan; S Desmarais; D Ethier; J P Falgueyret; R W Friesen; M Girard; Y Girard; J Guay; D Riendeau; P Tagari; R N Young
Journal:  Bioorg Med Chem Lett       Date:  1998-05-19       Impact factor: 2.823

4.  Synthesis and pharmacological properties of some quinoline derivatives.

Authors:  B Kalluraya; S Sreenivasa
Journal:  Farmaco       Date:  1998-06-30

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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