Literature DB >> 21583383

Bis[triaqua-(1H-1,2,4-triazole-3,5-dicarboxyl-ato-κO,N)copper(II)] di-μ-aqua-bis-[diaqua-(1H-1,2,4-triazole-3,5-dicarboxyl-ato-κO,N)copper(II)].

Li-Xia Xie1, Xin Li, Pu-Hui Xie, Qiu Jin.   

Abstract

In the title compound, [Cu(C(4)HN(3)O(4))(H(2)O)(3)](2)[Cu(2)(C(4)HN(3)O(4))(2)(H(2)O)(6)], both monomeric and dimeric mol-ecules are present in the solid state. In the monomeric compound, the Cu(II) atom is five-coordinated in a square-pyramidal configuration by one O atom and one N atom from one n class="Chemical">1H-1,2,4-triazole-3,5-dicarboxyl-ate (TZDCA(2-)) ligand and three O atoms from water mol-ecules. In the centrosymmetric binuclear complex, each Cu(II) atom is six-coordinated in an octa-hedral geometry by one O atom and one N atom from one TZDCA(2-) ligand and four O atoms from water mol-ecules, two of which bridge the Cu(II) atoms. In the structure, there are intra-molecular O-H⋯O and N-H⋯O hydrogen bonds, and in the crystal, inter-molecular O-H⋯O, O-H⋯N and N-H⋯O hydrogen bonds link symmetry-related mol-ecules, forming a three-dimensional supra-molecular structure.

Entities:  

Year:  2009        PMID: 21583383      PMCID: PMC2977176          DOI: 10.1107/S1600536809026993

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Billing et al. (1970 ▶); Ouellette et al. (2006a ▶,b ▶, 2007 ▶); Zhai et al. (2007 ▶). For the preparation of 1,2,4,-triazole-3,5-dicarboxylic acid, see: Baitalik et al. (2004 ▶).

Experimental

Crystal data

[Cu(C4HN3O4)(H2O)3]2[n class="Chemical">Cu2(C4HN3O4)2(H2O)6] M = 1090.70 Monoclinic, a = 12.056 (2) Å b = 11.432 (2) Å c = 14.958 (3) Å β = 123.65 (3)° V = 1716.1 (5) Å3 Z = 2 Mo Kα radiation μ = 2.57 mm−1 T = 293 K 0.10 × 0.10 × 0.08 mm

Data collection

Mercury CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2000 ▶) T min = 0.783, T max = 0.821 16043 measured reflections 3020 independent reflections 2866 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.115 S = 1.17 3020 reflections 272 parameters H-atom parameters constrained Δρmax = 0.64 e Å−3 Δρmin = −0.54 e Å−3 Data collection: CrystalClear (Rigaku, 2000 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809026993/su2127sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809026993/su2127Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C4HN3O4)(H2O)3]2[Cu2(C4HN3O4)2(H2O)6]F(000) = 1096
Mr = 1090.70Dx = 2.111 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3290 reflections
a = 12.056 (2) Åθ = 2.0–31.0°
b = 11.432 (2) ŵ = 2.57 mm1
c = 14.958 (3) ÅT = 293 K
β = 123.65 (3)°Prism, blue
V = 1716.1 (5) Å30.10 × 0.10 × 0.08 mm
Z = 2
Mercury CCD diffractometer3020 independent reflections
Radiation source: fine-focus sealed tube2866 reflections with I > 2σ(I)
graphiteRint = 0.051
ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (CrystalClear; Rigaku, 2000)h = −14→14
Tmin = 0.783, Tmax = 0.821k = −13→13
16043 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H-atom parameters constrained
S = 1.17w = 1/[σ2(Fo2) + (0.0397P)2 + 6.4925P] where P = (Fo2 + 2Fc2)/3
3020 reflections(Δ/σ)max < 0.001
272 parametersΔρmax = 0.64 e Å3
0 restraintsΔρmin = −0.54 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu2−0.00361 (5)0.00777 (4)0.38176 (4)0.0204 (2)
O5−0.0608 (3)0.1733 (3)0.3706 (3)0.0251 (10)
O60.0026 (3)0.3562 (3)0.3659 (3)0.0273 (10)
O70.2747 (4)−0.1431 (3)0.3948 (3)0.0386 (13)
O80.4173 (3)−0.0451 (3)0.3711 (3)0.0322 (11)
O12−0.1496 (3)−0.0099 (3)0.1914 (3)0.0299 (10)
O130.0607 (3)−0.1507 (3)0.4033 (3)0.0401 (13)
O14−0.1385 (3)−0.0368 (3)0.4098 (2)0.0229 (9)
N40.2191 (4)0.2525 (3)0.3602 (3)0.0239 (11)
N50.2979 (4)0.1643 (3)0.3662 (3)0.0224 (11)
N60.1440 (3)0.0784 (3)0.3743 (3)0.0179 (10)
C50.1271 (4)0.1964 (4)0.3656 (3)0.0194 (12)
C60.0143 (4)0.2496 (4)0.3669 (3)0.0195 (12)
C70.2535 (4)0.0614 (4)0.3741 (3)0.0190 (12)
C80.3216 (4)−0.0531 (4)0.3805 (4)0.0234 (12)
Cu10.51531 (5)0.10043 (5)0.13087 (5)0.0233 (2)
O10.5666 (3)−0.0657 (3)0.1367 (3)0.0280 (10)
O20.4995 (3)−0.2483 (3)0.1359 (3)0.0271 (10)
O30.2329 (3)0.2532 (3)0.1120 (3)0.0302 (10)
O40.0728 (3)0.1515 (3)0.1110 (3)0.0310 (10)
O90.6516 (3)0.1440 (3)0.1069 (3)0.0302 (10)
O100.6585 (3)0.1163 (3)0.3205 (3)0.0316 (10)
O110.4531 (3)0.2599 (3)0.1113 (3)0.0351 (10)
N10.2712 (4)−0.1437 (3)0.1204 (3)0.0253 (11)
N20.1924 (3)−0.0561 (3)0.1154 (3)0.0229 (11)
N30.3567 (3)0.0310 (3)0.1222 (3)0.0210 (11)
C10.3685 (4)−0.0882 (4)0.1249 (4)0.0217 (12)
C20.4882 (4)−0.1371 (4)0.1318 (3)0.0215 (11)
C30.2427 (4)0.0478 (4)0.1159 (3)0.0199 (12)
C40.1757 (4)0.1610 (4)0.1129 (4)0.0212 (12)
H50.367100.164200.364100.0270*
H12A−0.09350−0.012300.175800.0450*
H12B−0.19850−0.063400.187800.0450*
H13A0.01660−0.213900.387000.0600*
H13B0.12470−0.146500.394700.0600*
H14A−0.21270−0.001100.377200.0340*
H14B−0.16800−0.106500.395900.0340*
H20.12460−0.082600.112400.0280*
H9A0.618800.143700.039900.0460*
H9B0.680100.212100.132000.0460*
H10A0.607500.133400.341200.0480*
H10B0.703200.179100.335500.0480*
H11A0.500600.321400.132700.0530*
H11B0.382300.269300.110000.0530*
U11U22U33U12U13U23
Cu20.0215 (3)0.0096 (3)0.0376 (3)0.0003 (2)0.0211 (3)0.0019 (2)
O50.0252 (16)0.0143 (15)0.047 (2)−0.0007 (12)0.0270 (15)0.0022 (13)
O60.0313 (17)0.0137 (16)0.049 (2)0.0024 (13)0.0298 (17)0.0010 (14)
O70.040 (2)0.0133 (16)0.082 (3)0.0048 (15)0.046 (2)0.0052 (17)
O80.0322 (18)0.0224 (17)0.059 (2)0.0065 (14)0.0359 (18)0.0019 (16)
O120.0283 (17)0.0197 (16)0.046 (2)−0.0011 (13)0.0232 (16)−0.0058 (14)
O130.038 (2)0.0178 (17)0.084 (3)0.0009 (15)0.046 (2)0.0049 (17)
O140.0207 (15)0.0112 (14)0.0397 (18)−0.0004 (12)0.0185 (14)0.0021 (13)
N40.0247 (19)0.0134 (18)0.042 (2)0.0041 (15)0.0237 (18)0.0021 (16)
N50.0193 (17)0.0155 (18)0.041 (2)0.0007 (14)0.0221 (17)−0.0007 (16)
N60.0217 (18)0.0070 (16)0.0291 (19)0.0020 (13)0.0166 (16)0.0015 (14)
C50.021 (2)0.013 (2)0.030 (2)−0.0005 (16)0.0177 (19)−0.0002 (17)
C60.022 (2)0.012 (2)0.028 (2)−0.0005 (17)0.0161 (19)−0.0009 (17)
C70.021 (2)0.013 (2)0.025 (2)0.0027 (17)0.0140 (18)0.0022 (16)
C80.026 (2)0.015 (2)0.031 (2)0.0035 (18)0.017 (2)−0.0009 (18)
Cu10.0210 (3)0.0137 (3)0.0399 (4)−0.0015 (2)0.0198 (3)0.0011 (2)
O10.0277 (17)0.0152 (16)0.052 (2)0.0029 (13)0.0290 (16)−0.0010 (14)
O20.0264 (16)0.0140 (16)0.052 (2)0.0028 (13)0.0287 (16)0.0021 (14)
O30.0283 (17)0.0115 (15)0.056 (2)0.0022 (13)0.0267 (17)0.0002 (14)
O40.0278 (17)0.0203 (17)0.052 (2)0.0039 (13)0.0266 (17)0.0024 (15)
O90.0302 (17)0.0166 (16)0.053 (2)−0.0025 (13)0.0289 (17)0.0021 (15)
O100.0275 (17)0.0252 (17)0.045 (2)0.0013 (14)0.0219 (16)−0.0071 (15)
O110.0296 (17)0.0144 (16)0.069 (2)−0.0006 (13)0.0321 (18)0.0027 (16)
N10.0240 (19)0.0114 (18)0.047 (2)−0.0011 (14)0.0237 (19)−0.0015 (16)
N20.0178 (18)0.0157 (19)0.039 (2)0.0003 (14)0.0182 (17)0.0012 (16)
N30.0189 (17)0.0170 (18)0.032 (2)0.0016 (14)0.0172 (16)0.0017 (15)
C10.023 (2)0.013 (2)0.032 (2)0.0018 (17)0.017 (2)0.0003 (17)
C20.0107 (19)0.026 (2)0.024 (2)0.0070 (17)0.0072 (18)−0.0032 (18)
C30.022 (2)0.013 (2)0.026 (2)−0.0004 (17)0.0142 (19)0.0021 (17)
C40.017 (2)0.018 (2)0.030 (2)0.0040 (17)0.0139 (19)0.0020 (18)
Cu2—O51.989 (4)O4—C41.230 (7)
Cu2—O122.386 (4)O9—H9A0.8500
Cu2—O131.926 (4)O9—H9B0.8500
Cu2—O141.959 (4)O10—H10B0.8500
Cu2—N62.013 (4)O10—H10A0.8500
Cu2—O14i2.617 (3)O11—H11A0.8500
Cu1—N32.007 (4)O11—H11B0.8500
Cu1—O91.931 (4)N4—N51.354 (6)
Cu1—O102.373 (4)N4—C51.322 (7)
Cu1—O11.984 (4)N5—C71.325 (6)
Cu1—O111.931 (4)N6—C71.336 (7)
O5—C61.280 (6)N6—C51.360 (6)
O6—C61.226 (6)N5—H50.8500
O7—C81.248 (6)N1—N21.354 (6)
O8—C81.241 (7)N1—C11.302 (8)
O12—H12B0.8300N2—C31.332 (6)
O12—H12A0.8300N3—C11.368 (6)
O13—H13A0.8500N3—C31.338 (7)
O13—H13B0.8500N2—H20.8500
O14—H14A0.8500C5—C61.500 (7)
O14—H14B0.8500C7—C81.520 (7)
O1—C21.220 (6)C1—C21.497 (8)
O2—C21.276 (6)C3—C41.513 (7)
O3—C41.264 (6)
O5—Cu2—O1289.33 (14)Cu1—O10—H10B108.00
O5—Cu2—O13175.94 (16)Cu1—O10—H10A105.00
O5—Cu2—O1488.58 (17)Cu1—O11—H11B115.00
O5—Cu2—N683.67 (16)H11A—O11—H11B111.00
O5—Cu2—O14i86.96 (14)Cu1—O11—H11A127.00
O12—Cu2—O1394.73 (14)N5—N4—C5102.5 (4)
O12—Cu2—O1494.74 (13)N4—N5—C7111.3 (5)
O12—Cu2—N693.33 (15)Cu2—N6—C7147.9 (3)
O12—Cu2—O14i174.72 (14)Cu2—N6—C5108.3 (3)
O13—Cu2—O1491.41 (17)C5—N6—C7103.9 (4)
O13—Cu2—N695.76 (17)N4—N5—H5132.00
O13—Cu2—O14i89.02 (14)C7—N5—H5117.00
O14—Cu2—N6168.74 (14)N2—N1—C1103.1 (4)
O14—Cu2—O14i81.43 (12)N1—N2—C3110.9 (4)
O14i—Cu2—N690.00 (14)Cu1—N3—C1108.2 (3)
O9—Cu1—N3165.50 (16)Cu1—N3—C3148.5 (3)
O1—Cu1—O988.77 (17)C1—N3—C3103.4 (4)
O1—Cu1—O1091.04 (14)C3—N2—H2138.00
O1—Cu1—O11174.72 (16)N1—N2—H2111.00
O1—Cu1—N383.50 (17)N4—C5—N6113.6 (5)
O9—Cu1—O1094.13 (16)N6—C5—C6119.3 (4)
O9—Cu1—O1191.57 (17)N4—C5—C6127.0 (4)
O11—Cu1—N395.02 (17)O5—C6—O6126.8 (5)
O10—Cu1—O1194.20 (14)O5—C6—C5113.1 (4)
O10—Cu1—N398.25 (15)O6—C6—C5120.1 (5)
Cu2—O5—C6115.6 (4)N5—C7—N6108.6 (4)
Cu2—O14—Cu2i98.57 (13)N6—C7—C8128.7 (4)
Cu2—O12—H12A99.00N5—C7—C8122.7 (5)
Cu2—O12—H12B100.00O8—C8—C7115.7 (4)
H12A—O12—H12B128.00O7—C8—O8128.2 (5)
Cu2—O13—H13A129.00O7—C8—C7116.1 (5)
Cu2—O13—H13B104.00N1—C1—N3114.1 (5)
H13A—O13—H13B119.00N1—C1—C2128.9 (4)
Cu2—O14—H14B118.00N3—C1—C2117.0 (5)
H14A—O14—H14B98.00O1—C2—O2127.2 (5)
Cu2i—O14—H14A114.00O1—C2—C1116.1 (4)
Cu2—O14—H14A119.00O2—C2—C1116.6 (5)
Cu2i—O14—H14B109.00N3—C3—C4129.5 (4)
Cu1—O1—C2115.2 (4)N2—C3—N3108.6 (4)
Cu1—O9—H9B109.00N2—C3—C4121.9 (5)
H9A—O9—H9B110.00O3—C4—C3115.4 (5)
Cu1—O9—H9A109.00O4—C4—C3116.1 (4)
H10A—O10—H10B101.00O3—C4—O4128.5 (5)
O12—Cu2—O5—C6−95.3 (3)C5—N6—C7—C8−179.2 (4)
O14—Cu2—O5—C6170.0 (3)Cu2—N6—C5—N4179.9 (3)
N6—Cu2—O5—C6−1.9 (3)C7—N6—C5—N4−0.1 (5)
O14i—Cu2—O5—C688.5 (3)C5—N6—C7—N50.3 (4)
O5—Cu2—O14—Cu2i−87.14 (15)Cu2—N6—C5—C62.0 (4)
O12—Cu2—O14—Cu2i−176.35 (12)Cu2—N6—C7—C80.9 (8)
O13—Cu2—O14—Cu2i88.80 (15)Cu2—N6—C7—N5−179.7 (4)
O14i—Cu2—O14—Cu2i−0.02 (13)C7—N6—C5—C6−178.0 (3)
O5—Cu2—N6—C5−0.2 (3)C1—N1—N2—C30.6 (5)
O5—Cu2—N6—C7179.7 (6)N2—N1—C1—N3−0.5 (5)
O12—Cu2—N6—C588.8 (3)N2—N1—C1—C2179.9 (5)
O12—Cu2—N6—C7−91.3 (6)N1—N2—C3—N3−0.5 (5)
O13—Cu2—N6—C5−176.2 (3)N1—N2—C3—C4−178.9 (4)
O13—Cu2—N6—C73.8 (6)C3—N3—C1—C2179.9 (4)
O14i—Cu2—N6—C5−87.1 (3)C3—N3—C1—N10.2 (5)
O14i—Cu2—N6—C792.8 (6)Cu1—N3—C1—N1179.6 (3)
O5—Cu2—O14i—Cu2i89.02 (17)C1—N3—C3—C4178.4 (4)
O13—Cu2—O14i—Cu2i−91.57 (18)Cu1—N3—C3—C4−0.5 (9)
O14—Cu2—O14i—Cu2i0.02 (16)Cu1—N3—C1—C2−0.7 (5)
N6—Cu2—O14i—Cu2i172.68 (16)Cu1—N3—C3—N2−178.7 (4)
O11—Cu1—N3—C3−6.2 (6)C1—N3—C3—N20.2 (4)
O9—Cu1—O1—C2−166.9 (3)N6—C5—C6—O6175.4 (4)
O10—Cu1—O1—C299.0 (3)N4—C5—C6—O6−2.2 (6)
N3—Cu1—O1—C20.8 (3)N6—C5—C6—O5−3.6 (5)
O1—Cu1—N3—C10.0 (3)N4—C5—C6—O5178.8 (4)
O1—Cu1—N3—C3178.9 (6)N6—C7—C8—O7−5.1 (7)
O10—Cu1—N3—C1−90.1 (3)N6—C7—C8—O8175.1 (4)
O10—Cu1—N3—C388.8 (6)N5—C7—C8—O8−4.3 (6)
O11—Cu1—N3—C1174.9 (3)N5—C7—C8—O7175.5 (4)
Cu2—O5—C6—O6−175.7 (4)N1—C1—C2—O1−178.9 (5)
Cu2—O5—C6—C53.3 (4)N3—C1—C2—O11.5 (6)
Cu1—O1—C2—C1−1.4 (5)N3—C1—C2—O2179.0 (4)
Cu1—O1—C2—O2−178.6 (3)N1—C1—C2—O2−1.4 (7)
C5—N4—N5—C70.4 (4)N2—C3—C4—O3−178.9 (4)
N5—N4—C5—C6177.5 (4)N2—C3—C4—O40.7 (6)
N5—N4—C5—N6−0.2 (5)N3—C3—C4—O33.1 (7)
N4—N5—C7—N6−0.4 (5)N3—C3—C4—O4−177.4 (4)
N4—N5—C7—C8179.1 (4)
D—H···AD—HH···AD···AD—H···A
N2—H2···O6ii0.851.872.709 (6)169
N5—H5···O80.852.462.773 (5)103
N5—H5···O2iii0.851.892.655 (7)148
O9—H9A···O1iv0.852.503.221 (5)144
O9—H9A···O2iv0.852.493.256 (5)150
O9—H9B···O7iii0.851.852.596 (5)145
O10—H10A···O2iii0.852.022.798 (6)151
O10—H10B···O5v0.852.593.103 (6)120
O10—H10B···N1iii0.852.102.863 (5)149
O11—H11A···O8iii0.851.842.650 (5)160
O11—H11B···O30.851.832.662 (6)167
O12—H12A···O6ii0.832.152.811 (6)137
O12—H12B···O1vi0.832.493.111 (6)132
O12—H12B···N4ii0.832.192.821 (5)133
O13—H13A···O4ii0.851.892.714 (5)164
O13—H13B···O70.851.812.654 (7)172
O14—H14A···O10vi0.851.862.686 (5)163
O14—H14B···O3ii0.851.762.599 (5)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O6i0.851.872.709 (6)169
N5—H5⋯O80.852.462.773 (5)103
N5—H5⋯O2ii0.851.892.655 (7)148
O9—H9A⋯O1iii0.852.503.221 (5)144
O9—H9A⋯O2iii0.852.493.256 (5)150
O9—H9B⋯O7ii0.851.852.596 (5)145
O10—H10A⋯O2ii0.852.022.798 (6)151
O10—H10B⋯O5iv0.852.593.103 (6)120
O10—H10B⋯N1ii0.852.102.863 (5)149
O11—H11A⋯O8ii0.851.842.650 (5)160
O11—H11B⋯O30.851.832.662 (6)167
O12—H12A⋯O6i0.832.152.811 (6)137
O12—H12B⋯O1v0.832.493.111 (6)132
O12—H12B⋯N4i0.832.192.821 (5)133
O13—H13A⋯O4i0.851.892.714 (5)164
O13—H13B⋯O70.851.812.654 (7)172
O14—H14A⋯O10v0.851.862.686 (5)163
O14—H14B⋯O3i0.851.762.599 (5)169

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Solid-state coordination chemistry of the Cu/triazolate/X system (X = F-, Cl-, Br-, I-, OH-, and SO4(2-)).

Authors:  Wayne Ouellette; Andrey V Prosvirin; Vincent Chieffo; Kim R Dunbar; Bruce Hudson; Jon Zubieta
Journal:  Inorg Chem       Date:  2006-11-13       Impact factor: 5.165

3.  Hydrothermal and structural chemistry of the zinc(II)- and cadmium(II)-1,2,4-triazolate systems.

Authors:  Wayne Ouellette; Bruce S Hudson; Jon Zubieta
Journal:  Inorg Chem       Date:  2007-05-12       Impact factor: 5.165

4.  Hydrothermal synthesis and structure of a three-dimensional cobalt(II) triazolate magnet.

Authors:  Wayne Ouellette; José R Galan-Mascarós; Kim R Dunbar; Jon Zubieta
Journal:  Inorg Chem       Date:  2006-03-06       Impact factor: 5.165

  4 in total

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