Literature DB >> 21583205

4-(4-Fluoro-phen-yl)-2-oxo-1,2,5,6-tetra-hydro-benzo[h]quinoline-3-carbonitrile.

Jinpeng Zhang, Jie Ding, Shu Yan, Liangce Rong, Lichun Xu.   

Abstract

In the mol-ecule of the title compound, C(20)H(13)FN(2)O, the fluoro-phenyl ring is oriented at a dihedral angle of 72.76 (3)° with respect to the fused benzene ring. In the crystal structure, inter-molecular N-H⋯O, C-H⋯O and C-H⋯F inter-actions link the mol-ecules into chains. π-π contacts between the quinoline and benzene rings [centroid-centroid distance = 3.918 (3) Å] may further stabilize the structure. A weak C-H⋯π inter-action is also present. The O atom and two of the CH(2) groups of the quinoline ring system are disordered over two positions. The O atom was refined with occupancies of 0.489 (17) and 0.511 (17), while C and H atoms were refined with occupancies of 0.435 (13) and 0.565 (13).

Entities:  

Year:  2009        PMID: 21583205      PMCID: PMC2969758          DOI: 10.1107/S1600536809017991

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to substituted six-membered lactams, see: Daly (1998 ▶); Plunkett (1994 ▶); Robertson et al. (1986 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C20H13FN2O M = 316.32 Triclinic, a = 8.116 (10) Å b = 9.278 (12) Å c = 11.263 (14) Å α = 98.674 (19)° β = 105.095 (17)° γ = 104.846 (18)° V = 769.7 (16) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 298 K 0.48 × 0.35 × 0.33 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.956, T max = 0.970 3950 measured reflections 2656 independent reflections 1399 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.144 S = 1.00 2656 reflections 240 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809017991/hk2684sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809017991/hk2684Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H13FN2OZ = 2
Mr = 316.32F(000) = 328
Triclinic, P1Dx = 1.365 Mg m3
Hall symbol: -P 1Melting point > 598 K
a = 8.116 (10) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.278 (12) ÅCell parameters from 929 reflections
c = 11.263 (14) Åθ = 2.3–25.4°
α = 98.674 (19)°µ = 0.09 mm1
β = 105.095 (17)°T = 298 K
γ = 104.846 (18)°Block, colourless
V = 769.7 (16) Å30.48 × 0.35 × 0.33 mm
Bruker SMART CCD area-detector diffractometer2656 independent reflections
Radiation source: fine-focus sealed tube1399 reflections with I > 2σ(I)
graphiteRint = 0.020
φ and ω scansθmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.956, Tmax = 0.970k = −11→8
3950 measured reflectionsl = −9→13
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048H-atom parameters constrained
wR(F2) = 0.144w = 1/[σ2(Fo2) + (0.0683P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
2656 reflectionsΔρmax = 0.15 e Å3
240 parametersΔρmin = −0.17 e Å3
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
F10.2899 (2)0.4261 (2)−0.18711 (16)0.1127 (7)
N10.2029 (3)0.1315 (2)0.45914 (18)0.0580 (6)
H10.19260.09480.52350.070*
N2−0.2136 (3)0.1660 (3)0.0916 (2)0.0781 (7)
O1−0.101 (3)0.0761 (19)0.3875 (16)0.063 (2)0.489 (17)
O1'−0.100 (2)0.0203 (19)0.3604 (16)0.063 (2)0.511 (17)
C10.0482 (3)0.1170 (3)0.3667 (2)0.0589 (7)
C20.0742 (3)0.1847 (3)0.2646 (2)0.0474 (6)
C30.2423 (3)0.2493 (3)0.2576 (2)0.0449 (6)
C40.3947 (3)0.2594 (3)0.3564 (2)0.0514 (7)
C50.3716 (3)0.1991 (3)0.4576 (2)0.0441 (6)
C60.5250 (3)0.2014 (3)0.5626 (2)0.0472 (6)
C70.5053 (4)0.1393 (3)0.6645 (2)0.0611 (7)
H70.39080.09750.66940.073*
C80.6514 (4)0.1387 (3)0.7579 (2)0.0673 (8)
H80.63540.09730.82590.081*
C90.8191 (4)0.1978 (3)0.7521 (3)0.0705 (8)
H90.91810.19540.81490.085*
C100.8420 (4)0.2613 (4)0.6529 (3)0.0817 (9)
H100.95750.30210.64960.098*
C110.6977 (4)0.2660 (3)0.5580 (2)0.0652 (8)
C120.7151 (13)0.2943 (16)0.4310 (10)0.060 (2)0.435 (13)
H12A0.83450.36110.44290.072*0.435 (13)
H12B0.69640.19790.37400.072*0.435 (13)
C130.5770 (13)0.3675 (14)0.3755 (13)0.061 (3)0.435 (13)
H13A0.59550.46400.43230.073*0.435 (13)
H13B0.58720.38800.29530.073*0.435 (13)
C12'0.7237 (10)0.3759 (13)0.4687 (7)0.069 (2)0.565 (13)
H12C0.70970.47290.50270.083*0.565 (13)
H12D0.84320.39540.46080.083*0.565 (13)
C13'0.5852 (10)0.3014 (12)0.3417 (7)0.059 (2)0.565 (13)
H13C0.60680.20950.30460.071*0.565 (13)
H13D0.59360.37100.28580.071*0.565 (13)
C140.2601 (3)0.3026 (3)0.1417 (2)0.0493 (6)
C150.2276 (4)0.4341 (3)0.1176 (3)0.0681 (8)
H150.19760.49560.17640.082*
C160.2388 (4)0.4774 (4)0.0065 (3)0.0769 (9)
H160.21650.5671−0.00980.092*
C170.2827 (4)0.3865 (4)−0.0771 (3)0.0729 (9)
C180.3162 (4)0.2565 (4)−0.0566 (3)0.0858 (10)
H180.34560.1957−0.11630.103*
C190.3064 (4)0.2146 (4)0.0539 (3)0.0769 (9)
H190.33140.12560.06960.092*
C20−0.0853 (4)0.1739 (3)0.1674 (2)0.0561 (7)
U11U22U33U12U13U23
F10.0932 (13)0.1675 (19)0.0723 (12)0.0028 (12)0.0250 (10)0.0801 (12)
N10.0489 (13)0.0912 (17)0.0447 (12)0.0206 (12)0.0199 (11)0.0405 (12)
N20.0698 (17)0.100 (2)0.0663 (16)0.0261 (15)0.0106 (14)0.0435 (15)
O10.0480 (12)0.100 (8)0.058 (6)0.025 (5)0.027 (3)0.044 (5)
O1'0.0480 (12)0.100 (8)0.058 (6)0.025 (5)0.027 (3)0.044 (5)
C10.0495 (16)0.088 (2)0.0505 (16)0.0231 (15)0.0207 (14)0.0367 (15)
C20.0511 (15)0.0574 (16)0.0420 (14)0.0187 (13)0.0187 (12)0.0256 (12)
C30.0535 (15)0.0467 (15)0.0418 (14)0.0153 (12)0.0212 (12)0.0207 (12)
C40.0509 (15)0.0569 (16)0.0503 (15)0.0113 (13)0.0198 (13)0.0266 (13)
C50.0461 (14)0.0482 (15)0.0414 (14)0.0141 (12)0.0164 (12)0.0163 (12)
C60.0485 (15)0.0505 (16)0.0426 (14)0.0140 (13)0.0143 (12)0.0131 (12)
C70.0549 (17)0.078 (2)0.0479 (16)0.0119 (14)0.0124 (13)0.0282 (14)
C80.072 (2)0.068 (2)0.0521 (17)0.0144 (16)0.0056 (16)0.0245 (15)
C90.064 (2)0.080 (2)0.0585 (19)0.0225 (17)0.0024 (15)0.0179 (16)
C100.0517 (18)0.114 (3)0.080 (2)0.0235 (18)0.0158 (16)0.037 (2)
C110.0536 (17)0.085 (2)0.0588 (17)0.0193 (15)0.0158 (14)0.0276 (16)
C120.043 (4)0.072 (6)0.068 (5)0.015 (5)0.020 (4)0.026 (4)
C130.065 (5)0.062 (6)0.057 (5)0.012 (4)0.024 (4)0.024 (4)
C12'0.055 (3)0.079 (5)0.071 (4)0.010 (4)0.021 (3)0.029 (4)
C13'0.049 (3)0.071 (5)0.062 (5)0.010 (4)0.024 (3)0.032 (4)
C140.0499 (15)0.0571 (16)0.0440 (15)0.0110 (13)0.0178 (12)0.0253 (13)
C150.084 (2)0.0655 (19)0.0653 (19)0.0249 (16)0.0280 (16)0.0360 (15)
C160.077 (2)0.075 (2)0.079 (2)0.0134 (17)0.0159 (18)0.0533 (18)
C170.0537 (18)0.108 (3)0.0502 (18)−0.0009 (18)0.0128 (14)0.0486 (19)
C180.104 (3)0.112 (3)0.064 (2)0.038 (2)0.0474 (19)0.041 (2)
C190.112 (3)0.086 (2)0.0628 (19)0.046 (2)0.0480 (19)0.0436 (17)
C200.0602 (18)0.0676 (18)0.0495 (17)0.0195 (15)0.0222 (15)0.0318 (14)
F1—C171.356 (3)C10—C111.381 (4)
N1—C51.358 (3)C10—H100.9300
N1—C11.367 (3)C11—C121.528 (9)
N1—H10.8600C11—C12'1.550 (8)
N2—C201.139 (3)C12—C131.505 (14)
O1—C11.267 (18)C12—H12A0.9700
O1'—C11.279 (18)C12—H12B0.9700
C1—C21.428 (3)C13—H13A0.9700
C2—C31.370 (3)C13—H13B0.9700
C2—C201.431 (4)C12'—C13'1.501 (12)
C3—C41.404 (3)C12'—H12C0.9700
C3—C141.491 (3)C12'—H12D0.9700
C4—C51.377 (3)C13'—H13C0.9700
C4—C131.499 (10)C13'—H13D0.9700
C4—C13'1.553 (8)C14—C151.363 (4)
C5—C61.470 (3)C14—C191.376 (4)
C6—C71.387 (3)C15—C161.389 (4)
C6—C111.394 (4)C15—H150.9300
C7—C81.367 (4)C16—C171.347 (4)
C7—H70.9300C16—H160.9300
C8—C91.354 (4)C17—C181.342 (4)
C8—H80.9300C18—C191.375 (4)
C9—C101.371 (4)C18—H180.9300
C9—H90.9300C19—H190.9300
C5—N1—C1125.3 (2)C13—C12—H12A109.9
C5—N1—H1117.4C11—C12—H12A109.9
C1—N1—H1117.4C13—C12—H12B109.9
O1—C1—N1119.7 (9)C11—C12—H12B109.9
O1'—C1—N1120.2 (8)H12A—C12—H12B108.3
O1—C1—C2124.0 (9)C4—C13—C12108.2 (9)
O1'—C1—C2123.2 (8)C4—C13—H13A110.1
N1—C1—C2114.7 (2)C12—C13—H13A110.1
C3—C2—C1121.7 (2)C4—C13—H13B110.1
C3—C2—C20122.2 (2)C12—C13—H13B110.1
C1—C2—C20116.0 (2)H13A—C13—H13B108.4
C2—C3—C4120.1 (2)C13'—C12'—C11108.2 (7)
C2—C3—C14119.1 (2)C13'—C12'—H12C110.1
C4—C3—C14120.8 (2)C11—C12'—H12C110.1
C5—C4—C3118.8 (2)C13'—C12'—H12D110.1
C5—C4—C13116.3 (5)C11—C12'—H12D110.1
C3—C4—C13122.8 (5)H12C—C12'—H12D108.4
C5—C4—C13'118.0 (4)C12'—C13'—C4109.8 (7)
C3—C4—C13'121.8 (4)C12'—C13'—H13C109.7
N1—C5—C4119.4 (2)C4—C13'—H13C109.7
N1—C5—C6118.8 (2)C12'—C13'—H13D109.7
C4—C5—C6121.8 (2)C4—C13'—H13D109.7
C7—C6—C11118.7 (2)H13C—C13'—H13D108.2
C7—C6—C5122.9 (2)C15—C14—C19118.4 (2)
C11—C6—C5118.4 (2)C15—C14—C3122.3 (2)
C8—C7—C6121.1 (3)C19—C14—C3119.2 (2)
C8—C7—H7119.5C14—C15—C16120.9 (3)
C6—C7—H7119.5C14—C15—H15119.5
C9—C8—C7120.4 (3)C16—C15—H15119.5
C9—C8—H8119.8C17—C16—C15118.4 (3)
C7—C8—H8119.8C17—C16—H16120.8
C8—C9—C10119.5 (3)C15—C16—H16120.8
C8—C9—H9120.2C18—C17—C16122.5 (3)
C10—C9—H9120.2C18—C17—F1118.7 (3)
C9—C10—C11121.6 (3)C16—C17—F1118.8 (3)
C9—C10—H10119.2C17—C18—C19118.9 (3)
C11—C10—H10119.2C17—C18—H18120.5
C10—C11—C6118.7 (3)C19—C18—H18120.5
C10—C11—C12121.7 (4)C18—C19—C14120.9 (3)
C6—C11—C12117.1 (4)C18—C19—H19119.6
C10—C11—C12'120.9 (4)C14—C19—H19119.6
C6—C11—C12'118.5 (4)N2—C20—C2178.8 (3)
C13—C12—C11108.8 (9)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.862.082.883 (3)155
C7—H7···O1i0.932.353.223 (3)157
C12—H12B···O1ii0.972.212.863 (3)124
C13—H13B···F1iii0.972.423.270 (3)147
C15—H15···Cg3iv0.932.903.671 (3)141
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.862.082.883 (3)155
C7—H7⋯O1i0.932.353.223 (3)157
C12—H12B⋯O1ii0.972.212.863 (3)124
C13—H13B⋯F1iii0.972.423.270 (3)147
C15—H15⋯Cg3iv0.932.903.671 (3)141

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  5 in total

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Authors:  A O Plunkett
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2.  A short history of SHELX.

Authors:  George M Sheldrick
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Review 3.  Thirty years of discovering arthropod alkaloids in amphibian skin.

Authors:  J W Daly
Journal:  J Nat Prod       Date:  1998-01       Impact factor: 4.050

4.  Bipyridine cardiotonics: the three-dimensional structures of amrinone and milrinone.

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5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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