Literature DB >> 21583203

Ethyl-enediammonium dichloride.

Milad Gabro1, Roger A Lalancette, Ivan Bernal.   

Abstract

The title ionic compound, C(2)H(10)N(2) (2+)·2Cl(-), crystallizes with a center of symmetry within the cation. Each of the positively charged ammonium ends of the mol-ecule is trigonally hydrogen bonded to three different chloride counter-ions, while each of the chloride ions is trigonally hydrogen bonded to three different ethyl-enediammonium cations. The hydrogen-bonding network leads to stabilization of the structure.

Entities:  

Year:  2009        PMID: 21583203      PMCID: PMC2969764          DOI: 10.1107/S1600536809018327

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of ethyl­enediamine, see: Kotti et al. (2006 ▶); Warner (1912 ▶).

Experimental

Crystal data

C2H10N2 2+·2Cl− M = 133.02 Monoclinic, a = 4.3807 (3) Å b = 6.8569 (4) Å c = 9.9464 (5) Å β = 91.192 (2)° V = 298.71 (3) Å3 Z = 2 Cu Kα radiation μ = 8.71 mm−1 T = 100 K 0.45 × 0.30 × 0.29 mm

Data collection

Bruker SMART CCD APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2001 ▶) T min = 0.085, T max = 0.090 1654 measured reflections 521 independent reflections 520 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.070 S = 1.15 521 reflections 44 parameters Only H-atom coordinates refined Δρmax = 0.41 e Å−3 Δρmin = −0.31 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809018327/lh2823sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809018327/lh2823Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C2H10N22+·2ClF(000) = 140
Mr = 133.02Dx = 1.479 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybcCell parameters from 1684 reflections
a = 4.3807 (3) Åθ = 4.5–67.4°
b = 6.8569 (4) ŵ = 8.71 mm1
c = 9.9464 (5) ÅT = 100 K
β = 91.192 (2)°Parallelepiped, colourless
V = 298.71 (3) Å30.45 × 0.30 × 0.29 mm
Z = 2
Bruker SMART CCD APEXII area-detector diffractometer521 independent reflections
Radiation source: fine-focus sealed tube520 reflections with I > 2σ(I)
graphiteRint = 0.022
φ and ω scansθmax = 67.8°, θmin = 7.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2001)h = −5→4
Tmin = 0.085, Tmax = 0.090k = −8→8
1654 measured reflectionsl = −11→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.028Only H-atom coordinates refined
wR(F2) = 0.070w = 1/[σ2(Fo2) + (0.0415P)2 + 0.1865P] where P = (Fo2 + 2Fc2)/3
S = 1.15(Δ/σ)max < 0.001
521 reflectionsΔρmax = 0.41 e Å3
44 parametersΔρmin = −0.31 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.066 (5)
Experimental. crystal mounted on cryoloop using Paratone-N
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.91302 (8)0.07997 (5)0.67014 (3)0.0043 (3)
C10.3856 (4)0.0762 (2)0.97532 (18)0.0037 (4)
H1A0.254 (5)0.019 (3)0.903 (2)0.004*
H1B0.269 (5)0.131 (3)1.047 (2)0.004*
N10.5508 (3)0.2442 (2)0.91610 (14)0.0044 (4)
H1C0.660 (5)0.305 (3)0.983 (2)0.007*
H1D0.444 (5)0.328 (4)0.885 (2)0.007*
H1E0.654 (5)0.206 (3)0.845 (2)0.007*
U11U22U33U12U13U23
Cl10.0057 (3)0.0048 (3)0.0023 (3)−0.00036 (11)−0.00138 (18)−0.00050 (11)
C10.0017 (8)0.0051 (9)0.0041 (8)−0.0003 (6)−0.0013 (7)0.0001 (5)
N10.0067 (7)0.0032 (7)0.0031 (7)0.0013 (6)−0.0015 (6)0.0009 (5)
C1—N11.488 (2)N1—H1C0.91 (2)
C1—C1i1.522 (3)N1—H1D0.80 (3)
C1—H1A0.99 (2)N1—H1E0.89 (2)
C1—H1B0.96 (2)
N1—C1—C1i109.68 (18)C1—N1—H1C108.8 (13)
N1—C1—H1A107.3 (12)C1—N1—H1D114.8 (16)
C1i—C1—H1A109.4 (13)H1C—N1—H1D104 (2)
N1—C1—H1B105.1 (13)C1—N1—H1E110.4 (15)
C1i—C1—H1B112.8 (13)H1C—N1—H1E116 (2)
H1A—C1—H1B112.3 (17)H1D—N1—H1E102 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1E···Cl10.89 (2)2.27 (2)3.1514 (15)175 (2)
N1—H1D···Cl1ii0.80 (3)2.39 (3)3.1770 (15)170 (2)
N1—H1C···Cl1iii0.91 (2)2.29 (2)3.1922 (15)171 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1E⋯Cl10.89 (2)2.27 (2)3.1514 (15)175 (2)
N1—H1D⋯Cl1i0.80 (3)2.39 (3)3.1770 (15)170 (2)
N1—H1C⋯Cl1ii0.91 (2)2.29 (2)3.1922 (15)171 (2)

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Vicinal diamino functionalities as privileged structural elements in biologically active compounds and exploitation of their synthetic chemistry.

Authors:  S R S Saibabu Kotti; Cody Timmons; Guigen Li
Journal:  Chem Biol Drug Des       Date:  2006-02       Impact factor: 2.817

  2 in total
  2 in total

1.  On the correction of calculated vibrational frequencies for the effects of the counterions - α,ω-diamine dihydrochlorides.

Authors:  S M Fiuza; T M Silva; M P M Marques; L A E Batista de Carvalho; A M Amado
Journal:  J Mol Model       Date:  2015-09-19       Impact factor: 1.810

2.  Butane-1,4-diammonium bis(perchlorate).

Authors:  Charmaine Arderne; Gert J Kruger
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-07
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.