Literature DB >> 21583467

2-Chloro-4-fluoro-N-phenyl-benzamide.

Zhengde Tan, Yi Bing, Shen Fang, Zhao Kai, Yang Yan.   

Abstract

In the title compound, C(13)H(9)ClFNO, the dihedral angle between the two aromatic rings is 13.6 (2)°. In the crystal, the mol-ecules are linked by inter-molecular N-H⋯O hydrogen bonds into chains extending along the c-axis direction.

Entities:  

Year:  2009        PMID: 21583467      PMCID: PMC2977102          DOI: 10.1107/S1600536809024787

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the chemical and pharmacological properties of amides, see: Arrizabalaga et al. (1984 ▶); Šladowska et al. (1999 ▶).

Experimental

Crystal data

C13H9ClFNO M = 249.66 Monoclinic, a = 22.262 (3) Å b = 5.6452 (6) Å c = 9.6743 (12) Å β = 105.832 (2)° V = 1169.7 (2) Å3 Z = 4 Mo Kα radiation μ = 0.32 mm−1 T = 298 K 0.45 × 0.40 × 0.27 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.869, T max = 0.919 2887 measured reflections 1671 independent reflections 1470 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.079 S = 1.04 1671 reflections 154 parameters 2 restraints H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.12 e Å−3 Absolute structure: Flack, (1983 ▶), 637 Friedel pairs Flack parameter: 0.04 (7) Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809024787/si2182sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809024787/si2182Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H9ClFNOF(000) = 512
Mr = 249.66Dx = 1.418 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
a = 22.262 (3) ÅCell parameters from 1638 reflections
b = 5.6452 (6) Åθ = 2.9–27.0°
c = 9.6743 (12) ŵ = 0.32 mm1
β = 105.832 (2)°T = 298 K
V = 1169.7 (2) Å3Block, colorless
Z = 40.45 × 0.40 × 0.27 mm
Bruker SMART CCD diffractometer1671 independent reflections
Radiation source: fine-focus sealed tube1470 reflections with I > 2σ(I)
graphiteRint = 0.023
φ and ω scansθmax = 25.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −24→26
Tmin = 0.869, Tmax = 0.919k = −6→5
2887 measured reflectionsl = −11→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H-atom parameters constrained
wR(F2) = 0.079w = 1/[σ2(Fo2) + (0.0432P)2 + 0.1416P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
1671 reflectionsΔρmax = 0.21 e Å3
154 parametersΔρmin = −0.12 e Å3
2 restraintsAbsolute structure: Flack, (1983), 637 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.04 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.25827 (4)0.57325 (11)0.03581 (7)0.0567 (2)
F10.19086 (10)−0.1122 (4)0.2865 (2)0.0839 (7)
N10.42846 (11)0.5122 (4)0.3097 (2)0.0439 (5)
H10.42000.49440.39070.053*
O10.39721 (10)0.4168 (4)0.0742 (2)0.0619 (6)
C10.38996 (13)0.4115 (4)0.1951 (3)0.0407 (6)
C20.33604 (12)0.2803 (4)0.2241 (2)0.0362 (6)
C30.27498 (13)0.3337 (4)0.1537 (3)0.0392 (6)
C40.22559 (14)0.2060 (5)0.1747 (3)0.0479 (7)
H40.18450.24580.12810.057*
C50.23956 (15)0.0173 (6)0.2675 (3)0.0538 (8)
C60.29854 (16)−0.0470 (5)0.3395 (3)0.0513 (8)
H60.3061−0.17720.40080.062*
C70.34669 (13)0.0887 (5)0.3182 (3)0.0457 (7)
H70.38750.05100.36810.055*
C80.48249 (13)0.6470 (5)0.3095 (3)0.0428 (7)
C90.47880 (18)0.8278 (6)0.2111 (4)0.0632 (8)
H90.44150.85930.14220.076*
C100.5315 (2)0.9607 (7)0.2168 (5)0.0802 (12)
H100.52961.08100.15010.096*
C110.5862 (2)0.9185 (6)0.3187 (5)0.0805 (12)
H110.62121.01070.32200.097*
C120.58956 (18)0.7403 (7)0.4161 (5)0.0810 (10)
H120.62690.71020.48550.097*
C130.53723 (17)0.6047 (6)0.4110 (4)0.0637 (9)
H130.53950.48380.47750.076*
U11U22U33U12U13U23
Cl10.0651 (5)0.0510 (4)0.0528 (5)0.0117 (4)0.0138 (3)0.0092 (4)
F10.0792 (15)0.0871 (14)0.0939 (17)−0.0334 (11)0.0379 (13)0.0012 (12)
N10.0456 (13)0.0597 (13)0.0304 (13)−0.0075 (11)0.0170 (10)−0.0029 (10)
O10.0661 (15)0.0934 (16)0.0314 (11)−0.0216 (11)0.0221 (10)−0.0078 (10)
C10.0450 (15)0.0521 (15)0.0278 (15)0.0011 (13)0.0145 (12)0.0014 (12)
C20.0434 (15)0.0422 (14)0.0235 (13)−0.0018 (12)0.0101 (11)−0.0035 (10)
C30.0473 (16)0.0376 (13)0.0340 (15)0.0002 (11)0.0133 (13)−0.0045 (11)
C40.0416 (16)0.0548 (16)0.0473 (17)−0.0005 (13)0.0122 (13)−0.0097 (14)
C50.060 (2)0.0530 (17)0.056 (2)−0.0156 (18)0.0290 (18)−0.0052 (14)
C60.070 (2)0.0450 (17)0.0436 (18)−0.0034 (14)0.0226 (16)0.0029 (13)
C70.0496 (18)0.0528 (16)0.0337 (15)0.0032 (13)0.0097 (14)−0.0016 (13)
C80.0431 (18)0.0492 (15)0.0410 (16)−0.0041 (13)0.0199 (14)−0.0049 (12)
C90.065 (2)0.0698 (19)0.057 (2)−0.0049 (17)0.0210 (17)0.0119 (17)
C100.088 (3)0.072 (2)0.090 (3)−0.018 (2)0.042 (3)0.014 (2)
C110.062 (3)0.084 (3)0.102 (3)−0.021 (2)0.034 (3)−0.005 (2)
C120.048 (2)0.088 (3)0.103 (3)−0.0086 (18)0.0121 (18)0.002 (2)
C130.056 (2)0.071 (2)0.062 (2)−0.0065 (17)0.0130 (17)0.0067 (16)
Cl1—C31.743 (3)C6—H60.9300
F1—C51.361 (4)C7—H70.9300
N1—C11.330 (4)C8—C131.362 (5)
N1—C81.424 (3)C8—C91.382 (4)
N1—H10.8600C9—C101.381 (5)
O1—C11.224 (3)C9—H90.9300
C1—C21.500 (4)C10—C111.363 (6)
C2—C31.377 (4)C10—H100.9300
C2—C71.392 (4)C11—C121.366 (6)
C3—C41.375 (4)C11—H110.9300
C4—C51.373 (4)C12—C131.383 (5)
C4—H40.9300C12—H120.9300
C5—C61.357 (5)C13—H130.9300
C6—C71.378 (4)
C1—N1—C8125.4 (2)C6—C7—C2122.0 (3)
C1—N1—H1117.3C6—C7—H7119.0
C8—N1—H1117.3C2—C7—H7119.0
O1—C1—N1124.3 (3)C13—C8—C9120.0 (3)
O1—C1—C2120.8 (2)C13—C8—N1119.7 (3)
N1—C1—C2114.9 (2)C9—C8—N1120.3 (3)
C3—C2—C7117.5 (2)C10—C9—C8118.9 (3)
C3—C2—C1122.1 (2)C10—C9—H9120.5
C7—C2—C1120.2 (2)C8—C9—H9120.5
C4—C3—C2122.2 (2)C11—C10—C9121.1 (3)
C4—C3—Cl1117.8 (2)C11—C10—H10119.5
C2—C3—Cl1119.92 (19)C9—C10—H10119.5
C5—C4—C3117.1 (3)C10—C11—C12119.8 (3)
C5—C4—H4121.5C10—C11—H11120.1
C3—C4—H4121.5C12—C11—H11120.1
C6—C5—F1118.8 (3)C11—C12—C13119.8 (4)
C6—C5—C4123.9 (3)C11—C12—H12120.1
F1—C5—C4117.3 (3)C13—C12—H12120.1
C5—C6—C7117.2 (3)C8—C13—C12120.5 (3)
C5—C6—H6121.4C8—C13—H13119.7
C7—C6—H6121.4C12—C13—H13119.7
C8—N1—C1—O12.1 (4)C4—C5—C6—C70.7 (4)
C8—N1—C1—C2−179.5 (2)C5—C6—C7—C2−1.6 (4)
O1—C1—C2—C3−58.5 (3)C3—C2—C7—C61.1 (4)
N1—C1—C2—C3123.1 (3)C1—C2—C7—C6−175.2 (2)
O1—C1—C2—C7117.5 (3)C1—N1—C8—C13−133.3 (3)
N1—C1—C2—C7−60.9 (3)C1—N1—C8—C949.8 (4)
C7—C2—C3—C40.5 (4)C13—C8—C9—C100.9 (5)
C1—C2—C3—C4176.6 (2)N1—C8—C9—C10177.8 (3)
C7—C2—C3—Cl1179.33 (19)C8—C9—C10—C11−1.0 (6)
C1—C2—C3—Cl1−4.5 (3)C9—C10—C11—C120.8 (6)
C2—C3—C4—C5−1.4 (4)C10—C11—C12—C13−0.4 (6)
Cl1—C3—C4—C5179.8 (2)C9—C8—C13—C12−0.5 (5)
C3—C4—C5—C60.7 (4)N1—C8—C13—C12−177.4 (3)
C3—C4—C5—F1−178.8 (2)C11—C12—C13—C80.2 (6)
F1—C5—C6—C7−179.8 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.862.042.857 (3)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.862.042.857 (3)159

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Investigations on the synthesis and pharmacological properties of amides of 7-methyl-3-phenyl-1-[2-hydroxy-3-(4-phenyl-1-piperazinyl)propyl]-2,4- dioxo-1,2,3,4-tetrahydropyrido[2,3-d]-pyrimidine-5-carboxylic acid.

Authors:  H Sladowska; M Sieklucka-Dziuba; G Rajtar; M Sadowski; Z Kleinrok
Journal:  Farmaco       Date:  1999 Nov-Dec
  2 in total

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