Literature DB >> 21583195

N,N'-(Phenyl-imino-dimethyl-ene)di-prop-2-enamide hemihydrate.

Dhanapal Tamilvendan, Ganesan Venkatesa Prabhu, Frank R Fronczek, Nagarajan Vembu.   

Abstract

In the title compound, C(14)H(17)N(3)O(2)·0.5H(2)O, the asymmetric unit consists of an N,N'-(phenyl-imino-dimethyl-ene)diprop-2-enamide mol-ecule and one half-mol-ecule of water, with the O atom of the latter having 2 site symmetry. The supra-molecular architecture is framed by the inter-play of two-dimensional networks of both O-H⋯O and N-H⋯O inter-actions supported by C-H⋯O and edge-to-face C-H⋯π inter-actions.

Entities:  

Year:  2009        PMID: 21583195      PMCID: PMC2969719          DOI: 10.1107/S1600536809017784

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a detailed description of Mannich bases and their applications, see: Friedrich et al. (1991 ▶); Bohme & Mannich (1955 ▶); Afsah et al. (2008 ▶); Terzioglu et al. (2006 ▶); Ravichandran et al. (2007 ▶); Pandeya et al. (2000 ▶). For hydrogen bonds, see: Desiraju & Steiner (1999 ▶); Jeffrey (1997 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶); Etter (1990 ▶).

Experimental

Crystal data

C14H17N3O2·0.5H2O M = 268.31 Orthorhombic, a = 17.074 (2) Å b = 9.8366 (15) Å c = 16.316 (2) Å V = 2740.3 (6) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 90 K 0.30 × 0.23 × 0.12 mm

Data collection

Nonius KappaCCD diffractometer with an Oxford Cryosystems Cryostream cooler Absorption correction: none 9467 measured reflections 5065 independent reflections 3885 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.120 S = 1.02 5065 reflections 249 parameters All H-atom parameters refined Δρmax = 0.39 e Å−3 Δρmin = −0.28 e Å−3 Data collection: COLLECT (Nonius, 2000 ▶); cell refinement: DENZO and SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809017784/lh2820sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809017784/lh2820Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H17N3O2·0.5H2ODx = 1.301 Mg m3
Mr = 268.31Melting point: 398 K
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 34434 reflections
a = 17.074 (2) Åθ = 2.5–33.0°
b = 9.8366 (15) ŵ = 0.09 mm1
c = 16.316 (2) ÅT = 90 K
V = 2740.3 (6) Å3Fragment, colorless
Z = 80.30 × 0.23 × 0.12 mm
F(000) = 1144
Nonius KappaCCD diffractometer with an Oxford Cryosystems Cryostream cooler3885 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.030
graphiteθmax = 33.0°, θmin = 2.7°
ω and φ scansh = −26→26
9467 measured reflectionsk = −15→15
5065 independent reflectionsl = −24→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: difference Fourier map
wR(F2) = 0.120All H-atom parameters refined
S = 1.02w = 1/[σ2(Fo2) + (0.0597P)2 + 0.7128P] where P = (Fo2 + 2Fc2)/3
5065 reflections(Δ/σ)max = 0.001
249 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.28 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.80007 (5)0.89440 (8)0.13232 (5)0.01594 (16)
C20.88056 (6)0.84769 (10)0.12071 (6)0.01569 (17)
N30.89921 (5)0.80690 (8)0.03825 (5)0.01545 (16)
C40.91579 (6)0.66584 (10)0.02225 (6)0.01665 (18)
N50.85082 (5)0.59623 (8)−0.01804 (5)0.01671 (16)
C60.85921 (6)0.52348 (9)−0.08750 (6)0.01635 (18)
O70.92364 (4)0.50903 (8)−0.12139 (5)0.02232 (17)
C80.78566 (6)0.46251 (11)−0.11941 (6)0.0210 (2)
C90.78569 (7)0.37886 (13)−0.18250 (7)0.0267 (2)
C100.73876 (5)0.80842 (9)0.13486 (5)0.01421 (17)
O110.74626 (4)0.68455 (7)0.12367 (4)0.01761 (15)
C120.66234 (6)0.87457 (10)0.15303 (6)0.01837 (19)
C130.59676 (6)0.80534 (12)0.16321 (7)0.0247 (2)
C140.90493 (5)0.90267 (10)−0.02424 (6)0.01502 (17)
C150.91823 (5)0.86297 (11)−0.10565 (6)0.01785 (19)
C160.92620 (6)0.96063 (12)−0.16649 (6)0.0226 (2)
C170.92139 (6)1.09817 (12)−0.14964 (7)0.0249 (2)
C180.90668 (6)1.13762 (11)−0.06939 (7)0.0229 (2)
C190.89752 (6)1.04206 (10)−0.00757 (7)0.01868 (19)
OW1.00000.37093 (12)−0.25000.0356 (3)
H10.7899 (9)0.9829 (15)0.1371 (9)0.028 (4)*
H2A0.8901 (7)0.7705 (14)0.1559 (8)0.018 (3)*
H2B0.9140 (7)0.9206 (14)0.1393 (8)0.015 (3)*
H4A0.9616 (8)0.6566 (13)−0.0140 (8)0.018 (3)*
H4B0.9274 (7)0.6225 (13)0.0743 (8)0.017 (3)*
H50.8046 (9)0.6058 (14)0.0045 (9)0.027 (3)*
H80.7378 (9)0.4864 (15)−0.0914 (10)0.035 (4)*
H9A0.7377 (8)0.3357 (15)−0.2005 (9)0.029 (4)*
H9B0.8348 (9)0.3542 (15)−0.2119 (10)0.036 (4)*
H120.6636 (9)0.9714 (16)0.1589 (10)0.034 (4)*
H13A0.5471 (8)0.8504 (15)0.1751 (8)0.027 (3)*
H13B0.5952 (10)0.7040 (19)0.1577 (11)0.045 (5)*
H150.9212 (7)0.7696 (15)−0.1208 (8)0.018 (3)*
H160.9353 (9)0.9338 (15)−0.2219 (9)0.031 (4)*
H170.9294 (9)1.1688 (16)−0.1936 (10)0.038 (4)*
H180.9027 (8)1.2309 (16)−0.0557 (9)0.029 (4)*
H190.8871 (8)1.0736 (14)0.0458 (9)0.022 (3)*
HW1.0232 (10)0.4232 (17)−0.2832 (11)0.048 (5)*
U11U22U33U12U13U23
N10.0168 (4)0.0121 (3)0.0189 (4)−0.0001 (3)0.0009 (3)−0.0017 (3)
C20.0163 (4)0.0169 (4)0.0138 (4)0.0001 (3)−0.0014 (3)−0.0017 (3)
N30.0195 (4)0.0131 (3)0.0137 (3)0.0013 (3)0.0007 (3)−0.0011 (3)
C40.0184 (4)0.0141 (4)0.0175 (4)0.0024 (3)−0.0011 (3)−0.0010 (3)
N50.0166 (4)0.0167 (4)0.0168 (4)−0.0006 (3)0.0038 (3)−0.0035 (3)
C60.0181 (4)0.0153 (4)0.0157 (4)0.0014 (3)0.0026 (3)−0.0010 (3)
O70.0176 (3)0.0259 (4)0.0235 (4)0.0004 (3)0.0054 (3)−0.0080 (3)
C80.0177 (4)0.0243 (5)0.0210 (5)−0.0002 (4)0.0027 (3)−0.0048 (4)
C90.0219 (5)0.0343 (6)0.0241 (5)0.0014 (4)−0.0020 (4)−0.0094 (4)
C100.0172 (4)0.0133 (4)0.0122 (4)−0.0002 (3)−0.0010 (3)0.0001 (3)
O110.0213 (3)0.0118 (3)0.0197 (3)0.0002 (2)0.0004 (3)−0.0009 (2)
C120.0191 (4)0.0148 (4)0.0212 (5)0.0011 (3)0.0008 (3)−0.0012 (3)
C130.0204 (5)0.0241 (5)0.0294 (5)−0.0018 (4)0.0037 (4)−0.0072 (4)
C140.0119 (4)0.0163 (4)0.0169 (4)−0.0010 (3)−0.0011 (3)0.0011 (3)
C150.0154 (4)0.0199 (5)0.0182 (4)0.0000 (3)0.0031 (3)0.0010 (4)
C160.0184 (4)0.0305 (6)0.0189 (5)−0.0014 (4)0.0038 (4)0.0055 (4)
C170.0208 (5)0.0264 (5)0.0274 (5)−0.0039 (4)0.0000 (4)0.0116 (4)
C180.0206 (5)0.0177 (5)0.0305 (6)−0.0034 (3)−0.0044 (4)0.0054 (4)
C190.0180 (4)0.0164 (4)0.0216 (5)−0.0016 (3)−0.0032 (3)−0.0002 (3)
OW0.0567 (8)0.0170 (5)0.0330 (7)0.0000.0289 (6)0.000
N1—C101.3465 (12)C10—O111.2387 (11)
N1—C21.4613 (13)C10—C121.4878 (14)
N1—H10.891 (15)C12—C131.3210 (15)
C2—N31.4397 (12)C12—H120.957 (16)
C2—H2A0.966 (13)C13—H13A0.976 (14)
C2—H2B0.966 (13)C13—H13B1.001 (19)
N3—C141.3915 (12)C14—C151.4030 (14)
N3—C41.4400 (12)C14—C191.4036 (14)
C4—N51.4599 (12)C15—C161.3880 (14)
C4—H4A0.984 (13)C15—H150.953 (14)
C4—H4B0.970 (13)C16—C171.3830 (17)
N5—C61.3480 (12)C16—H160.954 (15)
N5—H50.876 (15)C17—C181.3886 (17)
C6—O71.2394 (12)C17—H171.008 (16)
C6—C81.4859 (14)C18—C191.3876 (15)
C8—C91.3178 (15)C18—H180.947 (16)
C8—H80.966 (16)C19—H190.942 (14)
C9—H9A0.969 (14)OW—HW0.845 (17)
C9—H9B0.996 (16)
C10—N1—C2122.52 (8)H9A—C9—H9B117.4 (12)
C10—N1—H1117.3 (10)O11—C10—N1122.20 (9)
C2—N1—H1120.2 (10)O11—C10—C12123.38 (9)
N3—C2—N1114.64 (8)N1—C10—C12114.41 (8)
N3—C2—H2A107.4 (8)C13—C12—C10122.88 (9)
N1—C2—H2A109.2 (8)C13—C12—H12121.3 (9)
N3—C2—H2B111.7 (8)C10—C12—H12115.8 (9)
N1—C2—H2B106.4 (8)C12—C13—H13A121.8 (9)
H2A—C2—H2B107.3 (11)C12—C13—H13B121.6 (10)
C14—N3—C2120.77 (8)H13A—C13—H13B116.6 (13)
C14—N3—C4120.38 (8)N3—C14—C15121.10 (9)
C2—N3—C4118.78 (8)N3—C14—C19120.87 (9)
N3—C4—N5112.59 (8)C15—C14—C19118.03 (9)
N3—C4—H4A110.7 (7)C16—C15—C14120.02 (10)
N5—C4—H4A106.8 (7)C16—C15—H15118.5 (8)
N3—C4—H4B107.8 (8)C14—C15—H15121.5 (8)
N5—C4—H4B110.0 (8)C17—C16—C15121.95 (10)
H4A—C4—H4B108.8 (11)C17—C16—H16118.0 (9)
C6—N5—C4123.15 (8)C15—C16—H16120.1 (9)
C6—N5—H5120.4 (10)C16—C17—C18118.13 (10)
C4—N5—H5116.4 (9)C16—C17—H17121.7 (9)
O7—C6—N5122.03 (9)C18—C17—H17120.2 (9)
O7—C6—C8123.19 (9)C19—C18—C17121.10 (10)
N5—C6—C8114.78 (8)C19—C18—H18118.4 (9)
C9—C8—C6121.70 (9)C17—C18—H18120.5 (9)
C9—C8—H8121.4 (9)C18—C19—C14120.72 (10)
C6—C8—H8116.9 (9)C18—C19—H19118.1 (8)
C8—C9—H9A120.7 (9)C14—C19—H19121.2 (8)
C8—C9—H9B121.9 (9)
C10—N1—C2—N375.00 (12)N1—C10—C12—C13−175.46 (10)
N1—C2—N3—C1470.15 (11)C2—N3—C14—C15−175.96 (8)
N1—C2—N3—C4−112.95 (9)C4—N3—C14—C157.19 (13)
C14—N3—C4—N5−78.90 (10)C2—N3—C14—C194.02 (13)
C2—N3—C4—N5104.19 (10)C4—N3—C14—C19−172.83 (8)
N3—C4—N5—C6127.89 (10)N3—C14—C15—C16−177.94 (9)
C4—N5—C6—O71.15 (15)C19—C14—C15—C162.09 (13)
C4—N5—C6—C8−179.03 (9)C14—C15—C16—C17−0.07 (15)
O7—C6—C8—C95.99 (17)C15—C16—C17—C18−1.19 (16)
N5—C6—C8—C9−173.83 (11)C16—C17—C18—C190.39 (15)
C2—N1—C10—O11−3.45 (14)C17—C18—C19—C141.67 (15)
C2—N1—C10—C12175.89 (8)N3—C14—C19—C18177.14 (9)
O11—C10—C12—C133.88 (16)C15—C14—C19—C18−2.88 (14)
D—H···AD—HH···AD···AD—H···A
N5—H5···O110.876 (15)2.318 (15)3.0476 (11)140.8 (12)
C4—H4A···O70.984 (13)2.366 (13)2.8089 (12)106.5 (9)
C15—H15···O70.953 (14)2.563 (14)3.4922 (14)165.1 (10)
OW—HW···O7i0.845 (17)1.990 (17)2.8193 (9)166.7 (16)
N1—H1···O11ii0.891 (15)2.089 (15)2.9651 (11)167.4 (14)
C2—H2B···Cg1iii0.966 (13)3.1783.874130.40
C8—H8···Cg1iv0.966 (16)2.5713.444150.57
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N5—H5⋯O110.876 (15)2.318 (15)3.0476 (11)140.8 (12)
C4—H4A⋯O70.984 (13)2.366 (13)2.8089 (12)106.5 (9)
C15—H15⋯O70.953 (14)2.563 (14)3.4922 (14)165.1 (10)
OW—HW⋯O7i0.845 (17)1.990 (17)2.8193 (9)166.7 (16)
N1—H1⋯O11ii0.891 (15)2.089 (15)2.9651 (11)167.4 (14)
C2—H2BCg1iii0.966 (13)3.1783.874130.40
C8—H8⋯Cg1iv0.966 (16)2.571 (15)3.4444 (12)150.6 (13)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) . Cg1 is the centroid of the C14–C19 ring.

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