| Literature DB >> 21583217 |
B Thimme Gowda, Sabine Foro, Hiromitsu Terao, Hartmut Fuess.
Abstract
The structure of the title compound, C(8)H(6)Cl(3)NO, contains two mol-ecules in the asymmetric unit. In each independent mol-ecule, the conformation of the N-H bond is almost syn to the ortho-chloro substituent and the conformation of the C=O bond is anti to the N-H bond. The mol-ecules in the crystal structure are linked into supra-molecular chains through N-H⋯O hydrogen bonding along the a axis.Entities:
Year: 2009 PMID: 21583217 PMCID: PMC2969726 DOI: 10.1107/S1600536809018753
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H6Cl3NO | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1466 reflections |
| θ = 2.5–27.8° | |
| µ = 0.89 mm−1 | |
| β = 90.12 (1)° | Needle, colourless |
| 0.48 × 0.05 × 0.05 mm | |
| Oxford Diffraction Xcalibur single-crystal diffractometer with a Sapphire CCD detector | 3590 independent reflections |
| Radiation source: fine-focus sealed tube | 1475 reflections with |
| graphite | |
| Rotation method data acquisition using ω and φ scans | θmax = 25.3°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 7393 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3590 reflections | (Δ/σ)max = 0.005 |
| 241 parameters | Δρmax = 0.44 e Å−3 |
| 0 restraints | Δρmin = −0.39 e Å−3 |
| Experimental. Absorption correction: CrysAlis RED (Oxford Diffraction, 2007) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.5403 (4) | 0.71319 (16) | 0.00042 (6) | 0.0507 (6) | |
| Cl2 | −0.1002 (5) | 0.42476 (17) | 0.07378 (7) | 0.0699 (8) | |
| Cl3 | 0.0189 (5) | 1.14606 (18) | 0.06668 (10) | 0.0935 (9) | |
| O1 | −0.1586 (10) | 0.9317 (4) | 0.06073 (19) | 0.0672 (18) | |
| N1 | 0.2740 (11) | 0.8593 (5) | 0.06055 (18) | 0.0362 (16) | |
| H1N | 0.460 (14) | 0.876 (5) | 0.0583 (19) | 0.043* | |
| C1 | 0.1840 (14) | 0.7560 (5) | 0.0644 (2) | 0.0309 (17) | |
| C2 | 0.2935 (13) | 0.6804 (6) | 0.0379 (2) | 0.0330 (18) | |
| C3 | 0.2098 (15) | 0.5774 (6) | 0.0412 (2) | 0.0393 (19) | |
| H3 | 0.2862 | 0.5270 | 0.0238 | 0.047* | |
| C4 | 0.0105 (16) | 0.5522 (6) | 0.0710 (2) | 0.047 (2) | |
| C5 | −0.0950 (15) | 0.6242 (7) | 0.0982 (2) | 0.046 (2) | |
| H5 | −0.2243 | 0.6049 | 0.1186 | 0.055* | |
| C6 | −0.0095 (15) | 0.7241 (6) | 0.0950 (2) | 0.044 (2) | |
| H6 | −0.0810 | 0.7727 | 0.1137 | 0.053* | |
| C7 | 0.0950 (14) | 0.9405 (6) | 0.0596 (2) | 0.0386 (19) | |
| C8 | 0.2440 (16) | 1.0429 (6) | 0.0563 (3) | 0.063 (3) | |
| H8A | 0.3208 | 1.0505 | 0.0283 | 0.075* | |
| H8B | 0.3997 | 1.0444 | 0.0761 | 0.075* | |
| Cl4 | 1.0368 (4) | 0.28731 (17) | 0.25087 (6) | 0.0545 (6) | |
| Cl5 | 0.4118 (6) | 0.60945 (19) | 0.20155 (8) | 0.0830 (8) | |
| Cl6 | 0.4903 (4) | −0.11251 (17) | 0.16628 (7) | 0.0586 (6) | |
| O2 | 0.3241 (10) | 0.1017 (4) | 0.1770 (2) | 0.0701 (18) | |
| N2 | 0.7526 (12) | 0.1738 (5) | 0.1816 (2) | 0.0422 (18) | |
| H2N | 0.912 (15) | 0.163 (6) | 0.181 (2) | 0.051* | |
| C9 | 0.6701 (14) | 0.2773 (6) | 0.1861 (2) | 0.0335 (17) | |
| C10 | 0.7879 (14) | 0.3385 (6) | 0.2170 (2) | 0.0381 (19) | |
| C11 | 0.7131 (15) | 0.4406 (6) | 0.2217 (2) | 0.045 (2) | |
| H11 | 0.7958 | 0.4811 | 0.2425 | 0.054* | |
| C12 | 0.5141 (17) | 0.4817 (6) | 0.1952 (3) | 0.049 (2) | |
| C13 | 0.3952 (15) | 0.4215 (7) | 0.1645 (3) | 0.049 (2) | |
| H13 | 0.2595 | 0.4499 | 0.1469 | 0.059* | |
| C14 | 0.4723 (15) | 0.3210 (6) | 0.1595 (2) | 0.044 (2) | |
| H14 | 0.3922 | 0.2817 | 0.1381 | 0.052* | |
| C15 | 0.5757 (15) | 0.0933 (6) | 0.1774 (2) | 0.0374 (19) | |
| C16 | 0.7204 (15) | −0.0104 (6) | 0.1735 (3) | 0.062 (3) | |
| H16A | 0.8307 | −0.0229 | 0.1986 | 0.074* | |
| H16B | 0.8496 | −0.0079 | 0.1500 | 0.074* |
| Cl1 | 0.0426 (12) | 0.0541 (13) | 0.0555 (13) | −0.0074 (10) | 0.0135 (9) | −0.0047 (11) |
| Cl2 | 0.0955 (19) | 0.0486 (15) | 0.0657 (16) | −0.0266 (12) | −0.0015 (13) | 0.0074 (12) |
| Cl3 | 0.0723 (18) | 0.0432 (15) | 0.165 (3) | 0.0070 (13) | 0.0398 (16) | 0.0038 (16) |
| O1 | 0.018 (3) | 0.043 (4) | 0.140 (6) | 0.002 (3) | 0.005 (3) | −0.001 (3) |
| N1 | 0.016 (3) | 0.034 (4) | 0.058 (4) | −0.007 (3) | 0.001 (3) | 0.000 (3) |
| C1 | 0.029 (4) | 0.030 (4) | 0.034 (4) | 0.006 (3) | −0.006 (3) | −0.002 (4) |
| C2 | 0.029 (4) | 0.045 (5) | 0.025 (4) | 0.000 (3) | 0.003 (3) | 0.006 (4) |
| C3 | 0.040 (5) | 0.028 (5) | 0.050 (5) | 0.002 (4) | 0.003 (4) | −0.004 (4) |
| C4 | 0.049 (5) | 0.051 (6) | 0.040 (5) | −0.012 (4) | −0.012 (4) | 0.004 (4) |
| C5 | 0.037 (5) | 0.055 (6) | 0.046 (5) | −0.015 (4) | 0.013 (4) | 0.002 (5) |
| C6 | 0.047 (5) | 0.050 (6) | 0.036 (5) | 0.004 (4) | 0.012 (4) | −0.007 (4) |
| C7 | 0.021 (4) | 0.035 (5) | 0.060 (5) | 0.003 (4) | −0.001 (4) | −0.008 (4) |
| C8 | 0.033 (5) | 0.043 (5) | 0.113 (8) | −0.002 (4) | 0.007 (4) | 0.001 (5) |
| Cl4 | 0.0407 (12) | 0.0626 (15) | 0.0602 (13) | 0.0013 (10) | −0.0087 (9) | −0.0003 (12) |
| Cl5 | 0.106 (2) | 0.0461 (15) | 0.097 (2) | 0.0256 (14) | −0.0060 (15) | −0.0084 (14) |
| Cl6 | 0.0516 (13) | 0.0489 (13) | 0.0753 (16) | −0.0065 (11) | −0.0020 (11) | −0.0133 (12) |
| O2 | 0.020 (3) | 0.047 (4) | 0.143 (6) | 0.010 (3) | −0.003 (3) | −0.013 (4) |
| N2 | 0.020 (3) | 0.042 (4) | 0.064 (4) | 0.002 (3) | 0.000 (3) | −0.003 (3) |
| C9 | 0.028 (4) | 0.036 (5) | 0.037 (4) | 0.000 (3) | 0.008 (3) | 0.001 (4) |
| C10 | 0.031 (4) | 0.043 (5) | 0.041 (5) | −0.001 (4) | −0.001 (3) | 0.001 (4) |
| C11 | 0.045 (5) | 0.043 (5) | 0.047 (5) | −0.003 (4) | 0.000 (4) | −0.008 (4) |
| C12 | 0.054 (6) | 0.044 (5) | 0.051 (5) | 0.012 (4) | 0.011 (4) | 0.001 (5) |
| C13 | 0.043 (5) | 0.054 (6) | 0.049 (5) | 0.007 (4) | −0.007 (4) | 0.006 (5) |
| C14 | 0.043 (5) | 0.041 (5) | 0.046 (5) | 0.005 (4) | −0.004 (4) | 0.004 (4) |
| C15 | 0.022 (4) | 0.045 (5) | 0.045 (5) | 0.002 (4) | 0.001 (3) | −0.005 (4) |
| C16 | 0.035 (5) | 0.040 (5) | 0.110 (8) | −0.004 (4) | −0.001 (5) | −0.003 (5) |
| Cl1—C2 | 1.728 (7) | Cl4—C10 | 1.730 (7) |
| Cl2—C4 | 1.731 (8) | Cl5—C12 | 1.733 (8) |
| Cl3—C8 | 1.740 (8) | Cl6—C16 | 1.728 (8) |
| O1—C7 | 1.209 (7) | O2—C15 | 1.199 (7) |
| N1—C7 | 1.350 (9) | N2—C15 | 1.344 (9) |
| N1—C1 | 1.407 (9) | N2—C9 | 1.401 (9) |
| N1—H1N | 0.91 (7) | N2—H2N | 0.77 (7) |
| C1—C2 | 1.392 (9) | C9—C10 | 1.381 (9) |
| C1—C6 | 1.403 (9) | C9—C14 | 1.385 (9) |
| C2—C3 | 1.393 (10) | C10—C11 | 1.376 (10) |
| C3—C4 | 1.381 (10) | C11—C12 | 1.373 (10) |
| C3—H3 | 0.9300 | C11—H11 | 0.9300 |
| C4—C5 | 1.367 (11) | C12—C13 | 1.371 (10) |
| C5—C6 | 1.358 (10) | C13—C14 | 1.360 (11) |
| C5—H5 | 0.9300 | C13—H13 | 0.9300 |
| C6—H6 | 0.9300 | C14—H14 | 0.9300 |
| C7—C8 | 1.505 (11) | C15—C16 | 1.511 (10) |
| C8—H8A | 0.9700 | C16—H16A | 0.9700 |
| C8—H8B | 0.9700 | C16—H16B | 0.9700 |
| C7—N1—C1 | 123.3 (6) | C15—N2—C9 | 125.1 (6) |
| C7—N1—H1N | 115 (4) | C15—N2—H2N | 118 (6) |
| C1—N1—H1N | 122 (4) | C9—N2—H2N | 117 (6) |
| C2—C1—C6 | 117.4 (7) | C10—C9—C14 | 118.4 (7) |
| C2—C1—N1 | 119.9 (6) | C10—C9—N2 | 120.5 (6) |
| C6—C1—N1 | 122.6 (6) | C14—C9—N2 | 121.1 (6) |
| C1—C2—C3 | 121.2 (6) | C11—C10—C9 | 121.6 (7) |
| C1—C2—Cl1 | 120.1 (6) | C11—C10—Cl4 | 118.3 (6) |
| C3—C2—Cl1 | 118.7 (6) | C9—C10—Cl4 | 120.1 (6) |
| C4—C3—C2 | 118.2 (7) | C12—C11—C10 | 118.8 (7) |
| C4—C3—H3 | 120.9 | C12—C11—H11 | 120.6 |
| C2—C3—H3 | 120.9 | C10—C11—H11 | 120.6 |
| C5—C4—C3 | 121.8 (7) | C13—C12—C11 | 120.1 (7) |
| C5—C4—Cl2 | 120.3 (7) | C13—C12—Cl5 | 120.6 (6) |
| C3—C4—Cl2 | 117.9 (7) | C11—C12—Cl5 | 119.3 (7) |
| C6—C5—C4 | 119.4 (7) | C14—C13—C12 | 121.1 (7) |
| C6—C5—H5 | 120.3 | C14—C13—H13 | 119.4 |
| C4—C5—H5 | 120.3 | C12—C13—H13 | 119.4 |
| C5—C6—C1 | 121.8 (7) | C13—C14—C9 | 120.0 (7) |
| C5—C6—H6 | 119.1 | C13—C14—H14 | 120.0 |
| C1—C6—H6 | 119.1 | C9—C14—H14 | 120.0 |
| O1—C7—N1 | 123.5 (7) | O2—C15—N2 | 123.6 (7) |
| O1—C7—C8 | 123.5 (7) | O2—C15—C16 | 122.1 (7) |
| N1—C7—C8 | 112.9 (6) | N2—C15—C16 | 114.3 (6) |
| C7—C8—Cl3 | 111.9 (5) | C15—C16—Cl6 | 113.6 (5) |
| C7—C8—H8A | 109.2 | C15—C16—H16A | 108.8 |
| Cl3—C8—H8A | 109.2 | Cl6—C16—H16A | 108.8 |
| C7—C8—H8B | 109.2 | C15—C16—H16B | 108.8 |
| Cl3—C8—H8B | 109.2 | Cl6—C16—H16B | 108.8 |
| H8A—C8—H8B | 107.9 | H16A—C16—H16B | 107.7 |
| C7—N1—C1—C2 | 132.9 (7) | C15—N2—C9—C10 | 132.3 (8) |
| C7—N1—C1—C6 | −48.9 (10) | C15—N2—C9—C14 | −48.6 (10) |
| C6—C1—C2—C3 | 1.3 (9) | C14—C9—C10—C11 | 0.0 (10) |
| N1—C1—C2—C3 | 179.6 (6) | N2—C9—C10—C11 | 179.2 (7) |
| C6—C1—C2—Cl1 | −178.2 (5) | C14—C9—C10—Cl4 | −179.8 (5) |
| N1—C1—C2—Cl1 | 0.1 (8) | N2—C9—C10—Cl4 | −0.7 (9) |
| C1—C2—C3—C4 | 1.2 (10) | C9—C10—C11—C12 | 0.7 (11) |
| Cl1—C2—C3—C4 | −179.4 (5) | Cl4—C10—C11—C12 | −179.5 (6) |
| C2—C3—C4—C5 | −3.0 (11) | C10—C11—C12—C13 | −0.5 (12) |
| C2—C3—C4—Cl2 | 178.1 (5) | C10—C11—C12—Cl5 | 178.6 (6) |
| C3—C4—C5—C6 | 2.3 (11) | C11—C12—C13—C14 | −0.5 (12) |
| Cl2—C4—C5—C6 | −178.9 (6) | Cl5—C12—C13—C14 | −179.5 (6) |
| C4—C5—C6—C1 | 0.4 (11) | C12—C13—C14—C9 | 1.3 (12) |
| C2—C1—C6—C5 | −2.1 (10) | C10—C9—C14—C13 | −1.0 (11) |
| N1—C1—C6—C5 | 179.7 (7) | N2—C9—C14—C13 | 179.9 (7) |
| C1—N1—C7—O1 | −2.1 (12) | C9—N2—C15—O2 | 0.2 (12) |
| C1—N1—C7—C8 | 178.6 (6) | C9—N2—C15—C16 | −179.5 (7) |
| O1—C7—C8—Cl3 | 14.0 (11) | O2—C15—C16—Cl6 | 2.5 (11) |
| N1—C7—C8—Cl3 | −166.8 (5) | N2—C15—C16—Cl6 | −177.8 (6) |
| H··· | ||||
| N1—H1N···O1i | 0.91 (7) | 1.95 (7) | 2.851 (7) | 170 (6) |
| N2—H2N···O2i | 0.77 (7) | 2.11 (7) | 2.872 (7) | 168 (8) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1N⋯O1i | 0.91 (7) | 1.95 (7) | 2.851 (7) | 170 (6) |
| N2—H2N⋯O2i | 0.77 (7) | 2.11 (7) | 2.872 (7) | 168 (8) |
Symmetry code: (i) .