Literature DB >> 21583464

2-Amino-5-ethoxy-carbonyl-4-methyl-thia-zol-3-ium chloride monohydrate.

Jin Rui Lin1, Hong Zhao.   

Abstract

In the crystal structure of the title compound, C(7)H(11)N(2)O(2)S(+)·Cl(-)·H(2)O, the cations, anions and water mol-ecules are linked by inter-molecular N-H⋯O, N-H⋯Cl, O-H⋯O and O-H⋯Cl hydrogen bonds, forming layers stacked along [20].

Entities:  

Year:  2009        PMID: 21583464      PMCID: PMC2977512          DOI: 10.1107/S1600536809024532

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of thia­zole derivatives, see: Turan-Zitouni et al. (2003 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C7H11N2O2S+·Cl−·H2O M = 240.70 Monoclinic, a = 10.637 (2) Å b = 7.4463 (15) Å c = 15.082 (3) Å β = 110.22 (3)° V = 1121.0 (4) Å3 Z = 4 Mo Kα radiation μ = 0.51 mm−1 T = 292 K 0.40 × 0.32 × 0.28 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.821, T max = 0.868 11232 measured reflections 2564 independent reflections 2097 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.122 S = 1.12 2564 reflections 133 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.48 e Å−3 Δρmin = −0.21 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear ; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL/PC. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809024532/rz2337sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809024532/rz2337Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H11N2O2S+·Cl·H2OF(000) = 504
Mr = 240.70Dx = 1.426 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2280 reflections
a = 10.637 (2) Åθ = 2.3–27.4°
b = 7.4463 (15) ŵ = 0.51 mm1
c = 15.082 (3) ÅT = 292 K
β = 110.22 (3)°Block, colourless
V = 1121.0 (4) Å30.40 × 0.32 × 0.28 mm
Z = 4
Rigaku SCXmini diffractometer2564 independent reflections
Radiation source: fine-focus sealed tube2097 reflections with I > 2σ(I)
graphiteRint = 0.037
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 3.1°
ω scansh = −13→13
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −9→9
Tmin = 0.821, Tmax = 0.868l = −19→19
11232 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H atoms treated by a mixture of independent and constrained refinement
S = 1.12w = 1/[σ2(Fo2) + (0.0547P)2 + 0.5076P] where P = (Fo2 + 2Fc2)/3
2564 reflections(Δ/σ)max = 0.012
133 parametersΔρmax = 0.48 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5427 (2)0.4538 (3)0.14877 (16)0.0386 (5)
C20.3764 (2)0.2578 (3)0.06588 (16)0.0388 (5)
C30.3260 (3)0.0717 (3)0.0413 (2)0.0542 (7)
H3A0.24460.05630.05450.081*
H3B0.3920−0.01210.07810.081*
H3C0.30880.0508−0.02470.081*
C40.3170 (2)0.4157 (3)0.03211 (17)0.0411 (5)
C50.1833 (2)0.4419 (3)−0.03804 (17)0.0455 (6)
C60.0280 (3)0.6581 (4)−0.1270 (2)0.0616 (8)
H6A−0.04190.6052−0.10790.074*
H6B0.01990.6116−0.18880.074*
C70.0156 (3)0.8556 (5)−0.1302 (3)0.0850 (11)
H7A0.02480.9001−0.06860.128*
H7B−0.07060.8889−0.17420.128*
H7C0.08460.9063−0.15010.128*
Cl10.33656 (7)0.42792 (8)0.29075 (5)0.0540 (2)
N10.65955 (19)0.5069 (3)0.20741 (15)0.0499 (5)
H1A0.71820.42900.23800.060*
H1B0.67750.61970.21530.060*
N20.5037 (2)0.2825 (2)0.13088 (14)0.0391 (4)
O10.10510 (19)0.3235 (3)−0.07219 (16)0.0720 (6)
O20.15910 (17)0.6150 (2)−0.05873 (13)0.0544 (5)
O1W0.1705 (2)0.7502 (3)0.17716 (18)0.0799 (7)
H1C0.20760.63730.19370.120*
H1D0.08790.74430.15030.120*
S10.41995 (6)0.59887 (7)0.08238 (4)0.04234 (19)
H20.547 (2)0.198 (3)0.1547 (16)0.033 (6)*
U11U22U33U12U13U23
C10.0338 (11)0.0311 (10)0.0441 (12)0.0043 (8)0.0047 (9)0.0015 (9)
C20.0357 (11)0.0341 (11)0.0414 (11)−0.0007 (9)0.0067 (9)0.0003 (9)
C30.0496 (15)0.0364 (12)0.0625 (16)−0.0065 (11)0.0014 (12)0.0003 (11)
C40.0343 (11)0.0361 (11)0.0463 (12)0.0002 (9)0.0056 (9)0.0017 (10)
C50.0342 (12)0.0447 (13)0.0498 (13)0.0033 (10)0.0048 (10)0.0023 (11)
C60.0406 (14)0.0564 (16)0.0654 (17)0.0121 (12)−0.0103 (12)−0.0003 (13)
C70.0572 (19)0.0549 (18)0.110 (3)0.0138 (15)−0.0128 (18)0.0051 (18)
Cl10.0531 (4)0.0343 (3)0.0627 (4)−0.0034 (2)0.0047 (3)−0.0010 (3)
N10.0366 (10)0.0341 (10)0.0610 (13)0.0021 (8)−0.0061 (9)0.0015 (9)
N20.0359 (10)0.0284 (9)0.0443 (10)0.0058 (8)0.0028 (8)0.0030 (8)
O10.0430 (11)0.0534 (12)0.0924 (15)−0.0044 (9)−0.0112 (10)0.0004 (11)
O20.0409 (9)0.0456 (10)0.0582 (10)0.0083 (7)−0.0064 (8)0.0013 (8)
O1W0.0451 (11)0.0465 (11)0.1127 (17)−0.0019 (9)−0.0180 (11)−0.0051 (11)
S10.0357 (3)0.0299 (3)0.0515 (3)0.0048 (2)0.0024 (2)0.0036 (2)
C1—N11.313 (3)C6—O21.454 (3)
C1—N21.339 (3)C6—C71.476 (4)
C1—S11.724 (2)C6—H6A0.9700
C2—C41.348 (3)C6—H6B0.9700
C2—N21.382 (3)C7—H7A0.9600
C2—C31.486 (3)C7—H7B0.9600
C3—H3A0.9600C7—H7C0.9600
C3—H3B0.9600N1—H1A0.8600
C3—H3C0.9600N1—H1B0.8600
C4—C51.463 (3)N2—H20.79 (3)
C4—S11.750 (2)O1W—H1C0.9259
C5—O11.199 (3)O1W—H1D0.8324
C5—O21.330 (3)
N1—C1—N2125.3 (2)C7—C6—H6A110.3
N1—C1—S1123.57 (17)O2—C6—H6B110.3
N2—C1—S1111.12 (16)C7—C6—H6B110.3
C4—C2—N2111.61 (19)H6A—C6—H6B108.5
C4—C2—C3129.6 (2)C6—C7—H7A109.5
N2—C2—C3118.8 (2)C6—C7—H7B109.5
C2—C3—H3A109.5H7A—C7—H7B109.5
C2—C3—H3B109.5C6—C7—H7C109.5
H3A—C3—H3B109.5H7A—C7—H7C109.5
C2—C3—H3C109.5H7B—C7—H7C109.5
H3A—C3—H3C109.5C1—N1—H1A120.0
H3B—C3—H3C109.5C1—N1—H1B120.0
C2—C4—C5126.9 (2)H1A—N1—H1B120.0
C2—C4—S1112.00 (17)C1—N2—C2115.39 (18)
C5—C4—S1121.05 (17)C1—N2—H2125.1 (18)
O1—C5—O2124.2 (2)C2—N2—H2119.5 (18)
O1—C5—C4124.7 (2)C5—O2—C6116.1 (2)
O2—C5—C4111.1 (2)H1C—O1W—H1D111.3
O2—C6—C7107.3 (2)C1—S1—C489.88 (11)
O2—C6—H6A110.3
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1Wi0.861.942.789 (3)169
N1—H1B···Cl1ii0.862.303.135 (2)164
O1W—H1C···Cl10.932.253.118 (2)156
O1W—H1D···O1iii0.832.052.863 (3)167
N2—H2···Cl1i0.79 (3)2.35 (3)3.141 (2)173 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1Wi0.861.942.789 (3)169
N1—H1B⋯Cl1ii0.862.303.135 (2)164
O1W—H1C⋯Cl10.932.253.118 (2)156
O1W—H1D⋯O1iii0.832.052.863 (3)167
N2—H2⋯Cl1i0.79 (3)2.35 (3)3.141 (2)173 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis of some 2-[(benzazole-2-yl)thioacetylamino]thiazole derivatives and their antimicrobial activity and toxicity.

Authors:  Gülhan Turan-Zitouni; Seref Demirayak; Ahmet Ozdemir; Zafer Asim Kaplancikli; Mehmet Taha Yildiz
Journal:  Eur J Med Chem       Date:  2004-03       Impact factor: 6.514

  2 in total

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