| Literature DB >> 21583460 |
Li Song, Wenxiang Chai, Junwei Lan.
Abstract
The organic mol-ecule of the title compound, C(18)H(14)N(4)O(2)·H(2)O, lies on a center of inversion located at the centre of the central phenyl-ene ring. There are two half-molecules in the asymmetric unit. In the crystal, the mol-ecules are linked through by N-H⋯O and O-H⋯N hydrogen bonds involving the water mol-ecule, forming a layer structure. The layers inter-act by π-π inter-actions between the aromatic rings.Entities:
Year: 2009 PMID: 21583460 PMCID: PMC2977464 DOI: 10.1107/S1600536809024684
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H14N4O2·H2O | |
| Triclinic, | |
| Mo | |
| θ = 3.1–27.5° | |
| µ = 0.10 mm−1 | |
| α = 95.98 (3)° | |
| β = 106.36 (3)° | Block, colorless |
| γ = 94.68 (3)° | 0.32 × 0.21 × 0.13 mm |
| Rigaku R-AXIS RAPID diffractometer | 3671 independent reflections |
| Radiation source: fine-focus sealed tube | 1782 reflections with |
| Graphite Monochromator | |
| ω scans | θmax = 27.5°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 7994 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3671 reflections | Δρmax = 0.24 e Å−3 |
| 235 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.014 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.5143 (3) | 0.75658 (16) | 0.44339 (18) | 0.0695 (6) | |
| N1 | 0.3107 (4) | 0.4128 (2) | 0.0888 (2) | 0.0784 (8) | |
| C1 | 0.2062 (5) | 0.4882 (3) | 0.1391 (3) | 0.0791 (9) | |
| H1 | 0.0645 | 0.4691 | 0.1150 | 0.095* | |
| O2 | 0.1628 (3) | 0.77553 (17) | 0.78063 (19) | 0.0773 (6) | |
| N2 | 0.7556 (3) | 0.79239 (16) | 0.34696 (18) | 0.0511 (5) | |
| H2A | 0.7946 | 0.7654 | 0.2822 | 0.061* | |
| C2 | 0.2908 (4) | 0.5924 (2) | 0.2241 (3) | 0.0667 (7) | |
| H2 | 0.2090 | 0.6436 | 0.2569 | 0.080* | |
| O3 | 0.1253 (3) | 0.2348 (2) | −0.12516 (19) | 0.0774 (7) | |
| N3 | 0.7983 (4) | 1.0595 (2) | 0.8737 (2) | 0.0693 (7) | |
| C3 | 0.4971 (4) | 0.6211 (2) | 0.2608 (2) | 0.0507 (6) | |
| N4 | 0.2782 (3) | 0.70930 (17) | 0.61858 (19) | 0.0545 (5) | |
| H4A | 0.3716 | 0.7266 | 0.5825 | 0.065* | |
| C4 | 0.6076 (4) | 0.5436 (2) | 0.2091 (2) | 0.0557 (7) | |
| H4 | 0.7495 | 0.5607 | 0.2313 | 0.067* | |
| C5 | 0.5096 (5) | 0.4414 (2) | 0.1251 (3) | 0.0680 (8) | |
| H5 | 0.5877 | 0.3882 | 0.0911 | 0.082* | |
| C6 | 0.5894 (4) | 0.7301 (2) | 0.3589 (2) | 0.0522 (6) | |
| C7 | 0.8750 (3) | 0.89703 (19) | 0.4275 (2) | 0.0458 (6) | |
| C8 | 0.8041 (4) | 0.9772 (2) | 0.5031 (2) | 0.0558 (7) | |
| H8 | 0.6698 | 0.9625 | 0.5058 | 0.067* | |
| C9 | 1.0706 (4) | 0.9205 (2) | 0.4249 (2) | 0.0556 (6) | |
| H9 | 1.1201 | 0.8653 | 0.3725 | 0.067* | |
| C10 | 0.6170 (4) | 1.0792 (2) | 0.8812 (3) | 0.0671 (8) | |
| H10 | 0.6015 | 1.1572 | 0.9219 | 0.081* | |
| C11 | 0.4505 (4) | 0.9927 (2) | 0.8333 (2) | 0.0582 (7) | |
| H11 | 0.3243 | 1.0105 | 0.8426 | 0.070* | |
| C12 | 0.4690 (4) | 0.8799 (2) | 0.7717 (2) | 0.0517 (6) | |
| C13 | 0.6558 (4) | 0.8578 (2) | 0.7638 (3) | 0.0612 (7) | |
| H13 | 0.6748 | 0.7810 | 0.7224 | 0.073* | |
| C14 | 0.8155 (4) | 0.9488 (3) | 0.8169 (3) | 0.0712 (8) | |
| H14 | 0.9447 | 0.9316 | 0.8128 | 0.085* | |
| C15 | 0.2873 (4) | 0.7842 (2) | 0.7236 (3) | 0.0558 (6) | |
| H15 | 0.173 (6) | 0.289 (3) | −0.050 (4) | 0.135 (14)* | |
| C16 | 0.1331 (3) | 0.6052 (2) | 0.5602 (2) | 0.0483 (6) | |
| H16 | 0.026 (6) | 0.191 (4) | −0.110 (4) | 0.130 (14)* | |
| C17 | −0.0548 (4) | 0.5897 (2) | 0.5761 (2) | 0.0569 (7) | |
| H17 | −0.0939 | 0.6510 | 0.6283 | 0.068* | |
| C18 | 0.1870 (4) | 0.5146 (2) | 0.4836 (2) | 0.0563 (7) | |
| H18 | 0.3165 | 0.5244 | 0.4720 | 0.068* |
| O1 | 0.0723 (13) | 0.0736 (12) | 0.0619 (12) | −0.0209 (9) | 0.0365 (11) | −0.0191 (9) |
| N1 | 0.101 (2) | 0.0679 (15) | 0.0548 (16) | −0.0267 (14) | 0.0189 (15) | −0.0060 (12) |
| C1 | 0.070 (2) | 0.091 (2) | 0.0567 (19) | −0.0302 (16) | 0.0055 (16) | −0.0115 (16) |
| O2 | 0.0662 (13) | 0.0869 (13) | 0.0788 (15) | −0.0163 (10) | 0.0395 (11) | −0.0206 (10) |
| N2 | 0.0530 (12) | 0.0506 (11) | 0.0433 (12) | −0.0092 (9) | 0.0136 (9) | −0.0091 (8) |
| C2 | 0.0580 (17) | 0.0734 (17) | 0.0593 (18) | −0.0111 (13) | 0.0120 (14) | −0.0043 (14) |
| O3 | 0.0852 (15) | 0.0810 (13) | 0.0592 (13) | −0.0318 (11) | 0.0332 (12) | −0.0226 (10) |
| N3 | 0.0677 (16) | 0.0679 (14) | 0.0659 (16) | −0.0140 (11) | 0.0201 (13) | −0.0044 (12) |
| C3 | 0.0562 (16) | 0.0519 (13) | 0.0396 (14) | −0.0060 (11) | 0.0122 (12) | 0.0012 (10) |
| N4 | 0.0539 (13) | 0.0534 (11) | 0.0528 (13) | −0.0095 (9) | 0.0181 (10) | −0.0038 (9) |
| C4 | 0.0661 (17) | 0.0486 (13) | 0.0466 (15) | −0.0039 (11) | 0.0126 (13) | −0.0002 (11) |
| C5 | 0.094 (2) | 0.0542 (15) | 0.0542 (17) | −0.0023 (14) | 0.0240 (16) | 0.0021 (12) |
| C6 | 0.0523 (15) | 0.0524 (14) | 0.0472 (15) | −0.0070 (11) | 0.0130 (12) | 0.0000 (11) |
| C7 | 0.0471 (14) | 0.0471 (12) | 0.0387 (13) | −0.0033 (10) | 0.0110 (11) | −0.0035 (10) |
| C8 | 0.0473 (14) | 0.0605 (14) | 0.0546 (16) | −0.0063 (11) | 0.0176 (12) | −0.0122 (12) |
| C9 | 0.0536 (15) | 0.0536 (13) | 0.0558 (16) | −0.0037 (11) | 0.0198 (13) | −0.0126 (11) |
| C10 | 0.071 (2) | 0.0572 (15) | 0.0680 (19) | −0.0055 (13) | 0.0215 (16) | −0.0059 (13) |
| C11 | 0.0575 (16) | 0.0543 (14) | 0.0620 (17) | 0.0015 (11) | 0.0206 (14) | −0.0006 (12) |
| C12 | 0.0530 (16) | 0.0498 (13) | 0.0489 (15) | −0.0001 (10) | 0.0123 (12) | 0.0032 (11) |
| C13 | 0.0532 (16) | 0.0585 (15) | 0.0693 (19) | −0.0023 (12) | 0.0219 (14) | −0.0072 (13) |
| C14 | 0.0575 (18) | 0.0773 (18) | 0.075 (2) | −0.0038 (14) | 0.0213 (15) | −0.0022 (15) |
| C15 | 0.0544 (16) | 0.0547 (14) | 0.0558 (17) | −0.0018 (11) | 0.0171 (13) | −0.0006 (12) |
| C16 | 0.0444 (14) | 0.0488 (13) | 0.0488 (15) | −0.0018 (10) | 0.0121 (11) | 0.0030 (11) |
| C17 | 0.0500 (15) | 0.0582 (14) | 0.0600 (17) | −0.0005 (11) | 0.0188 (13) | −0.0058 (12) |
| C18 | 0.0470 (15) | 0.0604 (15) | 0.0599 (17) | −0.0030 (11) | 0.0194 (13) | −0.0031 (12) |
| O1—C6 | 1.232 (3) | C5—H5 | 0.9500 |
| N1—C1 | 1.327 (4) | C7—C8 | 1.372 (3) |
| N1—C5 | 1.335 (4) | C7—C9 | 1.380 (3) |
| C1—C2 | 1.375 (4) | C8—C9i | 1.383 (3) |
| C1—H1 | 0.9500 | C8—H8 | 0.9500 |
| O2—C15 | 1.223 (3) | C9—C8i | 1.383 (3) |
| N2—C6 | 1.343 (3) | C9—H9 | 0.9500 |
| N2—C7 | 1.420 (3) | C10—C11 | 1.375 (3) |
| N2—H2A | 0.8800 | C10—H10 | 0.9500 |
| C2—C3 | 1.383 (3) | C11—C12 | 1.377 (3) |
| C2—H2 | 0.9500 | C11—H11 | 0.9500 |
| O3—H15 | 0.94 (4) | C12—C13 | 1.373 (3) |
| O3—H16 | 0.87 (4) | C12—C15 | 1.506 (3) |
| N3—C10 | 1.327 (3) | C13—C14 | 1.378 (4) |
| N3—C14 | 1.333 (3) | C13—H13 | 0.9500 |
| C3—C4 | 1.379 (3) | C14—H14 | 0.9500 |
| C3—C6 | 1.498 (3) | C16—C17 | 1.375 (3) |
| N4—C15 | 1.348 (3) | C16—C18 | 1.387 (3) |
| N4—C16 | 1.422 (3) | C17—C18ii | 1.382 (3) |
| N4—H4A | 0.8800 | C17—H17 | 0.9500 |
| C4—C5 | 1.375 (3) | C18—C17ii | 1.382 (3) |
| C4—H4 | 0.9500 | C18—H18 | 0.9500 |
| C1—N1—C5 | 116.7 (2) | C9i—C8—H8 | 120.2 |
| N1—C1—C2 | 124.0 (3) | C7—C9—C8i | 121.2 (2) |
| N1—C1—H1 | 118.0 | C7—C9—H9 | 119.4 |
| C2—C1—H1 | 118.0 | C8i—C9—H9 | 119.4 |
| C6—N2—C7 | 127.0 (2) | N3—C10—C11 | 123.5 (2) |
| C6—N2—H2A | 116.5 | N3—C10—H10 | 118.2 |
| C7—N2—H2A | 116.5 | C11—C10—H10 | 118.2 |
| C1—C2—C3 | 118.8 (3) | C10—C11—C12 | 119.2 (2) |
| C1—C2—H2 | 120.6 | C10—C11—H11 | 120.4 |
| C3—C2—H2 | 120.6 | C12—C11—H11 | 120.4 |
| H15—O3—H16 | 100 (3) | C13—C12—C11 | 118.0 (2) |
| C10—N3—C14 | 116.8 (2) | C13—C12—C15 | 123.2 (2) |
| C4—C3—C2 | 117.9 (2) | C11—C12—C15 | 118.7 (2) |
| C4—C3—C6 | 123.4 (2) | C12—C13—C14 | 119.0 (2) |
| C2—C3—C6 | 118.6 (2) | C12—C13—H13 | 120.5 |
| C15—N4—C16 | 126.6 (2) | C14—C13—H13 | 120.5 |
| C15—N4—H4A | 116.7 | N3—C14—C13 | 123.5 (3) |
| C16—N4—H4A | 116.7 | N3—C14—H14 | 118.3 |
| C5—C4—C3 | 119.1 (3) | C13—C14—H14 | 118.3 |
| C5—C4—H4 | 120.5 | O2—C15—N4 | 124.2 (2) |
| C3—C4—H4 | 120.5 | O2—C15—C12 | 120.4 (2) |
| N1—C5—C4 | 123.5 (3) | N4—C15—C12 | 115.4 (2) |
| N1—C5—H5 | 118.2 | C17—C16—C18 | 118.9 (2) |
| C4—C5—H5 | 118.2 | C17—C16—N4 | 123.8 (2) |
| O1—C6—N2 | 124.6 (2) | C18—C16—N4 | 117.3 (2) |
| O1—C6—C3 | 120.3 (2) | C16—C17—C18ii | 120.2 (2) |
| N2—C6—C3 | 115.1 (2) | C16—C17—H17 | 119.9 |
| C8—C7—C9 | 119.1 (2) | C18ii—C17—H17 | 119.9 |
| C8—C7—N2 | 123.6 (2) | C17ii—C18—C16 | 120.8 (2) |
| C9—C7—N2 | 117.2 (2) | C17ii—C18—H18 | 119.6 |
| C7—C8—C9i | 119.6 (2) | C16—C18—H18 | 119.6 |
| C7—C8—H8 | 120.2 |
| H··· | ||||
| N2—H2A···O3iii | 0.88 | 2.00 | 2.847 (3) | 160 |
| N4—H4A···O1 | 0.88 | 2.12 | 2.968 (3) | 161 |
| O3—H15···N1 | 0.94 (4) | 1.92 (4) | 2.845 (3) | 168 (3) |
| O3—H16···N3iv | 0.87 (4) | 2.01 (4) | 2.849 (3) | 162 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.88 | 2.00 | 2.847 (3) | 160 |
| N4—H4 | 0.88 | 2.12 | 2.968 (3) | 161 |
| O3—H15⋯N1 | 0.94 (4) | 1.92 (4) | 2.845 (3) | 168 (3) |
| O3—H16⋯N3ii | 0.87 (4) | 2.01 (4) | 2.849 (3) | 162 (4) |
Symmetry codes: (i) ; (ii) .