Literature DB >> 21583455

(Z)-N'-(4-Hydr-oxy-4-methyl-pentan-2-yl-idene)-2-(8-quinol-yloxy)acetohydrazide.

Li-Zi Yin1, De-Guang Song, Song-Cai Liu.   

Abstract

The title compound, C(17)H(21)N(3)O(3), has a Z configuration about the N=N double bond. The molecular conformation is stabilized by intramolecular N-H⋯O and O-H⋯N hydrogen bonds.

Entities:  

Year:  2009        PMID: 21583455      PMCID: PMC2977343          DOI: 10.1107/S1600536809024957

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the potential pharmacological and anti­tumor properties of acidamide compounds, see: Harrop et al. (2003 ▶); Ren et al. (2002 ▶). For related structures, see: Lei et al. (2008 ▶); Yang et al. (2007 ▶).

Experimental

Crystal data

C17H21N3O3 M = 315.37 Orthorhombic, a = 9.3297 (12) Å b = 10.1621 (13) Å c = 18.213 (2) Å V = 1726.7 (4) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 273 K 0.20 × 0.18 × 0.15 mm

Data collection

Rigaku Saturn 724+ CCD detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2000 ▶) T min = 0.983, T max = 0.987 9084 measured reflections 1761 independent reflections 1593 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.101 S = 1.04 1761 reflections 212 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.16 e Å−3 Data collection: CrystalClear (Rigaku, 2000 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809024957/fj2222sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809024957/fj2222Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H21N3O3F(000) = 672
Mr = 315.37Dx = 1.213 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 4517 reflections
a = 9.3297 (12) Åθ = 2.2–24.9°
b = 10.1621 (13) ŵ = 0.09 mm1
c = 18.213 (2) ÅT = 273 K
V = 1726.7 (4) Å3Block, colorless
Z = 40.20 × 0.18 × 0.15 mm
Rigaku Saturn 724+ CCD detector diffractometer1761 independent reflections
Radiation source: fine-focus sealed tube1593 reflections with I > 2σ(I)
graphiteRint = 0.025
Detector resolution: 9 pixels mm-1θmax = 25.0°, θmin = 2.2°
ω scansh = −11→10
Absorption correction: multi-scan (CrystalClear; Rigaku, 2000)k = −12→11
Tmin = 0.983, Tmax = 0.987l = −20→21
9084 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0681P)2 + 0.1302P] where P = (Fo2 + 2Fc2)/3
1761 reflections(Δ/σ)max = 0.001
212 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.16 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O1−0.14080 (16)−0.04549 (14)0.89142 (8)0.0517 (4)
O2−0.0517 (2)−0.26572 (17)1.03499 (9)0.0689 (5)
O30.06563 (17)0.17486 (16)0.93454 (10)0.0610 (4)
H30.05650.14300.89340.091*
N1−0.0639 (2)0.1419 (2)0.79583 (10)0.0575 (5)
N20.03984 (19)−0.06920 (18)0.99886 (10)0.0520 (4)
H20.0391−0.00950.96540.062*
N30.1400 (2)−0.06223 (19)1.05559 (10)0.0570 (5)
C1−0.0301 (3)0.2370 (3)0.74871 (15)0.0738 (7)
H10.05750.27910.75510.089*
C2−0.1156 (4)0.2780 (3)0.69090 (14)0.0781 (8)
H2A−0.08600.34580.66010.094*
C3−0.2431 (3)0.2174 (3)0.68019 (13)0.0717 (8)
H3A−0.30140.24250.64120.086*
C4−0.2882 (3)0.1155 (2)0.72835 (12)0.0578 (6)
C5−0.4203 (3)0.0503 (3)0.72093 (14)0.0721 (7)
H5−0.48270.07290.68320.087*
C6−0.4560 (3)−0.0455 (3)0.76902 (15)0.0750 (7)
H6−0.5429−0.08920.76320.090*
C7−0.3655 (3)−0.0816 (3)0.82796 (13)0.0628 (6)
H7−0.3934−0.14690.86070.075*
C8−0.2363 (2)−0.0194 (2)0.83633 (11)0.0478 (5)
C9−0.1937 (2)0.0816 (2)0.78632 (11)0.0488 (5)
C10−0.1728 (2)−0.1518 (2)0.94005 (12)0.0542 (5)
H10A−0.1828−0.23260.91220.065*
H10B−0.2628−0.13490.96490.065*
C11−0.0544 (2)−0.1672 (2)0.99604 (11)0.0492 (5)
C120.2509 (3)0.0078 (2)1.04208 (14)0.0640 (6)
C130.2906 (3)0.0687 (3)0.96876 (16)0.0684 (7)
H13A0.26990.00510.93050.082*
H13B0.39320.08410.96840.082*
C140.2151 (3)0.1985 (3)0.94902 (19)0.0747 (8)
C150.3571 (4)0.0213 (3)1.10411 (19)0.1010 (12)
H15A0.4434−0.02521.09200.151*
H15B0.3167−0.01491.14820.151*
H15C0.37860.11271.11170.151*
C160.2178 (4)0.2961 (3)1.0126 (3)0.1322 (18)
H16A0.16060.26291.05230.198*
H16B0.17970.37910.99650.198*
H16C0.31470.30801.02900.198*
C170.2846 (4)0.2557 (5)0.8806 (3)0.156 (2)
H17A0.23520.33460.86650.234*
H17B0.27920.19270.84130.234*
H17C0.38320.27570.89060.234*
U11U22U33U12U13U23
O10.0499 (8)0.0465 (8)0.0587 (8)−0.0073 (7)−0.0036 (7)0.0125 (7)
O20.0794 (11)0.0569 (9)0.0705 (10)−0.0125 (9)−0.0105 (9)0.0225 (8)
O30.0504 (8)0.0505 (9)0.0819 (10)−0.0052 (7)−0.0098 (8)0.0055 (8)
N10.0578 (11)0.0573 (11)0.0576 (10)−0.0058 (10)0.0067 (9)0.0118 (9)
N20.0524 (10)0.0476 (9)0.0559 (9)−0.0032 (8)−0.0013 (8)0.0081 (8)
N30.0623 (11)0.0507 (10)0.0580 (10)−0.0003 (9)−0.0067 (9)−0.0015 (9)
C10.0736 (17)0.0745 (17)0.0733 (15)−0.0074 (14)0.0140 (14)0.0225 (14)
C20.089 (2)0.0799 (18)0.0652 (15)0.0027 (17)0.0173 (15)0.0288 (14)
C30.086 (2)0.0785 (17)0.0504 (12)0.0184 (16)0.0044 (13)0.0145 (12)
C40.0641 (14)0.0624 (14)0.0468 (11)0.0124 (11)0.0033 (10)−0.0003 (10)
C50.0668 (15)0.0862 (19)0.0634 (13)0.0068 (15)−0.0140 (12)0.0047 (15)
C60.0607 (14)0.0828 (18)0.0814 (16)−0.0112 (14)−0.0151 (13)0.0023 (15)
C70.0557 (14)0.0650 (14)0.0677 (13)−0.0069 (12)−0.0026 (11)0.0073 (12)
C80.0501 (11)0.0445 (10)0.0487 (10)0.0018 (9)0.0024 (9)−0.0001 (8)
C90.0541 (12)0.0448 (10)0.0475 (10)0.0065 (10)0.0069 (9)−0.0008 (9)
C100.0549 (12)0.0460 (11)0.0616 (12)−0.0079 (10)0.0025 (10)0.0130 (10)
C110.0518 (11)0.0444 (11)0.0513 (10)−0.0004 (10)0.0060 (9)0.0059 (9)
C120.0616 (13)0.0463 (11)0.0839 (15)0.0000 (11)−0.0131 (13)0.0044 (11)
C130.0457 (12)0.0603 (13)0.0992 (17)−0.0002 (11)−0.0014 (13)0.0088 (14)
C140.0490 (13)0.0541 (13)0.121 (2)−0.0120 (11)−0.0157 (15)0.0222 (15)
C150.105 (3)0.0767 (19)0.121 (2)−0.0196 (19)−0.051 (2)0.0065 (19)
C160.100 (3)0.0574 (17)0.239 (5)0.0046 (17)−0.081 (3)−0.032 (2)
C170.064 (2)0.174 (4)0.231 (5)−0.028 (2)−0.006 (3)0.137 (4)
O1—C81.368 (2)C7—C81.370 (3)
O1—C101.429 (2)C7—H70.9300
O2—C111.228 (3)C8—C91.429 (3)
O3—C141.440 (3)C10—C111.512 (3)
O3—H30.8200C10—H10A0.9700
N1—C11.331 (3)C10—H10B0.9700
N1—C91.368 (3)C12—C151.508 (4)
N2—C111.329 (3)C12—C131.518 (4)
N2—N31.395 (3)C13—C141.538 (4)
N2—H20.8600C13—H13A0.9700
N3—C121.280 (3)C13—H13B0.9700
C1—C21.385 (4)C14—C171.520 (5)
C1—H10.9300C14—C161.525 (5)
C2—C31.354 (4)C15—H15A0.9600
C2—H2A0.9300C15—H15B0.9600
C3—C41.421 (4)C15—H15C0.9600
C3—H3A0.9300C16—H16A0.9600
C4—C51.406 (4)C16—H16B0.9600
C4—C91.418 (3)C16—H16C0.9600
C5—C61.351 (4)C17—H17A0.9600
C5—H50.9300C17—H17B0.9600
C6—C71.414 (4)C17—H17C0.9600
C6—H60.9300
C8—O1—C10117.74 (16)C11—C10—H10B109.6
C14—O3—H3109.5H10A—C10—H10B108.2
C1—N1—C9117.0 (2)O2—C11—N2125.1 (2)
C11—N2—N3120.64 (17)O2—C11—C10119.26 (19)
C11—N2—H2119.7N2—C11—C10115.61 (17)
N3—N2—H2119.7N3—C12—C15115.9 (2)
C12—N3—N2115.31 (18)N3—C12—C13126.4 (2)
N1—C1—C2124.9 (3)C15—C12—C13117.5 (2)
N1—C1—H1117.5C12—C13—C14116.3 (2)
C2—C1—H1117.5C12—C13—H13A108.2
C3—C2—C1118.6 (3)C14—C13—H13A108.2
C3—C2—H2A120.7C12—C13—H13B108.2
C1—C2—H2A120.7C14—C13—H13B108.2
C2—C3—C4120.2 (2)H13A—C13—H13B107.4
C2—C3—H3A119.9O3—C14—C17109.0 (3)
C4—C3—H3A119.9O3—C14—C16105.3 (3)
C5—C4—C9120.2 (2)C17—C14—C16111.5 (3)
C5—C4—C3122.9 (2)O3—C14—C13110.1 (2)
C9—C4—C3116.9 (2)C17—C14—C13108.9 (3)
C6—C5—C4119.6 (2)C16—C14—C13111.9 (3)
C6—C5—H5120.2C12—C15—H15A109.5
C4—C5—H5120.2C12—C15—H15B109.5
C5—C6—C7122.1 (3)H15A—C15—H15B109.5
C5—C6—H6119.0C12—C15—H15C109.5
C7—C6—H6119.0H15A—C15—H15C109.5
C8—C7—C6119.4 (2)H15B—C15—H15C109.5
C8—C7—H7120.3C14—C16—H16A109.5
C6—C7—H7120.3C14—C16—H16B109.5
O1—C8—C7124.42 (19)H16A—C16—H16B109.5
O1—C8—C9115.21 (18)C14—C16—H16C109.5
C7—C8—C9120.4 (2)H16A—C16—H16C109.5
N1—C9—C4122.4 (2)H16B—C16—H16C109.5
N1—C9—C8119.15 (19)C14—C17—H17A109.5
C4—C9—C8118.4 (2)C14—C17—H17B109.5
O1—C10—C11110.08 (17)H17A—C17—H17B109.5
O1—C10—H10A109.6C14—C17—H17C109.5
C11—C10—H10A109.6H17A—C17—H17C109.5
O1—C10—H10B109.6H17B—C17—H17C109.5
C11—N2—N3—C12159.0 (2)C5—C4—C9—C8−0.1 (3)
C9—N1—C1—C2−0.6 (4)C3—C4—C9—C8179.3 (2)
N1—C1—C2—C3−0.5 (5)O1—C8—C9—N11.0 (3)
C1—C2—C3—C41.0 (4)C7—C8—C9—N1−179.8 (2)
C2—C3—C4—C5178.9 (3)O1—C8—C9—C4−179.09 (18)
C2—C3—C4—C9−0.4 (3)C7—C8—C9—C40.1 (3)
C9—C4—C5—C6−0.5 (4)C8—O1—C10—C11178.94 (17)
C3—C4—C5—C6−179.8 (3)N3—N2—C11—O2−9.8 (3)
C4—C5—C6—C71.1 (4)N3—N2—C11—C10169.88 (18)
C5—C6—C7—C8−1.1 (4)O1—C10—C11—O2−168.6 (2)
C10—O1—C8—C75.2 (3)O1—C10—C11—N211.7 (3)
C10—O1—C8—C9−175.65 (17)N2—N3—C12—C15177.3 (2)
C6—C7—C8—O1179.5 (2)N2—N3—C12—C13−7.7 (3)
C6—C7—C8—C90.4 (3)N3—C12—C13—C1481.1 (3)
C1—N1—C9—C41.3 (3)C15—C12—C13—C14−104.0 (3)
C1—N1—C9—C8−178.8 (2)C12—C13—C14—O3−69.5 (3)
C5—C4—C9—N1179.8 (2)C12—C13—C14—C17171.0 (3)
C3—C4—C9—N1−0.8 (3)C12—C13—C14—C1647.2 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3···N10.822.102.820 (3)146
N2—H2···O30.861.972.753 (2)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯N10.822.102.820 (3)146
N2—H2⋯O30.861.972.753 (2)151
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, biological evaluation, and quantitative structure-activity relationship analysis of new Schiff bases of hydroxysemicarbazide as potential antitumor agents.

Authors:  Shijun Ren; Rubin Wang; Kenichi Komatsu; Patricia Bonaz-Krause; Yegor Zyrianov; Charles E McKenna; Csaba Csipke; Zoltan A Tokes; Eric J Lien
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3.  Dioxygen activation by a dinuclear nickel thiolate complex: structural characterization of the ligand oxidized product.

Authors:  Todd C Harrop; Marilyn M Olmstead; Pradip K Mascharak
Journal:  Chem Commun (Camb)       Date:  2003-02-07       Impact factor: 6.222

4.  N'-(3-Eth-oxy-2-hydroxy-benzyl-idene)-3-hydroxy-naphthalene-2-carbohydrazide.

Authors:  Jun-Tao Lei; Yan-Xia Jiang; Li-Yan Tao; Shan-Shan Huang; Hou-Li Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-26
  4 in total

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