| Literature DB >> 21583297 |
Wenxiang Chai, Li Song, Hongsheng Shi, Laishun Qin, Kangying Shu.
Abstract
During our research into novel nonlinear optical materials using 1,10-phenanthroline as an appending ligand on lanthanide iodates, crystals of an infinite layered Dy(III) iodate compound, Dy(IO(3))(3)(H(2)O)·H(2)O, were obtained under hydro-thermal conditions. The Dy(III) cation has a dicapped trigonal prismatic coordination environment consisting of one water O atom and seven other O atoms from seven iodate anions. These iodate anions bridge the Dy(III) cations into a two-dimensional structure. Through O-H⋯O hydrogen bonds, all of these layers stack along [111], giving a supra-molecular channel, with the solvent water mol-ecules filling the voids.Entities:
Year: 2009 PMID: 21583297 PMCID: PMC2977138 DOI: 10.1107/S1600536809027068
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| Dy(IO3)3H2O·H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1561 reflections | |
| θ = 2.0–27.5° | |
| µ = 16.65 mm−1 | |
| α = 95.161 (12)° | |
| β = 104.858 (7)° | Block, colourless |
| γ = 110.081 (8)° | 0.16 × 0.12 × 0.06 mm |
| Rigaku R-AXIS RAPID diffractometer | 2260 independent reflections |
| Radiation source: fine-focus sealed tube | 2067 reflections with |
| graphite | |
| Detector resolution: 14.6306 pixels mm-1 | θmax = 27.5°, θmin = 3.2° |
| CCD profile fitting scans | |
| Absorption correction: multi-scan ( | |
| 3819 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2260 reflections | Δρmax = 2.79 e Å−3 |
| 141 parameters | Δρmin = −3.20 e Å−3 |
| 2 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0126 (8) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Dy1 | 0.11491 (7) | −0.58338 (7) | −0.21096 (4) | 0.01105 (18) | |
| I1 | 0.30890 (8) | −0.14149 (8) | 0.07303 (5) | 0.00659 (18) | |
| I2 | 0.28110 (8) | −0.63445 (8) | 0.16834 (5) | 0.00652 (18) | |
| I3 | 0.27848 (9) | −0.26870 (9) | −0.45631 (6) | 0.00862 (19) | |
| O1 | 0.1496 (11) | −0.2711 (12) | −0.0929 (7) | 0.0178 (15) | |
| O2 | 0.0966 (11) | −0.1450 (11) | 0.1365 (7) | 0.0144 (14) | |
| O3 | 0.3778 (11) | 0.1033 (10) | 0.0380 (7) | 0.0134 (14) | |
| O4 | 0.2940 (11) | −0.5350 (11) | 0.0209 (7) | 0.0155 (15) | |
| O5 | 0.2291 (10) | −0.4405 (11) | 0.2502 (7) | 0.0131 (14) | |
| O6 | 0.5556 (10) | −0.5510 (11) | 0.2555 (7) | 0.0121 (14) | |
| O7 | 0.0908 (11) | −0.3710 (11) | −0.3699 (7) | 0.0130 (14) | |
| O8 | 0.1065 (11) | −0.1986 (11) | −0.5813 (7) | 0.0125 (14) | |
| O9 | 0.4335 (11) | −0.0352 (12) | −0.3515 (8) | 0.0187 (16) | |
| O10 | 0.2235 (12) | −0.8611 (12) | −0.2319 (8) | 0.0185 (16) | |
| H10A | 0.198 (15) | −0.928 (9) | −0.179 (7) | 0.028* | |
| H10B | 0.346 (4) | −0.8277 (13) | −0.221 (10) | 0.028* | |
| O11 | 0.2419 (13) | −0.7837 (13) | 0.3943 (9) | 0.0257 (18) | |
| H11A | 0.225 (3) | −0.897 (15) | 0.3811 (19) | 0.039* | |
| H11B | 0.144 (13) | −0.7725 (18) | 0.412 (2) | 0.039* |
| Dy1 | 0.0094 (3) | 0.0136 (3) | 0.0131 (3) | 0.00658 (19) | 0.00455 (18) | 0.00444 (19) |
| I1 | 0.0048 (3) | 0.0061 (3) | 0.0105 (3) | 0.0031 (2) | 0.0028 (2) | 0.0041 (2) |
| I2 | 0.0040 (3) | 0.0067 (3) | 0.0111 (3) | 0.0040 (2) | 0.0027 (2) | 0.0039 (2) |
| I3 | 0.0076 (3) | 0.0109 (3) | 0.0101 (3) | 0.0063 (2) | 0.0032 (2) | 0.0026 (2) |
| O1 | 0.014 (3) | 0.023 (4) | 0.012 (3) | 0.010 (3) | −0.004 (3) | −0.002 (3) |
| O2 | 0.011 (3) | 0.014 (4) | 0.022 (4) | 0.006 (3) | 0.009 (3) | 0.007 (3) |
| O3 | 0.020 (3) | 0.006 (3) | 0.020 (4) | 0.007 (3) | 0.011 (3) | 0.006 (3) |
| O4 | 0.019 (4) | 0.013 (4) | 0.014 (3) | 0.006 (3) | 0.005 (3) | 0.006 (3) |
| O5 | 0.006 (3) | 0.014 (4) | 0.021 (4) | 0.005 (3) | 0.007 (3) | 0.002 (3) |
| O6 | 0.001 (3) | 0.016 (4) | 0.018 (3) | 0.002 (3) | 0.003 (3) | 0.007 (3) |
| O7 | 0.014 (3) | 0.020 (4) | 0.013 (3) | 0.012 (3) | 0.007 (3) | 0.013 (3) |
| O8 | 0.014 (3) | 0.013 (4) | 0.013 (3) | 0.005 (3) | 0.007 (3) | 0.006 (3) |
| O9 | 0.011 (3) | 0.018 (4) | 0.022 (4) | 0.005 (3) | 0.000 (3) | −0.002 (3) |
| O10 | 0.022 (4) | 0.023 (4) | 0.025 (4) | 0.019 (3) | 0.013 (3) | 0.011 (3) |
| O11 | 0.022 (4) | 0.022 (4) | 0.034 (5) | 0.007 (4) | 0.012 (4) | 0.005 (4) |
| Dy1—O4 | 2.401 (7) | I2—O6 | 1.798 (6) |
| Dy1—O2i | 2.408 (7) | I2—O4 | 1.804 (7) |
| Dy1—O8ii | 2.412 (7) | I2—O5 | 1.812 (7) |
| Dy1—O6iii | 2.415 (6) | I3—O9 | 1.783 (8) |
| Dy1—O7 | 2.429 (6) | I3—O8 | 1.812 (7) |
| Dy1—O1 | 2.438 (8) | I3—O7 | 1.813 (7) |
| Dy1—O10 | 2.453 (7) | O2—Dy1i | 2.408 (7) |
| Dy1—O5i | 2.461 (6) | O5—Dy1i | 2.461 (6) |
| I1—O1 | 1.804 (7) | O6—Dy1iii | 2.415 (6) |
| I1—O2 | 1.809 (7) | O8—Dy1ii | 2.412 (7) |
| I1—O3 | 1.814 (7) | ||
| O4—Dy1—O2i | 75.1 (2) | O7—Dy1—O10 | 126.1 (2) |
| O4—Dy1—O8ii | 149.7 (2) | O1—Dy1—O10 | 151.9 (2) |
| O2i—Dy1—O8ii | 78.5 (2) | O4—Dy1—O5i | 112.2 (2) |
| O4—Dy1—O6iii | 90.6 (2) | O2i—Dy1—O5i | 73.6 (2) |
| O2i—Dy1—O6iii | 142.8 (2) | O8ii—Dy1—O5i | 73.6 (2) |
| O8ii—Dy1—O6iii | 101.7 (2) | O6iii—Dy1—O5i | 142.8 (2) |
| O4—Dy1—O7 | 135.1 (3) | O7—Dy1—O5i | 72.9 (2) |
| O2i—Dy1—O7 | 141.9 (2) | O1—Dy1—O5i | 69.4 (2) |
| O8ii—Dy1—O7 | 75.1 (2) | O10—Dy1—O5i | 132.9 (3) |
| O6iii—Dy1—O7 | 70.3 (2) | O1—I1—O2 | 96.8 (3) |
| O4—Dy1—O1 | 69.2 (2) | O1—I1—O3 | 97.2 (3) |
| O2i—Dy1—O1 | 111.8 (3) | O2—I1—O3 | 97.7 (3) |
| O8ii—Dy1—O1 | 136.0 (2) | O6—I2—O4 | 99.6 (3) |
| O6iii—Dy1—O1 | 93.9 (3) | O6—I2—O5 | 97.8 (3) |
| O7—Dy1—O1 | 72.0 (2) | O4—I2—O5 | 95.5 (3) |
| O4—Dy1—O10 | 84.5 (3) | O9—I3—O8 | 99.4 (3) |
| O2i—Dy1—O10 | 68.8 (3) | O9—I3—O7 | 101.4 (3) |
| O8ii—Dy1—O10 | 72.1 (2) | O8—I3—O7 | 96.1 (3) |
| O6iii—Dy1—O10 | 75.9 (3) |
| H··· | ||||
| O10—H10A···O3iv | 0.80 | 2.29 | 2.873 (10) | 131 |
| O10—H10B···O9iv | 0.80 | 2.33 | 2.753 (11) | 114 |
| O11—H11A···O8v | 0.80 | 2.22 | 2.954 (11) | 153 |
| O11—H11B···O7i | 0.80 | 2.26 | 2.946 (11) | 145 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O10—H10 | 0.80 | 2.29 | 2.873 (10) | 131 |
| O10—H10 | 0.80 | 2.33 | 2.753 (11) | 114 |
| O11—H11 | 0.80 | 2.22 | 2.954 (11) | 153 |
| O11—H11 | 0.80 | 2.26 | 2.946 (11) | 145 |
Symmetry codes: (i) ; (ii) ; (iii) .