Literature DB >> 21583472

2-(2,6-Dichloro-benz-yl)pyrrolidine-1,3-dione.

Peng-Mian Huang, Xiao-Chun Wang.   

Abstract

In the title compound, C(11)H(9)Cl(2)NO(2), the dihedral anngle between the mean planes of the aromatic ring and the twisted pyrrolidinedione ring is 79.98 (9)°.

Entities:  

Year:  2009        PMID: 21583472      PMCID: PMC2977334          DOI: 10.1107/S1600536809024970

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Duan et al. (2005 ▶). For the pharmaceutical properties of pyrrolidine-2,5-dione derivatives, see: Obniska et al. (2009 ▶).

Experimental

Crystal data

C11H9Cl2NO2 M = 258.09 Orthorhombic, a = 4.8057 (5) Å b = 9.4388 (8) Å c = 23.936 (2) Å V = 1085.74 (18) Å3 Z = 4 Mo Kα radiation μ = 0.58 mm−1 T = 113 K 0.14 × 0.12 × 0.10 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.923, T max = 0.944 7528 measured reflections 2562 independent reflections 2400 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.073 S = 1.09 2562 reflections 146 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.27 e Å−3 Absolute structure: Flack (1983 ▶), 1017 Friedel pairs Flack parameter: 0.01 (6) Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2005 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809024970/hb5015sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809024970/hb5015Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H9Cl2NO2Dx = 1.579 Mg m3
Mr = 258.09Melting point = 409–411 K
Orthorhombic, P212121Mo Kα radiation, λ = 0.71070 Å
Hall symbol: P 2ac 2abCell parameters from 2881 reflections
a = 4.8057 (5) Åθ = 1.7–27.9°
b = 9.4388 (8) ŵ = 0.58 mm1
c = 23.936 (2) ÅT = 113 K
V = 1085.74 (18) Å3Block, colorless
Z = 40.14 × 0.12 × 0.10 mm
F(000) = 528
Rigaku Saturn CCD area-detector diffractometer2562 independent reflections
Radiation source: rotating anode2400 reflections with I > 2σ(I)
confocalRint = 0.029
Detector resolution: 7.31 pixels mm-1θmax = 27.9°, θmin = 1.7°
ω and φ scansh = −4→6
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −12→12
Tmin = 0.923, Tmax = 0.944l = −30→31
7528 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.031w = 1/[σ2(Fo2) + (0.0337P)2 + 0.1572P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.073(Δ/σ)max < 0.001
S = 1.09Δρmax = 0.28 e Å3
2562 reflectionsΔρmin = −0.27 e Å3
146 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.027 (3)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 1017 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.01 (6)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.00935 (11)−0.15827 (4)0.039298 (15)0.02779 (12)
Cl2−0.01306 (10)0.14810 (5)0.231345 (15)0.02661 (12)
O1−0.4371 (3)0.35252 (13)0.15425 (5)0.0256 (3)
O20.2345 (3)0.17916 (13)0.03882 (5)0.0258 (3)
N1−0.1077 (3)0.23490 (14)0.10180 (5)0.0172 (3)
C1−0.2311 (4)0.35434 (18)0.12493 (6)0.0201 (3)
C2−0.0631 (4)0.48127 (18)0.10689 (8)0.0276 (4)
H2A0.05140.51740.13820.033*
H2B−0.18630.55820.09360.033*
C30.1211 (4)0.42692 (18)0.05958 (7)0.0222 (4)
H3A0.05200.46040.02290.027*
H3B0.31560.45910.06450.027*
C40.1017 (4)0.26745 (17)0.06376 (6)0.0186 (3)
C5−0.2043 (4)0.09082 (17)0.11224 (6)0.0177 (3)
H5A−0.27350.04960.07680.021*
H5B−0.36190.09390.13890.021*
C60.0205 (4)−0.00365 (15)0.13563 (6)0.0160 (3)
C70.1336 (4)−0.11631 (17)0.10562 (7)0.0193 (3)
C80.3417 (4)−0.20312 (18)0.12690 (8)0.0255 (4)
H80.4149−0.27830.10500.031*
C90.4416 (4)−0.17880 (19)0.18054 (8)0.0283 (4)
H90.5851−0.23700.19530.034*
C100.3327 (4)−0.0703 (2)0.21228 (7)0.0253 (4)
H100.3987−0.05380.24910.030*
C110.1251 (4)0.01445 (17)0.18967 (7)0.0195 (3)
U11U22U33U12U13U23
Cl10.0382 (3)0.0230 (2)0.02216 (19)0.0038 (2)−0.0022 (2)−0.00636 (14)
Cl20.0287 (2)0.0340 (2)0.01716 (18)0.0004 (2)−0.00099 (17)−0.00597 (15)
O10.0261 (7)0.0286 (6)0.0223 (5)0.0089 (6)0.0024 (5)−0.0028 (5)
O20.0255 (7)0.0264 (7)0.0254 (6)0.0043 (5)0.0073 (5)0.0028 (5)
N10.0175 (7)0.0171 (6)0.0171 (6)0.0008 (6)0.0003 (6)−0.0001 (5)
C10.0224 (9)0.0194 (8)0.0186 (7)0.0029 (7)−0.0033 (6)−0.0012 (6)
C20.0315 (11)0.0185 (7)0.0329 (9)−0.0017 (8)−0.0009 (8)−0.0001 (7)
C30.0218 (9)0.0207 (8)0.0242 (8)−0.0039 (7)−0.0037 (7)0.0034 (7)
C40.0177 (8)0.0227 (8)0.0155 (7)0.0009 (7)−0.0020 (6)0.0018 (6)
C50.0188 (8)0.0153 (7)0.0189 (7)−0.0005 (6)−0.0016 (7)−0.0002 (6)
C60.0141 (8)0.0167 (7)0.0174 (6)−0.0022 (7)−0.0003 (6)0.0030 (5)
C70.0185 (8)0.0183 (7)0.0210 (7)−0.0012 (7)−0.0001 (7)0.0023 (6)
C80.0231 (10)0.0179 (8)0.0354 (9)0.0017 (7)0.0043 (8)0.0042 (7)
C90.0215 (10)0.0245 (9)0.0388 (10)0.0014 (8)−0.0007 (8)0.0156 (7)
C100.0221 (10)0.0303 (9)0.0235 (8)−0.0061 (8)−0.0035 (7)0.0109 (7)
C110.0172 (8)0.0223 (8)0.0190 (7)−0.0021 (7)0.0014 (7)0.0031 (6)
Cl1—C71.7417 (17)C3—H3B0.9900
Cl2—C111.7400 (17)C5—C61.509 (2)
O1—C11.213 (2)C5—H5A0.9900
O2—C41.208 (2)C5—H5B0.9900
N1—C11.389 (2)C6—C71.394 (2)
N1—C41.391 (2)C6—C111.398 (2)
N1—C51.459 (2)C7—C81.390 (2)
C1—C21.508 (2)C8—C91.390 (3)
C2—C31.526 (3)C8—H80.9500
C2—H2A0.9900C9—C101.378 (3)
C2—H2B0.9900C9—H90.9500
C3—C41.511 (2)C10—C111.389 (2)
C3—H3A0.9900C10—H100.9500
C1—N1—C4112.99 (14)C6—C5—H5A109.0
C1—N1—C5123.52 (14)N1—C5—H5B109.0
C4—N1—C5123.25 (13)C6—C5—H5B109.0
O1—C1—N1124.58 (16)H5A—C5—H5B107.8
O1—C1—C2127.86 (16)C7—C6—C11115.46 (15)
N1—C1—C2107.56 (14)C7—C6—C5122.61 (14)
C1—C2—C3104.84 (14)C11—C6—C5121.91 (14)
C1—C2—H2A110.8C8—C7—C6122.79 (16)
C3—C2—H2A110.8C8—C7—Cl1116.53 (14)
C1—C2—H2B110.8C6—C7—Cl1120.64 (13)
C3—C2—H2B110.8C7—C8—C9119.33 (17)
H2A—C2—H2B108.9C7—C8—H8120.3
C4—C3—C2104.48 (14)C9—C8—H8120.3
C4—C3—H3A110.9C10—C9—C8120.04 (16)
C2—C3—H3A110.9C10—C9—H9120.0
C4—C3—H3B110.9C8—C9—H9120.0
C2—C3—H3B110.9C9—C10—C11119.09 (16)
H3A—C3—H3B108.9C9—C10—H10120.5
O2—C4—N1123.60 (15)C11—C10—H10120.5
O2—C4—C3128.46 (16)C10—C11—C6123.25 (16)
N1—C4—C3107.93 (14)C10—C11—Cl2117.94 (13)
N1—C5—C6112.74 (14)C6—C11—Cl2118.80 (13)
N1—C5—H5A109.0
C4—N1—C1—O1171.59 (15)N1—C5—C6—C1169.50 (19)
C5—N1—C1—O1−3.0 (2)C11—C6—C7—C8−1.7 (2)
C4—N1—C1—C2−8.48 (18)C5—C6—C7—C8179.66 (15)
C5—N1—C1—C2176.92 (14)C11—C6—C7—Cl1176.23 (12)
O1—C1—C2—C3−165.92 (16)C5—C6—C7—Cl1−2.4 (2)
N1—C1—C2—C314.14 (18)C6—C7—C8—C90.7 (3)
C1—C2—C3—C4−14.26 (18)Cl1—C7—C8—C9−177.37 (14)
C1—N1—C4—O2−179.73 (16)C7—C8—C9—C100.6 (3)
C5—N1—C4—O2−5.1 (3)C8—C9—C10—C11−0.7 (3)
C1—N1—C4—C3−1.03 (18)C9—C10—C11—C6−0.5 (3)
C5—N1—C4—C3173.59 (14)C9—C10—C11—Cl2178.68 (13)
C2—C3—C4—O2−171.54 (18)C7—C6—C11—C101.7 (2)
C2—C3—C4—N19.84 (18)C5—C6—C11—C10−179.73 (16)
C1—N1—C5—C6−123.48 (16)C7—C6—C11—Cl2−177.52 (13)
C4—N1—C5—C662.46 (19)C5—C6—C11—Cl21.1 (2)
N1—C5—C6—C7−111.97 (17)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and anticonvulsant activity of new N-[(4-arylpiperazin-1-yl)-alkyl] derivatives of 3-phenyl-pyrrolidine-2,5-dione.

Authors:  Jolanta Obniska; Krzysztof Kaminski; Dorota Skrzynska; Joanna Pichor
Journal:  Eur J Med Chem       Date:  2008-07-07       Impact factor: 6.514

  2 in total

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