Literature DB >> 21583216

2-Butyl-5-pentyl-benzene-1,3-diol.

Juangjun Jumpathong, Pascal Retailleau, Muna Ali Abdalla, Jamal Ouazzani, Saisamorn Lumyong.   

Abstract

In the title compound, C(15)H(24)O(2), a natural dialkyl-resorcinol commonly named stemphol, the mol-ecules are linked into C(6) and C(2) (2)(4) chains and R(4) (4)(16) rings by inter-molecular O-H⋯O hydrogen bonds, creating mol-ecular sheets parallel to the (010) plane. The alkyl chains are directed orthogonally away from these planes in almost complete extension.

Entities:  

Year:  2009        PMID: 21583216      PMCID: PMC2969635          DOI: 10.1107/S1600536809018820

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, synthesis, biological activity and related structures, see: Achenbach & Kohl (1979 ▶); Andersen & Frisvad (2004 ▶); Marumo et al. (1985 ▶); Solfrizzo et al. (1994 ▶); Stodola et al. (1973 ▶). For structural discussion, see: Etter (1990 ▶); Bernstein et al. (1995 ▶).

Experimental

Crystal data

C15H24O2 M = 236.34 Monoclinic, a = 4.654 (2) Å b = 25.450 (5) Å c = 12.790 (4) Å β = 108.12 (1)° V = 1439.8 (8) Å3 Z = 4 Mo Kα radiation μ = 0.07 mm−1 T = 293 K 0.50 × 0.10 × 0.08 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.881, T max = 0.994 15852 measured reflections 2631 independent reflections 1703 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.131 S = 1.04 2631 reflections 158 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.16 e Å−3 Data collection: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT (Nonius, 1999 ▶); cell refinement: DENZO; data reduction: SCALEPACK (Otwinowski & Minor, 1997 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) and CrystalBuilder (Welter, 2006 ▶); molecular graphics: PLATON (Spek, 2009 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809018820/dn2455sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809018820/dn2455Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H24O2F(000) = 520
Mr = 236.34Dx = 1.090 Mg m3
Monoclinic, P21/cMelting point: 364 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71069 Å
a = 4.654 (2) ÅCell parameters from 2700 reflections
b = 25.450 (5) Åθ = 0.4–25.4°
c = 12.790 (4) ŵ = 0.07 mm1
β = 108.12 (1)°T = 293 K
V = 1439.8 (8) Å3Needle, colourless
Z = 40.50 × 0.10 × 0.08 mm
Nonius KappaCCD diffractometer2631 independent reflections
Radiation source: fine-focus sealed tube1703 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scansθmax = 25.3°, θmin = 2.3°
Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997)h = −5→5
Tmin = 0.881, Tmax = 0.994k = −30→30
15852 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: difference Fourier map
wR(F2) = 0.131H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0625P)2 + 0.1805P] where P = (Fo2 + 2Fc2)/3
2631 reflections(Δ/σ)max < 0.001
158 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.15 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.0951 (3)0.27129 (5)0.28490 (10)0.0555 (4)
H10.26480.27190.32990.083*
O2−0.2986 (2)0.22721 (5)−0.09324 (9)0.0517 (4)
H2−0.20740.2253−0.13860.077*
C1−0.1145 (3)0.24879 (6)0.09661 (13)0.0358 (4)
C2−0.1012 (3)0.21631 (7)0.01107 (13)0.0383 (4)
C30.0994 (4)0.17495 (7)0.02531 (14)0.0428 (4)
H30.10000.1542−0.03450.051*
C40.3006 (3)0.16426 (7)0.12888 (14)0.0414 (4)
C50.2925 (3)0.19620 (7)0.21530 (14)0.0432 (5)
H50.42330.18960.28550.052*
C60.0935 (3)0.23774 (7)0.19898 (13)0.0394 (4)
C7−0.3211 (4)0.29564 (7)0.07705 (15)0.0454 (5)
H7A−0.36740.30380.14410.054*
H7B−0.50920.28710.02070.054*
C8−0.1801 (4)0.34346 (7)0.04135 (17)0.0557 (5)
H8A0.00200.35280.09990.067*
H8B−0.12100.3341−0.02260.067*
C9−0.3832 (5)0.39095 (8)0.0136 (2)0.0756 (7)
H9A−0.56250.3822−0.04680.091*
H9B−0.44720.39990.07660.091*
C10−0.2332 (6)0.43810 (9)−0.0182 (3)0.1069 (10)
H10A−0.07210.45000.04450.160*
H10B−0.37900.4657−0.04300.160*
H10C−0.15290.4286−0.07620.160*
C110.5085 (4)0.11754 (7)0.14655 (16)0.0523 (5)
H11A0.67580.12280.21340.063*
H11B0.59100.11510.08580.063*
C120.3515 (4)0.06650 (7)0.15543 (18)0.0604 (6)
H12A0.17670.06280.09050.073*
H12B0.27830.06870.21850.073*
C130.5435 (4)0.01760 (7)0.16697 (17)0.0594 (5)
H13A0.61710.01530.10400.071*
H13B0.71780.02110.23220.071*
C140.3833 (5)−0.03251 (8)0.1752 (2)0.0848 (8)
H14A0.3137−0.03040.23910.102*
H14B0.2060−0.03540.11090.102*
C150.5672 (6)−0.08146 (9)0.1840 (2)0.0970 (9)
H15A0.6319−0.08480.12000.145*
H15B0.4468−0.11140.18920.145*
H15C0.7409−0.07960.24850.145*
U11U22U33U12U13U23
O10.0453 (7)0.0768 (9)0.0399 (8)0.0016 (7)0.0069 (6)−0.0146 (7)
O20.0446 (7)0.0744 (9)0.0314 (7)0.0080 (6)0.0052 (5)0.0047 (7)
C10.0292 (8)0.0443 (10)0.0339 (9)−0.0028 (7)0.0099 (7)0.0024 (8)
C20.0316 (8)0.0488 (10)0.0311 (9)−0.0041 (8)0.0046 (7)0.0039 (8)
C30.0432 (9)0.0484 (11)0.0367 (10)0.0004 (9)0.0120 (8)−0.0031 (8)
C40.0345 (8)0.0442 (10)0.0442 (11)−0.0015 (8)0.0104 (8)0.0053 (8)
C50.0333 (9)0.0552 (11)0.0350 (10)−0.0007 (8)0.0018 (7)0.0063 (9)
C60.0342 (9)0.0511 (11)0.0325 (10)−0.0050 (8)0.0101 (7)−0.0029 (8)
C70.0369 (9)0.0538 (11)0.0450 (11)0.0028 (8)0.0119 (8)−0.0009 (9)
C80.0491 (10)0.0527 (12)0.0640 (13)0.0043 (9)0.0156 (9)0.0016 (10)
C90.0815 (15)0.0596 (14)0.0889 (17)0.0159 (12)0.0310 (13)0.0062 (13)
C100.131 (2)0.0567 (16)0.138 (3)0.0108 (15)0.050 (2)0.0224 (16)
C110.0440 (10)0.0511 (11)0.0592 (12)0.0069 (9)0.0124 (8)0.0052 (10)
C120.0517 (11)0.0524 (12)0.0753 (14)0.0037 (9)0.0168 (10)0.0068 (11)
C130.0604 (12)0.0521 (12)0.0638 (14)0.0075 (10)0.0167 (10)0.0006 (10)
C140.0828 (16)0.0543 (14)0.113 (2)0.0030 (12)0.0242 (15)0.0058 (13)
C150.118 (2)0.0560 (15)0.113 (2)0.0078 (14)0.0293 (17)−0.0002 (14)
O1—C61.3899 (19)C9—H9A0.9700
O1—H10.8200C9—H9B0.9700
O2—C21.3924 (18)C10—H10A0.9600
O2—H20.8200C10—H10B0.9600
C1—C21.388 (2)C10—H10C0.9600
C1—C61.394 (2)C11—C121.512 (3)
C1—C71.503 (2)C11—H11A0.9700
C2—C31.381 (2)C11—H11B0.9700
C3—C41.391 (2)C12—C131.512 (3)
C3—H30.9300C12—H12A0.9700
C4—C51.382 (2)C12—H12B0.9700
C4—C111.505 (2)C13—C141.497 (3)
C5—C61.378 (2)C13—H13A0.9700
C5—H50.9300C13—H13B0.9700
C7—C81.519 (3)C14—C151.496 (3)
C7—H7A0.9700C14—H14A0.9700
C7—H7B0.9700C14—H14B0.9700
C8—C91.507 (3)C15—H15A0.9600
C8—H8A0.9700C15—H15B0.9600
C8—H8B0.9700C15—H15C0.9600
C9—C101.506 (3)
C6—O1—H1109.5H9A—C9—H9B107.8
C2—O2—H2109.5C9—C10—H10A109.5
C2—C1—C6115.59 (15)C9—C10—H10B109.5
C2—C1—C7121.63 (14)H10A—C10—H10B109.5
C6—C1—C7122.55 (15)C9—C10—H10C109.5
C3—C2—C1122.97 (15)H10A—C10—H10C109.5
C3—C2—O2119.73 (15)H10B—C10—H10C109.5
C1—C2—O2117.29 (14)C4—C11—C12112.77 (14)
C2—C3—C4120.13 (16)C4—C11—H11A109.0
C2—C3—H3119.9C12—C11—H11A109.0
C4—C3—H3119.9C4—C11—H11B109.0
C5—C4—C3117.98 (15)C12—C11—H11B109.0
C5—C4—C11121.38 (16)H11A—C11—H11B107.8
C3—C4—C11120.57 (17)C11—C12—C13115.46 (16)
C6—C5—C4120.95 (15)C11—C12—H12A108.4
C6—C5—H5119.5C13—C12—H12A108.4
C4—C5—H5119.5C11—C12—H12B108.4
C5—C6—O1120.90 (14)C13—C12—H12B108.4
C5—C6—C1122.35 (16)H12A—C12—H12B107.5
O1—C6—C1116.74 (14)C14—C13—C12114.58 (17)
C1—C7—C8111.85 (14)C14—C13—H13A108.6
C1—C7—H7A109.2C12—C13—H13A108.6
C8—C7—H7A109.2C14—C13—H13B108.6
C1—C7—H7B109.2C12—C13—H13B108.6
C8—C7—H7B109.2H13A—C13—H13B107.6
H7A—C7—H7B107.9C15—C14—C13115.4 (2)
C9—C8—C7114.57 (16)C15—C14—H14A108.4
C9—C8—H8A108.6C13—C14—H14A108.4
C7—C8—H8A108.6C15—C14—H14B108.4
C9—C8—H8B108.6C13—C14—H14B108.4
C7—C8—H8B108.6H14A—C14—H14B107.5
H8A—C8—H8B107.6C14—C15—H15A109.5
C10—C9—C8113.16 (18)C14—C15—H15B109.5
C10—C9—H9A108.9H15A—C15—H15B109.5
C8—C9—H9A108.9C14—C15—H15C109.5
C10—C9—H9B108.9H15A—C15—H15C109.5
C8—C9—H9B108.9H15B—C15—H15C109.5
C6—C1—C2—C31.2 (2)C7—C1—C6—C5−176.77 (15)
C7—C1—C2—C3175.85 (15)C2—C1—C6—O1176.89 (14)
C6—C1—C2—O2−177.88 (13)C7—C1—C6—O12.3 (2)
C7—C1—C2—O2−3.2 (2)C2—C1—C7—C8−83.9 (2)
C1—C2—C3—C4−0.1 (2)C6—C1—C7—C890.4 (2)
O2—C2—C3—C4179.01 (14)C1—C7—C8—C9176.41 (17)
C2—C3—C4—C5−0.2 (2)C7—C8—C9—C10178.26 (19)
C2—C3—C4—C11176.65 (15)C5—C4—C11—C1298.0 (2)
C3—C4—C5—C6−0.8 (2)C3—C4—C11—C12−78.7 (2)
C11—C4—C5—C6−177.58 (15)C4—C11—C12—C13176.76 (17)
C4—C5—C6—O1−177.00 (15)C11—C12—C13—C14−179.8 (2)
C4—C5—C6—C12.0 (2)C12—C13—C14—C15178.6 (2)
C2—C1—C6—C5−2.2 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.821.962.767 (2)167
O2—H2···O1ii0.821.952.750 (2)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2i0.821.962.767 (2)167
O2—H2⋯O1ii0.821.952.750 (2)165

Symmetry codes: (i) ; (ii) .

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