| Literature DB >> 21583415 |
Hua Yin1.
Abstract
The title complex, [Cd(C(6)Entities:
Year: 2009 PMID: 21583415 PMCID: PMC2977175 DOI: 10.1107/S1600536809028268
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C6H2N2O4)(H2O)3] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 4538 reflections |
| θ = 3.2–27.5° | |
| µ = 2.32 mm−1 | |
| β = 93.94 (3)° | Block, colourless |
| 0.25 × 0.23 × 0.18 mm | |
| Weissenberg IP diffractometer | 2129 independent reflections |
| Radiation source: rotor target | 1699 reflections with |
| graphite | |
| ω scans | θmax = 27.5°, θmin = 3.2° |
| Absorption correction: multi-scan ( | |
| 5659 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2129 reflections | (Δ/σ)max < 0.001 |
| 145 parameters | Δρmax = 0.82 e Å−3 |
| 9 restraints | Δρmin = −0.53 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cd1 | 0.07189 (6) | 0.372955 (14) | 0.31158 (2) | 0.02540 (10) | |
| O1 | 0.3289 (6) | 0.28668 (14) | 0.2181 (2) | 0.0294 (6) | |
| O2 | 0.4160 (6) | 0.15343 (17) | 0.1696 (2) | 0.0319 (7) | |
| O3 | 0.3399 (7) | −0.01740 (17) | 0.3172 (3) | 0.0434 (8) | |
| O4 | 0.1098 (7) | −0.00334 (19) | 0.1449 (3) | 0.0475 (9) | |
| O1W | 0.2872 (7) | 0.34613 (18) | 0.5126 (2) | 0.0374 (7) | |
| H1WA | 0.3989 | 0.3785 | 0.5318 | 0.056* | |
| H1WB | 0.1887 | 0.3401 | 0.5663 | 0.056* | |
| O2W | −0.2530 (6) | 0.37407 (15) | 0.1551 (3) | 0.0358 (7) | |
| H2WA | −0.3683 | 0.3410 | 0.1640 | 0.054* | |
| H2WB | −0.3071 | 0.4212 | 0.1323 | 0.054* | |
| O3W | −0.1846 (8) | 0.4335 (2) | 0.4320 (3) | 0.0583 (11) | |
| H3WA | −0.3095 | 0.4581 | 0.4013 | 0.088* | |
| H3WB | −0.1945 | 0.4277 | 0.5076 | 0.088* | |
| N1 | −0.0445 (7) | 0.23327 (16) | 0.3472 (3) | 0.0218 (7) | |
| N2 | −0.1324 (7) | 0.06150 (18) | 0.3781 (3) | 0.0253 (7) | |
| C1 | 0.0905 (7) | 0.17535 (19) | 0.2954 (3) | 0.0194 (7) | |
| C2 | 0.0436 (7) | 0.0893 (2) | 0.3109 (3) | 0.0195 (7) | |
| C3 | −0.2626 (8) | 0.1201 (2) | 0.4287 (3) | 0.0269 (8) | |
| H3A | −0.3866 | 0.1031 | 0.4763 | 0.032* | |
| C4 | −0.2215 (8) | 0.2060 (2) | 0.4137 (3) | 0.0242 (8) | |
| H4A | −0.3187 | 0.2453 | 0.4505 | 0.029* | |
| C5 | 0.2939 (8) | 0.2074 (2) | 0.2211 (3) | 0.0216 (7) | |
| C6 | 0.1817 (9) | 0.0189 (2) | 0.2531 (4) | 0.0279 (9) |
| Cd1 | 0.02614 (19) | 0.01735 (14) | 0.03381 (15) | 0.00158 (10) | 0.00999 (10) | 0.00080 (10) |
| O1 | 0.029 (2) | 0.0203 (10) | 0.0414 (13) | −0.0017 (11) | 0.0180 (12) | −0.0012 (10) |
| O2 | 0.027 (2) | 0.0258 (12) | 0.0445 (15) | −0.0003 (11) | 0.0184 (13) | −0.0045 (11) |
| O3 | 0.043 (3) | 0.0278 (13) | 0.0605 (19) | 0.0147 (14) | 0.0148 (16) | 0.0078 (13) |
| O4 | 0.044 (3) | 0.0526 (17) | 0.0482 (16) | −0.0186 (16) | 0.0185 (15) | −0.0300 (14) |
| O1W | 0.034 (2) | 0.0431 (14) | 0.0351 (14) | −0.0041 (13) | 0.0042 (12) | 0.0050 (12) |
| O2W | 0.031 (2) | 0.0274 (12) | 0.0480 (15) | −0.0044 (12) | −0.0024 (13) | 0.0038 (11) |
| O3W | 0.053 (3) | 0.089 (3) | 0.0332 (14) | 0.035 (2) | 0.0059 (15) | −0.0104 (16) |
| N1 | 0.023 (2) | 0.0185 (12) | 0.0247 (13) | −0.0002 (11) | 0.0056 (12) | −0.0004 (11) |
| N2 | 0.026 (2) | 0.0217 (13) | 0.0280 (14) | −0.0012 (12) | 0.0035 (13) | 0.0010 (11) |
| C1 | 0.022 (2) | 0.0166 (14) | 0.0198 (14) | 0.0019 (13) | −0.0002 (13) | −0.0009 (12) |
| C2 | 0.017 (2) | 0.0188 (14) | 0.0233 (14) | 0.0010 (13) | 0.0038 (13) | 0.0013 (12) |
| C3 | 0.024 (2) | 0.0299 (17) | 0.0273 (16) | −0.0027 (15) | 0.0085 (14) | −0.0003 (14) |
| C4 | 0.022 (2) | 0.0262 (16) | 0.0253 (15) | 0.0031 (14) | 0.0095 (14) | −0.0030 (13) |
| C5 | 0.021 (2) | 0.0202 (14) | 0.0236 (14) | 0.0020 (14) | 0.0031 (14) | −0.0020 (13) |
| C6 | 0.025 (3) | 0.0163 (14) | 0.044 (2) | −0.0037 (15) | 0.0156 (17) | −0.0055 (15) |
| Cd1—O3W | 2.218 (3) | O2W—H2WB | 0.8324 |
| Cd1—O1 | 2.265 (3) | O3W—H3WA | 0.8463 |
| Cd1—O3i | 2.294 (3) | O3W—H3WB | 0.8295 |
| Cd1—N1 | 2.334 (3) | N1—C1 | 1.332 (4) |
| Cd1—O2W | 2.397 (4) | N1—C4 | 1.334 (5) |
| Cd1—O1W | 2.451 (3) | N2—C3 | 1.317 (5) |
| O1—C5 | 1.265 (4) | N2—C2 | 1.337 (5) |
| O2—C5 | 1.245 (4) | C1—C2 | 1.393 (5) |
| O3—C6 | 1.226 (6) | C1—C5 | 1.522 (5) |
| O3—Cd1ii | 2.294 (3) | C2—C6 | 1.510 (5) |
| O4—C6 | 1.262 (5) | C3—C4 | 1.384 (5) |
| O1W—H1WA | 0.8214 | C3—H3A | 0.9300 |
| O1W—H1WB | 0.8327 | C4—H4A | 0.9300 |
| O2W—H2WA | 0.8385 | ||
| O3W—Cd1—O1 | 167.27 (11) | Cd1—O3W—H3WB | 128.5 |
| O3W—Cd1—O3i | 102.02 (13) | H3WA—O3W—H3WB | 109.3 |
| O1—Cd1—O3i | 90.61 (11) | C1—N1—C4 | 118.0 (3) |
| O3W—Cd1—N1 | 96.29 (14) | C1—N1—Cd1 | 113.8 (2) |
| O1—Cd1—N1 | 72.59 (11) | C4—N1—Cd1 | 128.2 (2) |
| O3i—Cd1—N1 | 152.11 (10) | C3—N2—C2 | 116.5 (3) |
| O3W—Cd1—O2W | 85.67 (14) | N1—C1—C2 | 119.9 (3) |
| O1—Cd1—O2W | 99.25 (12) | N1—C1—C5 | 117.4 (3) |
| O3i—Cd1—O2W | 75.44 (12) | C2—C1—C5 | 122.6 (3) |
| N1—Cd1—O2W | 85.28 (11) | N2—C2—C1 | 122.4 (3) |
| O3W—Cd1—O1W | 81.30 (13) | N2—C2—C6 | 113.7 (3) |
| O1—Cd1—O1W | 90.37 (12) | C1—C2—C6 | 124.0 (3) |
| O3i—Cd1—O1W | 123.85 (12) | N2—C3—C4 | 122.4 (4) |
| N1—Cd1—O1W | 79.40 (11) | N2—C3—H3A | 118.8 |
| O2W—Cd1—O1W | 158.60 (11) | C4—C3—H3A | 118.8 |
| C5—O1—Cd1 | 118.5 (2) | N1—C4—C3 | 120.9 (3) |
| C6—O3—Cd1ii | 100.6 (2) | N1—C4—H4A | 119.6 |
| Cd1—O1W—H1WA | 115.8 | C3—C4—H4A | 119.6 |
| Cd1—O1W—H1WB | 109.4 | O2—C5—O1 | 124.9 (3) |
| H1WA—O1W—H1WB | 114.9 | O2—C5—C1 | 117.5 (3) |
| Cd1—O2W—H2WA | 117.7 | O1—C5—C1 | 117.6 (3) |
| Cd1—O2W—H2WB | 117.3 | O3—C6—O4 | 124.5 (4) |
| H2WA—O2W—H2WB | 108.8 | O3—C6—C2 | 118.4 (3) |
| Cd1—O3W—H3WA | 120.9 | O4—C6—C2 | 116.7 (4) |
| O3W—Cd1—O1—C5 | 32.7 (8) | N1—C1—C2—N2 | −0.9 (6) |
| O3i—Cd1—O1—C5 | −154.6 (3) | C5—C1—C2—N2 | 178.7 (3) |
| N1—Cd1—O1—C5 | 2.8 (3) | N1—C1—C2—C6 | 178.3 (3) |
| O2W—Cd1—O1—C5 | −79.2 (3) | C5—C1—C2—C6 | −2.1 (6) |
| O1W—Cd1—O1—C5 | 81.6 (3) | C2—N2—C3—C4 | 0.1 (6) |
| O3W—Cd1—N1—C1 | −174.6 (3) | C1—N1—C4—C3 | 0.3 (6) |
| O1—Cd1—N1—C1 | −0.9 (2) | Cd1—N1—C4—C3 | −178.0 (3) |
| O3i—Cd1—N1—C1 | 54.4 (4) | N2—C3—C4—N1 | −0.5 (6) |
| O2W—Cd1—N1—C1 | 100.3 (3) | Cd1—O1—C5—O2 | 177.2 (3) |
| O1W—Cd1—N1—C1 | −94.7 (3) | Cd1—O1—C5—C1 | −4.1 (4) |
| O3W—Cd1—N1—C4 | 3.8 (4) | N1—C1—C5—O2 | −178.0 (3) |
| O1—Cd1—N1—C4 | 177.4 (4) | C2—C1—C5—O2 | 2.4 (5) |
| O3i—Cd1—N1—C4 | −127.3 (3) | N1—C1—C5—O1 | 3.3 (5) |
| O2W—Cd1—N1—C4 | −81.3 (3) | C2—C1—C5—O1 | −176.4 (4) |
| O1W—Cd1—N1—C4 | 83.7 (3) | Cd1ii—O3—C6—O4 | −2.1 (5) |
| C4—N1—C1—C2 | 0.4 (5) | Cd1ii—O3—C6—C2 | 171.1 (3) |
| Cd1—N1—C1—C2 | 178.9 (3) | N2—C2—C6—O3 | −81.2 (5) |
| C4—N1—C1—C5 | −179.2 (3) | C1—C2—C6—O3 | 99.6 (5) |
| Cd1—N1—C1—C5 | −0.7 (4) | N2—C2—C6—O4 | 92.5 (4) |
| C3—N2—C2—C1 | 0.6 (6) | C1—C2—C6—O4 | −86.7 (5) |
| C3—N2—C2—C6 | −178.6 (3) |
| H··· | ||||
| O1W—H1WA···O4iii | 0.82 | 2.56 | 3.328 (5) | 156 |
| O2W—H2WA···O1iv | 0.84 | 2.02 | 2.834 (5) | 164 |
| O2W—H2WB···N2v | 0.83 | 2.24 | 3.036 (4) | 161 |
| O3W—H3WA···O4v | 0.85 | 1.82 | 2.656 (6) | 169 |
| O3W—H3WB···O4vi | 0.83 | 2.25 | 2.865 (4) | 132 |
| O3W—H3WB···O2vi | 0.83 | 2.22 | 2.935 (4) | 144 |
Selected geometric parameters (Å, °)
| Cd1—O3 | 2.218 (3) |
| Cd1—O1 | 2.265 (3) |
| Cd1—O3i | 2.294 (3) |
| Cd1—N1 | 2.334 (3) |
| Cd1—O2 | 2.397 (4) |
| Cd1—O1 | 2.451 (3) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.82 | 2.56 | 3.328 (5) | 156 |
| O2 | 0.84 | 2.02 | 2.834 (5) | 164 |
| O2 | 0.83 | 2.24 | 3.036 (4) | 161 |
| O3 | 0.85 | 1.82 | 2.656 (6) | 169 |
| O3 | 0.83 | 2.25 | 2.865 (4) | 132 |
| O3 | 0.83 | 2.22 | 2.935 (4) | 144 |
Symmetry codes: (ii) ; (iii) ; (iv) ; (v) .