| Literature DB >> 21583307 |
Hui-Dong Xie, Li Jin, Cheng-Zhi Xie.
Abstract
In the title complex, [Co(C(5)H(3)N(2)O(4))(2)(H(2)O)(2)]·2H(2)O, the Co(II) ion lies on an inversion center and is coordinated in a distorted octa-hedral environment. In the crystal structure, complex and water mol-ecules are linked into a three-dimensional network by O-H⋯O and N-H⋯O hydrogen bonds.Entities:
Year: 2009 PMID: 21583307 PMCID: PMC2977339 DOI: 10.1107/S1600536809029456
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C5H3N2O4)2(H2O)2]·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2747 reflections |
| θ = 2.7–27.9° | |
| µ = 1.14 mm−1 | |
| β = 108.641 (4)° | Block, orange |
| 0.32 × 0.27 × 0.14 mm | |
| Bruker SMART CCD diffractometer | 1502 independent reflections |
| Radiation source: fine-focus sealed tube | 1331 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.5°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 5748 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1502 reflections | (Δ/σ)max < 0.001 |
| 129 parameters | Δρmax = 0.84 e Å−3 |
| 0 restraints | Δρmin = −0.44 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.5000 | 1.0000 | 0.0000 | 0.0227 (3) | |
| O1 | 0.5183 (3) | 0.8358 (2) | −0.0667 (5) | 0.0308 (6) | |
| O2 | 0.6657 (3) | 0.6977 (2) | −0.0142 (5) | 0.0337 (7) | |
| O3 | 1.1998 (3) | 0.9569 (3) | 0.3134 (5) | 0.0408 (8) | |
| O4 | 1.0960 (3) | 1.1105 (2) | 0.3529 (5) | 0.0366 (7) | |
| H4 | 1.1772 | 1.1324 | 0.3977 | 0.055* | |
| O5 | 0.4797 (3) | 0.9554 (3) | 0.2803 (5) | 0.0378 (7) | |
| H1W | 0.4031 | 0.9594 | 0.3020 | 0.045* | |
| H2W | 0.5296 | 0.9069 | 0.3484 | 0.045* | |
| O6 | 0.7621 (4) | 0.2301 (3) | 0.2670 (8) | 0.0684 (13) | |
| H3W | 0.7617 | 0.2926 | 0.3116 | 0.082* | |
| N1 | 0.7187 (3) | 0.9727 (3) | 0.1137 (5) | 0.0238 (7) | |
| N2 | 0.8371 (3) | 1.0290 (2) | 0.1925 (5) | 0.0237 (7) | |
| H2 | 0.8402 | 1.0958 | 0.2251 | 0.028* | |
| C1 | 0.6402 (4) | 0.7957 (3) | −0.0049 (6) | 0.0239 (8) | |
| C2 | 0.7586 (4) | 0.8723 (3) | 0.0850 (6) | 0.0232 (7) | |
| C3 | 0.9054 (4) | 0.8646 (3) | 0.1462 (6) | 0.0255 (8) | |
| H3 | 0.9595 | 0.8047 | 0.1422 | 0.031* | |
| C4 | 0.9519 (4) | 0.9668 (3) | 0.2143 (6) | 0.0246 (8) | |
| C5 | 1.0964 (4) | 1.0103 (3) | 0.2981 (6) | 0.0264 (8) | |
| H4W | 0.678 (12) | 0.232 (9) | 0.182 (18) | 0.19 (4)* |
| Co1 | 0.0135 (4) | 0.0169 (4) | 0.0356 (4) | 0.0024 (2) | 0.0049 (3) | 0.0001 (3) |
| O1 | 0.0156 (13) | 0.0203 (13) | 0.0522 (17) | 0.0011 (10) | 0.0046 (11) | −0.0035 (12) |
| O2 | 0.0203 (14) | 0.0210 (14) | 0.0535 (18) | 0.0006 (10) | 0.0031 (12) | −0.0062 (12) |
| O3 | 0.0198 (15) | 0.0342 (16) | 0.066 (2) | 0.0006 (12) | 0.0106 (14) | −0.0041 (15) |
| O4 | 0.0207 (14) | 0.0269 (15) | 0.0568 (19) | −0.0042 (11) | 0.0048 (13) | −0.0063 (13) |
| O5 | 0.0292 (16) | 0.0418 (17) | 0.0443 (16) | 0.0129 (13) | 0.0143 (13) | 0.0130 (14) |
| O6 | 0.041 (2) | 0.0318 (19) | 0.124 (4) | 0.0026 (15) | 0.014 (2) | −0.010 (2) |
| N1 | 0.0136 (15) | 0.0210 (15) | 0.0344 (17) | 0.0010 (12) | 0.0041 (12) | −0.0024 (12) |
| N2 | 0.0159 (15) | 0.0154 (14) | 0.0379 (17) | −0.0022 (12) | 0.0059 (13) | −0.0025 (13) |
| C1 | 0.0170 (17) | 0.0197 (18) | 0.0327 (19) | −0.0005 (14) | 0.0047 (15) | −0.0014 (14) |
| C2 | 0.0167 (17) | 0.0185 (17) | 0.0329 (19) | −0.0012 (14) | 0.0056 (15) | −0.0014 (14) |
| C3 | 0.0171 (17) | 0.0183 (18) | 0.039 (2) | 0.0018 (13) | 0.0066 (15) | −0.0005 (15) |
| C4 | 0.0154 (17) | 0.0236 (18) | 0.0336 (19) | 0.0010 (14) | 0.0064 (14) | 0.0008 (15) |
| C5 | 0.0205 (19) | 0.0238 (19) | 0.033 (2) | −0.0021 (14) | 0.0065 (16) | 0.0010 (15) |
| Co1—O5i | 2.065 (3) | O5—H2W | 0.8277 |
| Co1—O5 | 2.065 (3) | O6—H3W | 0.8380 |
| Co1—N1 | 2.108 (3) | O6—H4W | 0.85 (11) |
| Co1—N1i | 2.108 (3) | N1—N2 | 1.336 (4) |
| Co1—O1i | 2.120 (3) | N1—C2 | 1.349 (5) |
| Co1—O1 | 2.120 (3) | N2—C4 | 1.358 (5) |
| O1—C1 | 1.262 (5) | N2—H2 | 0.8600 |
| O2—C1 | 1.256 (5) | C1—C2 | 1.495 (5) |
| O3—C5 | 1.209 (5) | C2—C3 | 1.400 (5) |
| O4—C5 | 1.306 (5) | C3—C4 | 1.386 (5) |
| O4—H4 | 0.8200 | C3—H3 | 0.9300 |
| O5—H1W | 0.8288 | C4—C5 | 1.481 (5) |
| O5i—Co1—O5 | 180 | N2—N1—C2 | 106.3 (3) |
| O5i—Co1—N1 | 89.16 (12) | N2—N1—Co1 | 138.6 (3) |
| O5—Co1—N1 | 90.84 (12) | C2—N1—Co1 | 114.8 (2) |
| O5i—Co1—N1i | 90.84 (12) | N1—N2—C4 | 110.9 (3) |
| O5—Co1—N1i | 89.16 (12) | N1—N2—H2 | 124.6 |
| N1—Co1—N1i | 180 | C4—N2—H2 | 124.6 |
| O5i—Co1—O1i | 88.82 (12) | O2—C1—O1 | 124.1 (3) |
| O5—Co1—O1i | 91.18 (12) | O2—C1—C2 | 119.7 (3) |
| N1—Co1—O1i | 103.22 (11) | O1—C1—C2 | 116.2 (3) |
| N1i—Co1—O1i | 76.78 (11) | N1—C2—C3 | 110.7 (3) |
| O5i—Co1—O1 | 91.18 (12) | N1—C2—C1 | 114.8 (3) |
| O5—Co1—O1 | 88.82 (12) | C3—C2—C1 | 134.5 (3) |
| N1—Co1—O1 | 76.78 (11) | C4—C3—C2 | 104.3 (3) |
| N1i—Co1—O1 | 103.22 (11) | C4—C3—H3 | 127.9 |
| O1i—Co1—O1 | 180 | C2—C3—H3 | 127.9 |
| C1—O1—Co1 | 116.9 (2) | N2—C4—C3 | 107.9 (3) |
| C5—O4—H4 | 109.5 | N2—C4—C5 | 121.6 (3) |
| Co1—O5—H1W | 121.4 | C3—C4—C5 | 130.6 (3) |
| Co1—O5—H2W | 119.8 | O3—C5—O4 | 125.8 (4) |
| H1W—O5—H2W | 111.9 | O3—C5—C4 | 122.5 (3) |
| H3W—O6—H4W | 95.7 | O4—C5—C4 | 111.7 (3) |
| O5i—Co1—O1—C1 | 92.3 (3) | Co1—N1—C2—C3 | 174.1 (3) |
| O5—Co1—O1—C1 | −87.7 (3) | N2—N1—C2—C1 | −179.5 (3) |
| N1—Co1—O1—C1 | 3.4 (3) | Co1—N1—C2—C1 | −5.3 (4) |
| N1i—Co1—O1—C1 | −176.6 (3) | O2—C1—C2—N1 | −171.3 (4) |
| O5i—Co1—N1—N2 | 81.6 (4) | O1—C1—C2—N1 | 8.3 (5) |
| O5—Co1—N1—N2 | −98.4 (4) | O2—C1—C2—C3 | 9.5 (7) |
| O1i—Co1—N1—N2 | −6.9 (4) | O1—C1—C2—C3 | −170.8 (4) |
| O1—Co1—N1—N2 | 173.1 (4) | N1—C2—C3—C4 | 0.1 (4) |
| O5i—Co1—N1—C2 | −90.0 (3) | C1—C2—C3—C4 | 179.3 (4) |
| O5—Co1—N1—C2 | 90.0 (3) | N1—N2—C4—C3 | −0.1 (4) |
| O1i—Co1—N1—C2 | −178.6 (3) | N1—N2—C4—C5 | 179.8 (3) |
| O1—Co1—N1—C2 | 1.4 (3) | C2—C3—C4—N2 | 0.0 (4) |
| C2—N1—N2—C4 | 0.2 (4) | C2—C3—C4—C5 | −179.9 (4) |
| Co1—N1—N2—C4 | −171.9 (3) | N2—C4—C5—O3 | −178.0 (4) |
| Co1—O1—C1—O2 | 172.5 (3) | C3—C4—C5—O3 | 1.9 (7) |
| Co1—O1—C1—C2 | −7.2 (4) | N2—C4—C5—O4 | 2.7 (5) |
| N2—N1—C2—C3 | −0.2 (4) | C3—C4—C5—O4 | −177.4 (4) |
| H··· | ||||
| O4—H4···O2ii | 0.82 | 1.73 | 2.535 (4) | 169 |
| O5—H1W···O3iii | 0.83 | 2.07 | 2.887 (4) | 171 |
| O5—H2W···O2iv | 0.83 | 1.91 | 2.726 (4) | 171 |
| O6—H4W···O1v | 0.85 (11) | 2.06 (11) | 2.828 (5) | 149 (10) |
| O6—H3W···O3vi | 0.84 | 2.30 | 2.932 (5) | 132 |
| N2—H2···O6vii | 0.86 | 1.91 | 2.714 (5) | 155 |
| Co1—O5 | 2.065 (3) |
| Co1—N1 | 2.108 (3) |
| Co1—O1 | 2.120 (3) |
| O1—C1 | 1.262 (5) |
| O2—C1 | 1.256 (5) |
| O5i—Co1—O5 | 180 |
| O5—Co1—N1 | 90.84 (12) |
| O5—Co1—N1i | 89.16 (12) |
| N1—Co1—N1i | 180 |
| O5—Co1—O1i | 91.18 (12) |
| N1—Co1—O1i | 103.22 (11) |
| O5—Co1—O1 | 88.82 (12) |
| N1—Co1—O1 | 76.78 (11) |
| O1i—Co1—O1 | 180 |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O4—H4⋯O2ii | 0.82 | 1.73 | 2.535 (4) | 169 |
| O5—H1 | 0.83 | 2.07 | 2.887 (4) | 171 |
| O5—H2 | 0.83 | 1.91 | 2.726 (4) | 171 |
| O6—H4 | 0.85 (11) | 2.06 (11) | 2.828 (5) | 149 (10) |
| O6—H3 | 0.84 | 2.30 | 2.932 (5) | 132 |
| N2—H2⋯O6vii | 0.86 | 1.91 | 2.714 (5) | 155 |
Symmetry codes: (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .