Literature DB >> 21583401

Hexaaqua-cobalt(II) bis-{[N-(4-meth-oxy-2-oxidobenzyl-idene)glycylglycinato]nickel(II)} hexa-hydrate.

Jiaxun Jiang1, Yao Lu, Limin Yuan, Wenlong Liu.   

Abstract

In the title compound, [Co(H(2)O)(6)][Ni(C(12)H(11)N(2)O(5))](2)·6H(2)O, the Ni(II) atom has a nearly square-planar coordination with two N and two O atoms of the N-(4-meth-oxy-2-oxidobenzyl-idene)glycylglycinate Schiff base ligand (L(3-)). The Co(II) atom sits on an inversion center and is coordinated to six aqua ligands in a slightly distorted octa-hedral geometry. The [Co(H(2)O)(6)](2+) cations and [NiL](-) anions form columns along the a axis by O-H⋯O hydrogen bonds. Additional hydrogen bonds between the uncoordinated and coordinated water molecules help to consolidate the crystal packing.

Entities:  

Year:  2009        PMID: 21583401      PMCID: PMC2977345          DOI: 10.1107/S1600536809026750

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures of the copper(II) analogues, see: Liu et al. (2006 ▶); Zou et al. (2004 ▶). For the magnetic properties of n class="Chemical">copper(II) heteronuclear complexes, see: Liu et al. (2004 ▶); Zou et al. (2003 ▶).

Experimental

Crystal data

[Co(H2O)6][Ni(C12n class="Species">H11N2O5)]2·6H2O M = 919.00 Triclinic, a = 7.9052 (8) Å b = 10.7595 (10) Å c = 11.5032 (11) Å α = 76.325 (1)° β = 76.654 (1)° γ = 80.334 (1)° V = 918.34 (15) Å3 Z = 1 Mo Kα radiation μ = 1.55 mm−1 T = 296 K 0.30 × 0.30 × 0.25 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.633, T max = 0.672 7254 measured reflections 3572 independent reflections 3300 reflections with I > 2σ(I) R int = 0.073

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.091 S = 1.04 3572 reflections 272 parameters 18 restraints H atoms treated by a mixture of independent and n class="Chemical">constrained refinement Δρmax = 0.67 e Å−3 Δρmin = −0.88 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT-Plus (Bruker, 2003 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809026750/pk2168sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809026750/pk2168Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(H2O)6][Ni(C12H11N2O5)]2·6H2OZ = 1
Mr = 919.00F(000) = 477
Triclinic, P1Dx = 1.662 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.9052 (8) ÅCell parameters from 6194 reflections
b = 10.7595 (10) Åθ = 2.4–28.4°
c = 11.5032 (11) ŵ = 1.55 mm1
α = 76.325 (1)°T = 296 K
β = 76.654 (1)°Block, yellow
γ = 80.334 (1)°0.30 × 0.30 × 0.25 mm
V = 918.34 (15) Å3
Bruker SMART APEX CCD diffractometer3572 independent reflections
Radiation source: sealed tube3300 reflections with I > 2σ(I)
graphiteRint = 0.073
φ and ω scansθmax = 26.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −9→9
Tmin = 0.633, Tmax = 0.672k = −13→13
7254 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.091H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0608P)2 + 0.0666P] where P = (Fo2 + 2Fc2)/3
3572 reflections(Δ/σ)max = 0.002
272 parametersΔρmax = 0.67 e Å3
18 restraintsΔρmin = −0.88 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.53859 (3)0.70463 (2)0.993860 (18)0.02321 (10)
Co10.50001.00000.50000.02262 (11)
C10.7940 (2)0.51644 (17)0.89989 (17)0.0253 (4)
C20.9034 (2)0.46971 (18)0.79967 (18)0.0292 (4)
H20.90180.51640.72070.035*
C31.0127 (2)0.35529 (19)0.81779 (19)0.0302 (4)
C41.0201 (3)0.28302 (19)0.9361 (2)0.0349 (4)
H41.09620.20730.94770.042*
C50.9134 (3)0.32634 (18)1.03332 (19)0.0329 (4)
H50.91680.27801.11150.039*
C60.7977 (2)0.44218 (17)1.01975 (17)0.0273 (4)
C70.6938 (2)0.48078 (18)1.12730 (18)0.0295 (4)
H70.70510.42691.20200.035*
C80.4866 (2)0.6148 (2)1.24644 (17)0.0337 (4)
H8A0.56690.62231.29600.040*
H8B0.41620.54641.29080.040*
C90.3700 (2)0.74026 (19)1.22086 (16)0.0268 (4)
C100.2913 (2)0.90964 (18)1.05217 (17)0.0290 (4)
H10A0.32370.98171.07600.035*
H10B0.16640.90681.08110.035*
C110.3377 (2)0.92460 (18)0.91472 (17)0.0282 (4)
C121.1187 (3)0.3666 (2)0.6024 (2)0.0459 (5)
H12A1.00290.37200.58750.069*
H12B1.20000.31870.54830.069*
H12C1.15110.45180.58840.069*
N10.58553 (19)0.58460 (15)1.12880 (14)0.0268 (3)
N20.3876 (2)0.79006 (16)1.10386 (14)0.0273 (3)
O10.69326 (16)0.62706 (13)0.87706 (12)0.028
O20.45819 (18)0.84079 (13)0.87239 (11)0.0307 (3)
O30.26077 (19)1.01400 (14)0.84986 (12)0.0393 (3)
O40.27210 (18)0.78848 (15)1.30738 (12)0.0342 (3)
O51.12210 (19)0.30305 (15)0.72600 (14)0.0408 (3)
O60.4645 (2)0.83132 (15)0.62941 (13)0.0392 (3)
H6A0.387 (3)0.794 (3)0.618 (2)0.059*
H6B0.457 (4)0.831 (3)0.7041 (17)0.059*
O70.46103 (19)1.10891 (15)0.63028 (12)0.0339 (3)
H7A0.386 (3)1.093 (3)0.6968 (19)0.051*
H7B0.551 (2)1.129 (3)0.645 (2)0.051*
O80.23876 (17)1.02599 (15)0.49286 (13)0.0361 (3)
H8C0.162 (3)1.018 (3)0.5560 (17)0.054*
H8D0.208 (3)1.089 (2)0.4394 (19)0.054*
O90.2328 (2)0.69532 (17)0.57292 (15)0.0458 (4)
H9A0.127 (3)0.722 (3)0.601 (2)0.069*
H9B0.251 (4)0.717 (3)0.4978 (15)0.069*
O100.00613 (19)0.01756 (16)0.71029 (14)0.0415 (4)
H10C−0.067 (3)0.081 (2)0.699 (3)0.062*
H10D0.073 (3)0.029 (3)0.752 (3)0.062*
O110.1080 (2)0.20515 (16)0.31073 (15)0.0446 (4)
H11B0.178 (3)0.248 (3)0.254 (2)0.067*
H11A0.080 (4)0.150 (2)0.280 (3)0.067*
U11U22U33U12U13U23
Ni10.02687 (14)0.02163 (15)0.01832 (14)0.00209 (10)−0.00428 (10)−0.00239 (10)
Co10.02615 (18)0.0238 (2)0.01660 (18)−0.00234 (14)−0.00260 (13)−0.00383 (13)
C10.0255 (8)0.0193 (8)0.0313 (9)−0.0020 (6)−0.0082 (7)−0.0040 (7)
C20.0315 (9)0.0232 (9)0.0317 (10)−0.0001 (7)−0.0080 (7)−0.0042 (7)
C30.0282 (8)0.0240 (9)0.0398 (11)−0.0004 (7)−0.0075 (8)−0.0108 (8)
C40.0354 (9)0.0230 (9)0.0459 (12)0.0035 (7)−0.0143 (9)−0.0048 (8)
C50.0369 (9)0.0228 (10)0.0387 (10)−0.0010 (8)−0.0158 (8)0.0002 (8)
C60.0285 (8)0.0198 (9)0.0336 (10)−0.0019 (7)−0.0106 (7)−0.0019 (7)
C70.0316 (8)0.0253 (9)0.0292 (9)−0.0038 (7)−0.0102 (7)0.0036 (7)
C80.0333 (9)0.0425 (11)0.0222 (9)−0.0015 (8)−0.0066 (7)−0.0020 (8)
C90.0269 (8)0.0333 (10)0.0215 (8)−0.0059 (7)−0.0044 (7)−0.0067 (7)
C100.0351 (9)0.0254 (9)0.0244 (9)0.0011 (7)−0.0031 (7)−0.0067 (7)
C110.0328 (9)0.0238 (9)0.0249 (9)0.0013 (7)−0.0026 (7)−0.0053 (7)
C120.0519 (12)0.0402 (13)0.0409 (12)0.0061 (10)−0.0034 (10)−0.0130 (10)
N10.0278 (7)0.0279 (8)0.0227 (7)−0.0017 (6)−0.0065 (6)−0.0012 (6)
N20.0324 (7)0.0260 (8)0.0220 (7)0.0015 (6)−0.0053 (6)−0.0053 (6)
O10.0310.0230.0240.006−0.004−0.001
O20.0386 (7)0.0272 (7)0.0203 (6)0.0076 (5)−0.0038 (5)−0.0035 (5)
O30.0491 (8)0.0322 (8)0.0258 (7)0.0151 (6)−0.0042 (6)−0.0019 (6)
O40.0367 (7)0.0427 (8)0.0218 (7)−0.0003 (6)−0.0036 (5)−0.0091 (6)
O50.0438 (8)0.0324 (8)0.0418 (8)0.0109 (6)−0.0068 (7)−0.0116 (7)
O60.0556 (9)0.0372 (8)0.0253 (7)−0.0144 (7)−0.0108 (6)0.0014 (6)
O70.0368 (7)0.0401 (8)0.0258 (7)−0.0076 (6)0.0001 (5)−0.0129 (6)
O80.0303 (7)0.0435 (9)0.0288 (7)0.0000 (6)−0.0052 (5)−0.0005 (6)
O90.0518 (9)0.0448 (10)0.0398 (9)−0.0103 (8)−0.0107 (7)−0.0022 (7)
O100.0363 (7)0.0485 (10)0.0365 (8)0.0039 (7)−0.0028 (6)−0.0128 (7)
O110.0486 (9)0.0420 (9)0.0361 (8)−0.0067 (7)−0.0053 (7)0.0037 (7)
Ni1—N21.8318 (15)C8—H8A0.9700
Ni1—N11.8364 (15)C8—H8B0.9700
Ni1—O11.8510 (13)C9—O41.270 (2)
Ni1—O21.9058 (13)C9—N21.310 (2)
Co1—O7i2.0518 (13)C10—N21.451 (2)
Co1—O72.0518 (13)C10—C111.514 (3)
Co1—O82.0551 (13)C10—H10A0.9700
Co1—O8i2.0551 (13)C10—H10B0.9700
Co1—O62.0711 (14)C11—O31.235 (2)
Co1—O6i2.0711 (14)C11—O21.289 (2)
C1—O11.323 (2)C12—O51.429 (3)
C1—C21.413 (3)C12—H12A0.9600
C1—C61.425 (3)C12—H12B0.9600
C2—C31.382 (3)C12—H12C0.9600
C2—H20.9300O6—H6A0.831 (16)
C3—O51.369 (2)O6—H6B0.848 (16)
C3—C41.408 (3)O7—H7A0.854 (16)
C4—C51.363 (3)O7—H7B0.844 (16)
C4—H40.9300O8—H8C0.827 (16)
C5—C61.416 (3)O8—H8D0.844 (16)
C5—H50.9300O9—H9A0.850 (17)
C6—C71.427 (3)O9—H9B0.824 (17)
C7—N11.289 (2)O10—H10C0.822 (16)
C7—H70.9300O10—H10D0.831 (17)
C8—N11.477 (2)O11—H11B0.850 (17)
C8—C91.509 (3)O11—H11A0.841 (17)
N2—Ni1—N185.19 (7)C9—C8—H8A110.0
N2—Ni1—O1176.83 (6)N1—C8—H8B110.0
N1—Ni1—O197.51 (6)C9—C8—H8B110.0
N2—Ni1—O285.41 (6)H8A—C8—H8B108.4
N1—Ni1—O2170.42 (6)O4—C9—N2126.66 (18)
O1—Ni1—O291.94 (5)O4—C9—C8121.02 (16)
O7i—Co1—O7180.000 (1)N2—C9—C8112.30 (16)
O7i—Co1—O887.11 (6)N2—C10—C11107.22 (14)
O7—Co1—O892.89 (6)N2—C10—H10A110.3
O7i—Co1—O8i92.89 (6)C11—C10—H10A110.3
O7—Co1—O8i87.11 (6)N2—C10—H10B110.3
O8—Co1—O8i180.000 (1)C11—C10—H10B110.3
O7i—Co1—O687.25 (6)H10A—C10—H10B108.5
O7—Co1—O692.75 (6)O3—C11—O2123.75 (17)
O8—Co1—O690.07 (6)O3—C11—C10119.65 (16)
O8i—Co1—O689.93 (6)O2—C11—C10116.61 (15)
O7i—Co1—O6i92.75 (6)O5—C12—H12A109.5
O7—Co1—O6i87.25 (6)O5—C12—H12B109.5
O8—Co1—O6i89.93 (6)H12A—C12—H12B109.5
O8i—Co1—O6i90.07 (6)O5—C12—H12C109.5
O6—Co1—O6i180.00 (6)H12A—C12—H12C109.5
O1—C1—C2118.00 (16)H12B—C12—H12C109.5
O1—C1—C6123.54 (17)C7—N1—C8119.95 (16)
C2—C1—C6118.46 (17)C7—N1—Ni1125.62 (13)
C3—C2—C1120.68 (18)C8—N1—Ni1114.43 (12)
C3—C2—H2119.7C9—N2—C10124.56 (16)
C1—C2—H2119.7C9—N2—Ni1119.54 (13)
O5—C3—C2124.42 (18)C10—N2—Ni1115.88 (12)
O5—C3—C4114.44 (17)C1—O1—Ni1125.20 (11)
C2—C3—C4121.15 (18)C11—O2—Ni1114.57 (11)
C5—C4—C3118.64 (18)C3—O5—C12118.60 (16)
C5—C4—H4120.7Co1—O6—H6A111 (2)
C3—C4—H4120.7Co1—O6—H6B120 (2)
C4—C5—C6122.47 (18)H6A—O6—H6B113 (2)
C4—C5—H5118.8Co1—O7—H7A121.4 (18)
C6—C5—H5118.8Co1—O7—H7B117.0 (18)
C5—C6—C1118.58 (17)H7A—O7—H7B109 (2)
C5—C6—C7118.28 (17)Co1—O8—H8C121.2 (18)
C1—C6—C7123.11 (17)Co1—O8—H8D115.3 (19)
N1—C7—C6124.99 (17)H8C—O8—H8D111 (2)
N1—C7—H7117.5H9A—O9—H9B109 (2)
C6—C7—H7117.5H10C—O10—H10D111 (2)
N1—C8—C9108.53 (15)H11B—O11—H11A107 (2)
N1—C8—H8A110.0
D—H···AD—HH···AD···AD—H···A
O6—H6A···O90.83 (2)1.97 (2)2.796 (2)171 (3)
O6—H6B···O20.85 (2)1.96 (2)2.809 (2)175 (3)
O7—H7A···O30.85 (2)1.89 (2)2.721 (2)164 (3)
O7—H7B···O4ii0.84 (2)2.01 (2)2.835 (2)167 (3)
O8—H8C···O10iii0.83 (2)1.91 (2)2.733 (2)170 (3)
O8—H8D···O11iii0.84 (2)1.93 (2)2.756 (2)167 (3)
O9—H9A···O11iv0.85 (2)2.03 (2)2.871 (2)170 (3)
O9—H9B···O4v0.82 (2)2.12 (2)2.941 (2)173 (3)
O10—H10C···O4vi0.82 (2)1.96 (2)2.775 (2)169 (3)
O10—H10D···O3vii0.83 (2)2.03 (2)2.840 (2)167 (3)
O11—H11B···O1viii0.85 (2)1.98 (2)2.817 (2)170 (3)
O11—H11A···O10ix0.84 (2)2.00 (2)2.778 (2)154 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O6—H6A⋯O90.831 (16)1.973 (17)2.796 (2)171 (3)
O6—H6B⋯O20.848 (16)1.964 (16)2.809 (2)175 (3)
O7—H7A⋯O30.854 (16)1.890 (17)2.721 (2)164 (3)
O7—H7B⋯O4i0.844 (16)2.007 (17)2.835 (2)167 (3)
O8—H8C⋯O10ii0.827 (16)1.914 (17)2.733 (2)170 (3)
O8—H8D⋯O11ii0.844 (16)1.927 (17)2.756 (2)167 (3)
O9—H9A⋯O11iii0.850 (17)2.030 (17)2.871 (2)170 (3)
O9—H9B⋯O4iv0.824 (17)2.121 (18)2.941 (2)173 (3)
O10—H10C⋯O4v0.822 (16)1.963 (17)2.775 (2)169 (3)
O10—H10D⋯O3vi0.831 (17)2.025 (17)2.840 (2)167 (3)
O11—H11B⋯O1vii0.850 (17)1.976 (17)2.817 (2)170 (3)
O11—H11A⋯O10viii0.841 (17)1.999 (18)2.778 (2)154 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .

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