Literature DB >> 21583186

1,1',2,2'-Tetra-methyl-3,3'-(4-methoxy-benzyl-idene)di-1H-indole.

Cai-Li Zhang1, Ping-Ping Ye, Zhi-Qiang Du.   

Abstract

The title compound, C(28)H(28)N(2)O, was prepared by condensation of 1,2-bimethyl-indole and 4-methoxy-benzaldehyde. In the mol-ecular structure, the plane of the non-fused benzene ring is twisted with respect to the planes of the two indole ring systems, exhibiting dihedral angles of 72.04 (7) and 72.24 (7)°, while the planes of the two indole ring systems are oriented at a dihedral angle of 87.05 (5)°. Neither hydrogen bonding nor π-π stacking is observed in the crystal structure.

Entities:  

Year:  2009        PMID: 21583186      PMCID: PMC2969556          DOI: 10.1107/S1600536809017759

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the physiological properties of indole derivatives, see: Poter et al. (1977 ▶); Sundberg (1996 ▶). For related structures, see: Chang et al. (1999 ▶); Ge et al. (1999 ▶); Morris & Andersen (1990 ▶); Azizian et al. (2007 ▶); Osawa & Namiki (1983 ▶). For the synthesis, see: Deb & Bhuyan (2006 ▶).

Experimental

Crystal data

C28H28N2O M = 408.52 Monoclinic, a = 10.6647 (8) Å b = 13.2088 (10) Å c = 16.1494 (13) Å β = 97.1740 (10)° V = 2257.1 (3) Å3 Z = 4 Mo Kα radiation μ = 0.07 mm−1 T = 296 K 0.25 × 0.24 × 0.21 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: none 11505 measured reflections 3955 independent reflections 3196 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.139 S = 0.83 3955 reflections 285 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809017759/xu2523sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809017759/xu2523Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H28N2OF(000) = 872
Mr = 408.52Dx = 1.202 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6354 reflections
a = 10.6647 (8) Åθ = 4.9–51.2°
b = 13.2088 (10) ŵ = 0.07 mm1
c = 16.1494 (13) ÅT = 296 K
β = 97.174 (1)°Prism, colorless
V = 2257.1 (3) Å30.25 × 0.24 × 0.21 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3196 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.025
graphiteθmax = 25.0°, θmin = 2.0°
φ and ω scansh = −12→12
11505 measured reflectionsk = −15→15
3955 independent reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139H-atom parameters constrained
S = 0.83w = 1/[σ2(Fo2) + (0.1047P)2 + 0.8752P] where P = (Fo2 + 2Fc2)/3
3955 reflections(Δ/σ)max < 0.001
285 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.63286 (14)0.32330 (11)0.89904 (8)0.0421 (4)
N20.23060 (12)0.47645 (10)0.62297 (8)0.0358 (3)
O10.73808 (18)0.09952 (13)0.43460 (10)0.0827 (5)
C10.54764 (14)0.35901 (11)0.67122 (9)0.0316 (3)
H10.59370.42260.66710.038*
C20.59177 (14)0.28915 (11)0.60516 (9)0.0334 (4)
C30.72045 (16)0.27569 (12)0.60290 (11)0.0403 (4)
H30.77760.30970.64140.048*
C40.76556 (18)0.21341 (14)0.54521 (12)0.0501 (5)
H40.85220.20660.54460.060*
C50.6831 (2)0.16106 (14)0.48826 (12)0.0529 (5)
C60.5550 (2)0.17324 (15)0.48860 (12)0.0544 (5)
H60.49840.13870.45020.065*
C70.51073 (17)0.23765 (13)0.54694 (11)0.0435 (4)
H70.42400.24600.54640.052*
C80.6598 (4)0.0526 (3)0.36972 (17)0.1146 (13)
H8A0.71070.01590.33490.172*
H8B0.61130.10310.33710.172*
H8C0.60360.00660.39270.172*
C90.58732 (14)0.32027 (11)0.75930 (9)0.0319 (3)
C100.62303 (14)0.21961 (11)0.78731 (10)0.0317 (3)
C110.63396 (15)0.12468 (12)0.74924 (10)0.0373 (4)
H110.61470.11770.69180.045*
C120.67336 (16)0.04226 (12)0.79772 (11)0.0423 (4)
H120.6806−0.02030.77240.051*
C130.70262 (16)0.05046 (13)0.88377 (11)0.0446 (4)
H130.7297−0.00650.91480.054*
C140.69222 (16)0.14123 (14)0.92376 (11)0.0428 (4)
H140.71170.14670.98130.051*
C150.65141 (14)0.22480 (12)0.87502 (10)0.0355 (4)
C160.59485 (15)0.38016 (12)0.82871 (10)0.0377 (4)
C170.6468 (2)0.35910 (17)0.98459 (12)0.0627 (6)
H17A0.66640.30301.02180.094*
H17B0.56930.39010.99600.094*
H17C0.71390.40790.99260.094*
C180.5666 (2)0.49042 (14)0.83534 (13)0.0561 (5)
H18A0.63900.52450.86380.084*
H18B0.49580.49920.86600.084*
H18C0.54670.51850.78040.084*
C190.40945 (14)0.38686 (11)0.65659 (9)0.0314 (3)
C200.30467 (14)0.32631 (11)0.67439 (9)0.0325 (4)
C210.29216 (16)0.22881 (12)0.70659 (10)0.0395 (4)
H210.36330.18910.72180.047*
C220.17413 (17)0.19248 (14)0.71551 (11)0.0455 (4)
H220.16590.12770.73680.055*
C230.06594 (17)0.25115 (15)0.69312 (12)0.0484 (4)
H23−0.01300.22490.70000.058*
C240.07467 (16)0.34710 (14)0.66114 (11)0.0438 (4)
H240.00280.38590.64580.053*
C250.19443 (15)0.38423 (12)0.65254 (9)0.0339 (4)
C260.36095 (14)0.47703 (11)0.62486 (9)0.0322 (3)
C270.14395 (17)0.55850 (14)0.59566 (12)0.0477 (4)
H27A0.08250.56540.63400.072*
H27B0.10180.54370.54100.072*
H27C0.19040.62060.59400.072*
C280.42723 (17)0.56692 (13)0.59485 (11)0.0440 (4)
H28A0.40490.62630.62400.066*
H28B0.40250.57560.53610.066*
H28C0.51690.55660.60510.066*
U11U22U33U12U13U23
N10.0508 (8)0.0427 (8)0.0313 (7)0.0060 (6)−0.0012 (6)−0.0044 (6)
N20.0330 (7)0.0350 (7)0.0386 (7)0.0063 (5)0.0018 (6)0.0039 (6)
O10.1152 (14)0.0747 (11)0.0624 (10)0.0308 (10)0.0278 (9)−0.0145 (8)
C10.0315 (8)0.0275 (8)0.0353 (8)−0.0008 (6)0.0018 (6)0.0037 (6)
C20.0382 (9)0.0299 (8)0.0324 (8)0.0016 (6)0.0052 (6)0.0063 (6)
C30.0371 (9)0.0382 (9)0.0457 (10)0.0028 (7)0.0058 (7)0.0039 (7)
C40.0499 (11)0.0477 (11)0.0557 (11)0.0115 (8)0.0177 (9)0.0075 (9)
C50.0758 (14)0.0434 (10)0.0417 (10)0.0161 (9)0.0160 (9)0.0026 (8)
C60.0690 (13)0.0507 (11)0.0416 (10)0.0012 (9)−0.0004 (9)−0.0076 (8)
C70.0432 (9)0.0474 (10)0.0390 (9)0.0005 (7)0.0012 (7)−0.0003 (8)
C80.173 (3)0.112 (2)0.0558 (15)0.059 (2)0.0022 (18)−0.0304 (16)
C90.0294 (7)0.0305 (8)0.0347 (8)0.0012 (6)−0.0007 (6)0.0008 (6)
C100.0281 (7)0.0323 (8)0.0339 (8)0.0007 (6)0.0008 (6)0.0018 (6)
C110.0414 (9)0.0336 (8)0.0366 (9)0.0005 (7)0.0037 (7)0.0017 (7)
C120.0446 (9)0.0316 (8)0.0514 (10)0.0054 (7)0.0089 (8)0.0044 (7)
C130.0410 (9)0.0411 (10)0.0516 (11)0.0064 (7)0.0047 (8)0.0156 (8)
C140.0398 (9)0.0508 (10)0.0366 (9)0.0029 (8)−0.0005 (7)0.0085 (8)
C150.0337 (8)0.0380 (9)0.0338 (8)0.0024 (7)0.0001 (6)0.0012 (7)
C160.0391 (9)0.0338 (9)0.0391 (9)0.0042 (7)0.0007 (7)−0.0020 (7)
C170.0839 (15)0.0651 (13)0.0362 (10)0.0102 (11)−0.0041 (10)−0.0105 (9)
C180.0727 (14)0.0391 (10)0.0550 (12)0.0119 (9)0.0018 (10)−0.0095 (9)
C190.0324 (8)0.0320 (8)0.0294 (8)0.0011 (6)0.0024 (6)0.0019 (6)
C200.0337 (8)0.0337 (8)0.0295 (8)0.0006 (6)0.0020 (6)0.0000 (6)
C210.0385 (9)0.0373 (9)0.0416 (9)−0.0008 (7)0.0011 (7)0.0051 (7)
C220.0453 (10)0.0423 (10)0.0485 (10)−0.0090 (8)0.0048 (8)0.0065 (8)
C230.0375 (9)0.0545 (11)0.0536 (11)−0.0099 (8)0.0079 (8)0.0008 (9)
C240.0338 (9)0.0490 (10)0.0481 (10)0.0024 (7)0.0030 (7)−0.0022 (8)
C250.0340 (8)0.0365 (8)0.0309 (8)0.0016 (6)0.0025 (6)−0.0013 (6)
C260.0335 (8)0.0326 (8)0.0305 (8)0.0023 (6)0.0036 (6)0.0012 (6)
C270.0435 (10)0.0446 (10)0.0535 (11)0.0141 (8)0.0003 (8)0.0048 (8)
C280.0461 (10)0.0368 (9)0.0492 (10)0.0022 (7)0.0069 (8)0.0103 (7)
N1—C151.379 (2)C12—H120.9300
N1—C161.380 (2)C13—C141.373 (3)
N1—C171.450 (2)C13—H130.9300
N2—C251.381 (2)C14—C151.394 (2)
N2—C261.3867 (19)C14—H140.9300
N2—C271.457 (2)C16—C181.494 (2)
O1—C51.372 (2)C17—H17A0.9600
O1—C81.401 (4)C17—H17B0.9600
C1—C191.509 (2)C17—H17C0.9600
C1—C91.521 (2)C18—H18A0.9600
C1—C21.529 (2)C18—H18B0.9600
C1—H10.9800C18—H18C0.9600
C2—C71.375 (2)C19—C261.372 (2)
C2—C31.389 (2)C19—C201.432 (2)
C3—C41.374 (2)C20—C211.401 (2)
C3—H30.9300C20—C251.410 (2)
C4—C51.377 (3)C21—C221.371 (2)
C4—H40.9300C21—H210.9300
C5—C61.376 (3)C22—C231.400 (3)
C6—C71.395 (3)C22—H220.9300
C6—H60.9300C23—C241.376 (3)
C7—H70.9300C23—H230.9300
C8—H8A0.9600C24—C251.391 (2)
C8—H8B0.9600C24—H240.9300
C8—H8C0.9600C26—C281.493 (2)
C9—C161.366 (2)C27—H27A0.9600
C9—C101.440 (2)C27—H27B0.9600
C10—C111.408 (2)C27—H27C0.9600
C10—C151.413 (2)C28—H28A0.9600
C11—C121.376 (2)C28—H28B0.9600
C11—H110.9300C28—H28C0.9600
C12—C131.390 (3)
C15—N1—C16108.65 (13)N1—C15—C14129.36 (15)
C15—N1—C17125.05 (15)N1—C15—C10107.91 (13)
C16—N1—C17126.26 (15)C14—C15—C10122.72 (15)
C25—N2—C26108.65 (12)C9—C16—N1109.97 (14)
C25—N2—C27124.55 (14)C9—C16—C18129.17 (16)
C26—N2—C27126.80 (14)N1—C16—C18120.86 (15)
C5—O1—C8118.2 (2)N1—C17—H17A109.5
C19—C1—C9112.38 (12)N1—C17—H17B109.5
C19—C1—C2114.70 (13)H17A—C17—H17B109.5
C9—C1—C2112.06 (12)N1—C17—H17C109.5
C19—C1—H1105.6H17A—C17—H17C109.5
C9—C1—H1105.6H17B—C17—H17C109.5
C2—C1—H1105.6C16—C18—H18A109.5
C7—C2—C3117.22 (15)C16—C18—H18B109.5
C7—C2—C1123.63 (14)H18A—C18—H18B109.5
C3—C2—C1119.15 (14)C16—C18—H18C109.5
C4—C3—C2121.69 (17)H18A—C18—H18C109.5
C4—C3—H3119.2H18B—C18—H18C109.5
C2—C3—H3119.2C26—C19—C20107.00 (13)
C5—C4—C3120.34 (18)C26—C19—C1125.84 (14)
C5—C4—H4119.8C20—C19—C1127.15 (13)
C3—C4—H4119.8C21—C20—C25118.45 (14)
O1—C5—C4115.59 (19)C21—C20—C19134.46 (14)
O1—C5—C6125.1 (2)C25—C20—C19107.09 (13)
C4—C5—C6119.35 (17)C22—C21—C20119.45 (16)
C5—C6—C7119.62 (18)C22—C21—H21120.3
C5—C6—H6120.2C20—C21—H21120.3
C7—C6—H6120.2C21—C22—C23121.13 (17)
C2—C7—C6121.77 (17)C21—C22—H22119.4
C2—C7—H7119.1C23—C22—H22119.4
C6—C7—H7119.1C24—C23—C22120.98 (16)
O1—C8—H8A109.5C24—C23—H23119.5
O1—C8—H8B109.5C22—C23—H23119.5
H8A—C8—H8B109.5C23—C24—C25117.91 (16)
O1—C8—H8C109.5C23—C24—H24121.0
H8A—C8—H8C109.5C25—C24—H24121.0
H8B—C8—H8C109.5N2—C25—C24130.18 (15)
C16—C9—C10106.89 (13)N2—C25—C20107.76 (13)
C16—C9—C1123.61 (14)C24—C25—C20122.07 (15)
C10—C9—C1129.50 (14)C19—C26—N2109.49 (13)
C11—C10—C15117.53 (14)C19—C26—C28129.77 (14)
C11—C10—C9135.90 (15)N2—C26—C28120.74 (13)
C15—C10—C9106.57 (13)N2—C27—H27A109.5
C12—C11—C10119.50 (15)N2—C27—H27B109.5
C12—C11—H11120.2H27A—C27—H27B109.5
C10—C11—H11120.2N2—C27—H27C109.5
C11—C12—C13121.45 (16)H27A—C27—H27C109.5
C11—C12—H12119.3H27B—C27—H27C109.5
C13—C12—H12119.3C26—C28—H28A109.5
C14—C13—C12121.14 (16)C26—C28—H28B109.5
C14—C13—H13119.4H28A—C28—H28B109.5
C12—C13—H13119.4C26—C28—H28C109.5
C13—C14—C15117.65 (16)H28A—C28—H28C109.5
C13—C14—H14121.2H28B—C28—H28C109.5
C15—C14—H14121.2
  4 in total

1.  Induction of apoptosis in MCF-7 cells by indole-3-carbinol is independent of p53 and bax.

Authors:  X Ge; F A Fares; S Yannai
Journal:  Anticancer Res       Date:  1999 Jul-Aug       Impact factor: 2.480

2.  Indole alkaloids from Balansia epichloë (Weese).

Authors:  J K Porter; C W Bacon; J D Robbins; D S Himmelsbach; H C Higman
Journal:  J Agric Food Chem       Date:  1976 Jan-Feb       Impact factor: 5.279

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Cytostatic and antiestrogenic effects of 2-(indol-3-ylmethyl)-3,3'-diindolylmethane, a major in vivo product of dietary indole-3-carbinol.

Authors:  Y C Chang; J Riby; G H Chang; B C Peng; G Firestone; L F Bjeldanes
Journal:  Biochem Pharmacol       Date:  1999-09-01       Impact factor: 5.858

  4 in total

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